EnhancerDB
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  3. vista28876[chr19:17961350-17961505]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28876[chr19:17961350-17961505]
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Tissue distribution of vista28876
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Transcription factor that possibly regulate vista28876[chr19:17961350-17961505]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 17961351 17961357 YY1 JASPAR yes 70819697
chr19 17961372 17961378 ESR1 TRANSFAC yes 70819698
chr19 17961373 17961390 RXRA JASPAR yes 70819699
chr19 17961374 17961378 ESR1 TRANSFAC yes 70819700
chr19 17961398 17961411 JUN JASPAR yes 70819701
chr19 17961425 17961438 SCRT2 JASPAR yes 70819702
chr19 17961429 17961439 TFAP4 JASPAR yes 70819703
chr19 17961441 17961454 ELF1 JASPAR yes 70819704
chr19 17961444 17961454 ERF JASPAR yes 70819705
chr19 17961444 17961454 ETS1 JASPAR yes 70819706
chr19 17961444 17961454 ETV6 JASPAR yes 70819707
chr19 17961444 17961454 GABPA JASPAR yes 70819708
chr19 17961444 17961455 ELK4 JASPAR yes 70819709
chr19 17961444 17961455 FLI1 JASPAR yes 70819710
chr19 17961445 17961453 EHF JASPAR yes 70819711
chr19 17961445 17961453 FEV JASPAR yes 70819712
chr19 17961446 17961453 SPI1 JASPAR yes 70819713
chr19 17961450 17961459 NFIX JASPAR yes 70819714
chr19 17961450 17961460 NFIA JASPAR yes 70819715
chr19 17961452 17961458 NFIC JASPAR yes 70819716
chr19 17961473 17961488 FOXP1 JASPAR yes 70819717
chr19 17961474 17961485 FOXP2 JASPAR yes 70819718
chr19 17961476 17961487 FOXA1 JASPAR yes 70819719
chr19 17961477 17961498 IRF1 JASPAR yes 70819720
chr19 17961479 17961494 PRDM1 JASPAR yes 70819721
chr19 17961479 17961494 STAT2 JASPAR yes 70819722
chr19 17961480 17961494 STAT1 JASPAR yes 70819723
chr19 17961481 17961493 IRF1 JASPAR yes 70819724
chr19 17961485 17961496 ELK4 JASPAR yes 70819725
chr19 17961485 17961496 FLI1 JASPAR yes 70819726
chr19 17961485 17961498 ELF3 JASPAR yes 70819727
chr19 17961486 17961496 ETV6 JASPAR yes 70819728
chr19 17961486 17961496 GABPA JASPAR yes 70819729
chr19 17961486 17961497 ELF5 JASPAR yes 70819730
chr19 17961486 17961498 EHF JASPAR yes 70819731
chr19 17961486 17961498 ELF1 JASPAR yes 70819732
chr19 17961486 17961498 ELF4 JASPAR yes 70819733
chr19 17961486 17961499 ELF1 JASPAR yes 70819734
chr19 17961487 17961494 SPI1 JASPAR yes 70819735
chr19 17961487 17961495 EHF JASPAR yes 70819736
chr19 17961487 17961495 FEV JASPAR yes 70819737
SNP sites on vista28876[chr19:17961350-17961505]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28876[chr19:17961350-17961505]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 17905637 17923891 + B3GNT3 ENSG00000179913.6 17905637 0.94 1.0 17229 44287
chr19 17927321 17932383 - INSL3 ENSG00000248099.3 17932383 0.92 1.0 17230 71033
chr19 17935589 17958880 - JAK3 ENSG00000105639.14 17958880 0.89 1.0 17231 97530
chr19 17970685 17974962 + RPL18A ENSG00000105640.8 17970685 0.74 0.99 17232 90820
chr19 17982782 18005983 + SLC5A5 ENSG00000105641.3 17982782 0.97 1.0 17233 78723
chr19 18043825 18054800 + CCDC124 ENSG00000007080.6 18043825 0.58 1.0 17234 17680
Expression level of Genes
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miRNAs possibly regulated by vista28876[chr19:17961350-17961505]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results