EnhancerDB
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  3. vista28880[chr19:18128099-18128520]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28880[chr19:18128099-18128520]
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Tissue distribution of vista28880
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Transcription factor that possibly regulate vista28880[chr19:18128099-18128520]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18128351 18128711 NR3C1 UCSC Txn Factor no Conserved 108395712
chr19 18128133 18128153 ESR1 JASPAR yes 70819802
chr19 18128133 18128153 ESR1 JASPAR yes 112712699
chr19 18128137 18128155 ESR2 JASPAR yes 70819803
chr19 18128137 18128155 ESR2 JASPAR yes 112712700
chr19 18128138 18128153 ESR2 JASPAR yes 70819804
chr19 18128138 18128153 ESR2 JASPAR yes 112712701
chr19 18128139 18128143 ESR1 TRANSFAC yes 70819805
chr19 18128139 18128143 ESR1 TRANSFAC yes 112712702
chr19 18128193 18128199 MZF1 JASPAR yes 70819806
chr19 18128193 18128199 MZF1 JASPAR yes 112712703
chr19 18128212 18128233 ZNF263 JASPAR yes 70819807
chr19 18128212 18128233 ZNF263 JASPAR yes 112712704
chr19 18128225 18128233 EHF JASPAR yes 70819808
chr19 18128225 18128233 EHF JASPAR yes 112712705
chr19 18128227 18128234 SPIB JASPAR yes 70819809
chr19 18128227 18128234 SPIB JASPAR yes 112712706
chr19 18128231 18128246 TFAP2C JASPAR yes 70819810
chr19 18128231 18128246 TFAP2C JASPAR yes 112712707
chr19 18128233 18128248 TFAP2A JASPAR yes 70819811
chr19 18128233 18128248 TFAP2C JASPAR yes 70819812
chr19 18128233 18128248 TFAP2A JASPAR yes 112712708
chr19 18128233 18128248 TFAP2C JASPAR yes 112712709
chr19 18128234 18128245 TFAP2A JASPAR yes 70819813
chr19 18128234 18128245 TFAP2B JASPAR yes 70819814
chr19 18128234 18128245 TFAP2A JASPAR yes 112712710
chr19 18128234 18128245 TFAP2B JASPAR yes 112712711
chr19 18128248 18128269 ZNF263 JASPAR yes 70819815
chr19 18128248 18128269 ZNF263 JASPAR yes 112712712
chr19 18128251 18128262 FLI1 JASPAR yes 70819816
chr19 18128251 18128262 FLI1 JASPAR yes 112712713
chr19 18128257 18128278 REST JASPAR yes 70819817
chr19 18128257 18128278 REST JASPAR yes 112712714
chr19 18128258 18128277 REST JASPAR yes 70819818
chr19 18128258 18128277 REST JASPAR yes 112712715
chr19 18128289 18128303 RXRB JASPAR yes 70819819
chr19 18128289 18128303 RXRB JASPAR yes 112712716
chr19 18128292 18128301 Tf-LF1 TRANSFAC yes 70819820
chr19 18128292 18128301 Tf-LF1 TRANSFAC yes 112712717
chr19 18128317 18128335 SRF JASPAR yes 70819821
chr19 18128317 18128335 SRF JASPAR yes 112712718
chr19 18128319 18128335 SRF JASPAR yes 70819822
chr19 18128319 18128335 SRF JASPAR yes 112712719
chr19 18128324 18128338 GLIS3 JASPAR yes 70819823
chr19 18128324 18128338 GLIS3 JASPAR yes 112712720
chr19 18128330 18128340 NFKB1 JASPAR yes 70819824
chr19 18128330 18128340 NFKB1 JASPAR yes 112712721
chr19 18128330 18128341 NFKB1 JASPAR yes 70819825
chr19 18128330 18128341 NFKB1 JASPAR yes 112712722
chr19 18128333 18128348 TFAP2A JASPAR yes 70819826
chr19 18128333 18128348 TFAP2A JASPAR yes 112712723
chr19 18128334 18128338 H4TF2 TRANSFAC yes 70819827
chr19 18128334 18128338 H4TF2 TRANSFAC yes 112712724
chr19 18128335 18128350 TFAP2A JASPAR yes 70819828
chr19 18128335 18128350 TFAP2C JASPAR yes 70819829
chr19 18128335 18128350 TFAP2A JASPAR yes 112712725
chr19 18128335 18128350 TFAP2C JASPAR yes 112712726
chr19 18128336 18128347 EBF1 JASPAR yes 70819830
chr19 18128336 18128347 EBF1 JASPAR yes 112712727
chr19 18128337 18128346 TFAP2A JASPAR yes 70819831
chr19 18128337 18128346 TFAP2A JASPAR yes 112712728
chr19 18128341 18128346 SP1 TRANSFAC yes 70819832
chr19 18128341 18128346 SP1 TRANSFAC yes 112712729
chr19 18128352 18128359 SPIB JASPAR yes 70819833
chr19 18128352 18128359 SPIB JASPAR yes 112712730
chr19 18128404 18128412 FEV JASPAR yes 70819834
chr19 18128404 18128412 FEV JASPAR yes 112712731
chr19 18128416 18128420 YY1 TRANSFAC yes 70819835
chr19 18128416 18128420 YY1 TRANSFAC yes 112712732
chr19 18128488 18128492 YY1 TRANSFAC yes 70819836
chr19 18128488 18128492 YY1 TRANSFAC yes 112712733
chr19 18128505 18128515 GCM2 JASPAR yes 70819837
chr19 18128505 18128515 GCM2 JASPAR yes 112712734
chr19 18128505 18128516 GCM1 JASPAR yes 70819838
chr19 18128505 18128516 GCM1 JASPAR yes 112712735
SNP sites on vista28880[chr19:18128099-18128520]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28880[chr19:18128099-18128520]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18043825 18054800 + CCDC124 ENSG00000007080.6 18043825 0.58 1.0 17234 15726
chr19 18062102 18110889 + KCNN1 ENSG00000105642.11 18062102 0.93 1.0 17235 34003
chr19 18111941 18124911 + ARRDC2 ENSG00000105643.5 18111941 0.8 1.0 17236 83842
chr19 18169805 18209754 - IL12RB1 ENSG00000096996.11 18209754 0.9 0.9 17237 18766
chr19 18208603 18262502 + MAST3 ENSG00000099308.6 18208603 0.77 1.0 17238 19917
Expression level of Genes
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miRNAs possibly regulated by vista28880[chr19:18128099-18128520]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results