EnhancerDB
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  3. vista28879[chr19:18125171-18125343]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28879[chr19:18125171-18125343]
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Tissue distribution of vista28879
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Transcription factor that possibly regulate vista28879[chr19:18125171-18125343]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18125172 18125193 ZNF263 JASPAR yes 70819770
chr19 18125172 18125193 ZNF263 JASPAR yes 112712282
chr19 18125194 18125198 NFE TRANSFAC yes 70819771
chr19 18125194 18125198 NFE TRANSFAC yes 112712283
chr19 18125195 18125200 GATA2 JASPAR yes 70819772
chr19 18125195 18125200 GATA2 JASPAR yes 112712284
chr19 18125208 18125213 TFAP2A TRANSFAC yes 70819773
chr19 18125208 18125213 TFAP2A TRANSFAC yes 112712285
chr19 18125208 18125214 MZF1 JASPAR yes 70819774
chr19 18125208 18125214 MZF1 JASPAR yes 112712286
chr19 18125208 18125229 ZNF263 JASPAR yes 70819775
chr19 18125208 18125229 ZNF263 JASPAR yes 112712287
chr19 18125217 18125227 SP1 JASPAR yes 70819776
chr19 18125217 18125227 SP1 JASPAR yes 112712288
chr19 18125224 18125234 SP1 JASPAR yes 70819777
chr19 18125224 18125234 SP1 JASPAR yes 112712289
chr19 18125250 18125265 AR JASPAR yes 70819778
chr19 18125250 18125265 AR JASPAR yes 112712290
chr19 18125250 18125267 NR3C1 JASPAR yes 70819779
chr19 18125250 18125267 NR3C2 JASPAR yes 70819780
chr19 18125250 18125267 NR3C1 JASPAR yes 112712291
chr19 18125250 18125267 NR3C2 JASPAR yes 112712292
chr19 18125258 18125266 MEIS2 JASPAR yes 70819781
chr19 18125258 18125266 MEIS3 JASPAR yes 70819782
chr19 18125258 18125266 MEIS2 JASPAR yes 112712293
chr19 18125258 18125266 MEIS3 JASPAR yes 112712294
chr19 18125259 18125263 NFE TRANSFAC yes 70819783
chr19 18125259 18125263 NFE TRANSFAC yes 112712295
chr19 18125270 18125288 IRF2 JASPAR yes 70819784
chr19 18125270 18125288 IRF2 JASPAR yes 112712296
chr19 18125273 18125293 RREB1 JASPAR yes 70819785
chr19 18125273 18125293 RREB1 JASPAR yes 112712297
chr19 18125274 18125294 RREB1 JASPAR yes 70819786
chr19 18125274 18125294 RREB1 JASPAR yes 112712298
chr19 18125275 18125287 IRF1 JASPAR yes 70819787
chr19 18125275 18125287 IRF1 JASPAR yes 112712299
chr19 18125275 18125295 RREB1 JASPAR yes 70819788
chr19 18125275 18125295 RREB1 JASPAR yes 112712300
chr19 18125278 18125298 RREB1 JASPAR yes 70819789
chr19 18125278 18125298 RREB1 JASPAR yes 112712301
chr19 18125280 18125295 RUNX2 JASPAR yes 70819790
chr19 18125280 18125295 RUNX2 JASPAR yes 112712302
chr19 18125284 18125294 RUNX3 JASPAR yes 70819791
chr19 18125284 18125294 RUNX3 JASPAR yes 112712303
chr19 18125290 18125311 IRF1 JASPAR yes 70819792
chr19 18125290 18125311 IRF1 JASPAR yes 112712304
chr19 18125297 18125309 FOXI1 JASPAR yes 70819793
chr19 18125297 18125309 FOXI1 JASPAR yes 112712305
chr19 18125297 18125312 FOXP1 JASPAR yes 70819794
chr19 18125297 18125312 FOXP1 JASPAR yes 112712306
chr19 18125300 18125311 FOXA1 JASPAR yes 70819795
chr19 18125300 18125311 FOXA1 JASPAR yes 112712307
chr19 18125301 18125316 FOXP1 JASPAR yes 70819796
chr19 18125301 18125316 FOXP1 JASPAR yes 112712308
chr19 18125302 18125317 STAT2 JASPAR yes 70819797
chr19 18125302 18125317 STAT2 JASPAR yes 112712309
chr19 18125305 18125317 IRF1 JASPAR yes 70819798
chr19 18125305 18125317 IRF1 JASPAR yes 112712310
chr19 18125307 18125313 TCF4 TRANSFAC yes 70819799
chr19 18125307 18125313 TCF4 TRANSFAC yes 112712311
chr19 18125307 18125322 FOXP1 JASPAR yes 70819800
chr19 18125307 18125322 FOXP1 JASPAR yes 112712312
chr19 18125319 18125331 PROX1 JASPAR yes 70819801
chr19 18125319 18125331 PROX1 JASPAR yes 112712313
SNP sites on vista28879[chr19:18125171-18125343]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28879[chr19:18125171-18125343]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18043825 18054800 + CCDC124 ENSG00000007080.6 18043825 0.58 1.0 17234 18654
chr19 18062102 18110889 + KCNN1 ENSG00000105642.11 18062102 0.93 1.0 17235 36931
chr19 18111941 18124911 + ARRDC2 ENSG00000105643.5 18111941 0.8 1.0 17236 86770
chr19 18169805 18209754 - IL12RB1 ENSG00000096996.11 18209754 0.9 0.9 17237 15589
chr19 18208603 18262502 + MAST3 ENSG00000099308.6 18208603 0.77 1.0 17238 16740
Expression level of Genes
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miRNAs possibly regulated by vista28879[chr19:18125171-18125343]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results