EnhancerDB
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  3. vista28870[chr19:17667126-17667426]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28870[chr19:17667126-17667426]
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Tissue distribution of vista28870
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Transcription factor that possibly regulate vista28870[chr19:17667126-17667426]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17666077 17667472 POLR2A UCSC Txn Factor no Conserved 108395406
chr19 17667212 17667409 EGR1 UCSC Txn Factor no Conserved 108395420
chr19 17667124 17667127 MYB TRANSFAC yes 70819365
chr19 17667124 17667127 MYB TRANSFAC yes 112698783
chr19 17667136 17667139 MYB TRANSFAC yes 70819366
chr19 17667136 17667139 MYB TRANSFAC yes 112698784
chr19 17667140 17667153 TFAP2A JASPAR yes 70819367
chr19 17667140 17667153 TFAP2B JASPAR yes 70819368
chr19 17667140 17667153 TFAP2C JASPAR yes 70819369
chr19 17667140 17667153 TFAP2A JASPAR yes 112698785
chr19 17667140 17667153 TFAP2B JASPAR yes 112698786
chr19 17667140 17667153 TFAP2C JASPAR yes 112698787
chr19 17667145 17667163 ESR2 JASPAR yes 70819370
chr19 17667145 17667163 ESR2 JASPAR yes 112698788
chr19 17667145 17667165 PPARG JASPAR yes 70819371
chr19 17667145 17667165 PPARG JASPAR yes 112698789
chr19 17667146 17667164 ESR1 JASPAR yes 70819372
chr19 17667146 17667164 ESR1 JASPAR yes 112698790
chr19 17667148 17667152 LFA1 TRANSFAC yes 70819373
chr19 17667148 17667152 LFA1 TRANSFAC yes 112698791
chr19 17667179 17667193 GLIS3 JASPAR yes 70819374
chr19 17667179 17667193 ZIC1 JASPAR yes 70819375
chr19 17667179 17667193 GLIS3 JASPAR yes 112698792
chr19 17667179 17667193 ZIC1 JASPAR yes 112698793
chr19 17667179 17667194 ZIC4 JASPAR yes 70819376
chr19 17667179 17667194 ZIC4 JASPAR yes 112698794
chr19 17667188 17667202 TLX1 JASPAR yes 70819377
chr19 17667188 17667202 TLX1 JASPAR yes 112698795
chr19 17667194 17667209 TFAP2A JASPAR yes 70819378
chr19 17667194 17667209 TFAP2A JASPAR yes 112698796
chr19 17667195 17667210 HNF4A JASPAR yes 70819379
chr19 17667195 17667210 HNF4A JASPAR yes 112698797
chr19 17667196 17667211 TFAP2C JASPAR yes 70819380
chr19 17667196 17667211 TFAP2C JASPAR yes 112698798
chr19 17667213 17667216 MYB TRANSFAC yes 70819381
chr19 17667213 17667216 MYB TRANSFAC yes 112698799
chr19 17667225 17667244 REST JASPAR yes 70819382
chr19 17667225 17667244 REST JASPAR yes 112698800
chr19 17667240 17667249 THAP1 JASPAR yes 70819383
chr19 17667240 17667249 THAP1 JASPAR yes 112698801
chr19 17667245 17667259 PAX6 JASPAR yes 70819384
chr19 17667245 17667259 PAX6 JASPAR yes 112698802
chr19 17667262 17667277 TFAP2C JASPAR yes 70819385
chr19 17667262 17667277 TFAP2C JASPAR yes 112698803
chr19 17667282 17667297 NR2C2 JASPAR yes 70819386
chr19 17667282 17667297 NR2C2 JASPAR yes 112698804
chr19 17667288 17667297 THAP1 JASPAR yes 70819387
chr19 17667288 17667297 THAP1 JASPAR yes 112698805
chr19 17667316 17667334 ESR2 JASPAR yes 70819388
chr19 17667316 17667334 ESR2 JASPAR yes 112698806
chr19 17667318 17667330 TAL1 JASPAR yes 70819389
chr19 17667318 17667330 TAL1 JASPAR yes 112698807
chr19 17667320 17667330 NEUROG2 JASPAR yes 70819390
chr19 17667320 17667330 NEUROG2 JASPAR yes 112698808
chr19 17667320 17667332 TAL1 JASPAR yes 70819391
chr19 17667320 17667332 TAL1 JASPAR yes 112698809
chr19 17667324 17667330 YY1 JASPAR yes 70819392
chr19 17667324 17667330 YY1 JASPAR yes 112698810
chr19 17667330 17667343 ELF1 JASPAR yes 70819393
chr19 17667330 17667343 ELF1 JASPAR yes 112698811
chr19 17667331 17667343 EHF JASPAR yes 70819394
chr19 17667331 17667343 EHF JASPAR yes 112698812
chr19 17667331 17667344 ELF3 JASPAR yes 70819395
chr19 17667331 17667344 ELF3 JASPAR yes 112698813
chr19 17667332 17667343 ELF5 JASPAR yes 70819396
chr19 17667332 17667343 ELF5 JASPAR yes 112698814
chr19 17667333 17667339 PEA3 TRANSFAC yes 70819397
chr19 17667333 17667339 PEA3 TRANSFAC yes 112698815
chr19 17667333 17667343 ETV6 JASPAR yes 70819398
chr19 17667333 17667343 ETV6 JASPAR yes 112698816
chr19 17667333 17667344 ELK4 JASPAR yes 70819399
chr19 17667333 17667344 FLI1 JASPAR yes 70819400
chr19 17667333 17667344 ELK4 JASPAR yes 112698817
chr19 17667333 17667344 FLI1 JASPAR yes 112698818
chr19 17667334 17667342 EHF JASPAR yes 70819401
chr19 17667334 17667342 EHF JASPAR yes 112698819
chr19 17667335 17667342 SPI1 JASPAR yes 70819402
chr19 17667335 17667342 SPI1 JASPAR yes 112698820
chr19 17667340 17667346 ZNF354C JASPAR yes 70819403
chr19 17667340 17667346 ZNF354C JASPAR yes 112698821
chr19 17667365 17667369 LFA1 TRANSFAC yes 70819404
chr19 17667365 17667369 LFA1 TRANSFAC yes 112698822
chr19 17667426 17667436 NFATC3 JASPAR yes 70819405
chr19 17667426 17667436 NFATC3 JASPAR yes 112698823
SNP sites on vista28870[chr19:17667126-17667426]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28870[chr19:17667126-17667426]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17547420 17571613 - CTD-2521M24.10 ENSG00000269035.1 17571613 0.0 1.0 17220 4487
chr19 17566234 17571763 - NXNL1 ENSG00000171773.2 17571763 0.88 0.83 17221 4637
chr19 17579578 17616977 + SLC27A1 ENSG00000130304.12 17579578 0.77 1.0 17222 12452
chr19 17622438 17632097 + PGLS ENSG00000130313.2 17622438 0.55 0.99 17223 55312
chr19 17634110 17664648 + FAM129C ENSG00000167483.13 17634110 0.98 0.99 17224 66984
chr19 17666403 17693971 + COLGALT1 ENSG00000130309.6 17666403 0.71 1.0 17225 99277
Expression level of Genes
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miRNAs possibly regulated by vista28870[chr19:17667126-17667426]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results