EnhancerDB
  1. Home
  2. Enhancers
  3. vista28888[chr19:18162301-18162691]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28888[chr19:18162301-18162691]
Back to top
Tissue distribution of vista28888
Back to top
Transcription factor that possibly regulate vista28888[chr19:18162301-18162691]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18162300 18162315 FOXP1 JASPAR yes 70820258
chr19 18162300 18162315 FOXP1 JASPAR yes 112716640
chr19 18162300 18162321 IRF1 JASPAR yes 70820259
chr19 18162300 18162321 IRF1 JASPAR yes 112716641
chr19 18162301 18162316 FOXP1 JASPAR yes 70820260
chr19 18162301 18162316 FOXP1 JASPAR yes 112716642
chr19 18162301 18162322 IRF1 JASPAR yes 70820261
chr19 18162301 18162322 IRF1 JASPAR yes 112716643
chr19 18162302 18162317 FOXP1 JASPAR yes 70820262
chr19 18162302 18162317 FOXP1 JASPAR yes 112716644
chr19 18162304 18162319 FOXP1 JASPAR yes 70820263
chr19 18162304 18162319 FOXP1 JASPAR yes 112716645
chr19 18162375 18162387 INSM1 JASPAR yes 70820264
chr19 18162375 18162387 INSM1 JASPAR yes 112716646
chr19 18162376 18162395 REST JASPAR yes 70820265
chr19 18162376 18162395 REST JASPAR yes 112716647
chr19 18162415 18162426 PROP1 JASPAR yes 70820266
chr19 18162415 18162426 PROP1 JASPAR yes 112716648
chr19 18162447 18162456 HIC2 JASPAR yes 70820267
chr19 18162447 18162456 HIC2 JASPAR yes 112716649
chr19 18162450 18162454 LFA1 TRANSFAC yes 70820268
chr19 18162450 18162454 LFA1 TRANSFAC yes 112716650
chr19 18162472 18162482 TBR1 JASPAR yes 70820269
chr19 18162472 18162482 TBR1 JASPAR yes 112716651
chr19 18162472 18162483 TBX20 JASPAR yes 70820270
chr19 18162472 18162483 TBX2 JASPAR yes 70820271
chr19 18162472 18162483 TBX20 JASPAR yes 112716652
chr19 18162472 18162483 TBX2 JASPAR yes 112716653
chr19 18162473 18162483 TBX21 JASPAR yes 70820272
chr19 18162473 18162483 TBX21 JASPAR yes 112716654
chr19 18162490 18162504 EBF1 JASPAR yes 70820273
chr19 18162490 18162504 EBF1 JASPAR yes 112716655
chr19 18162490 18162505 ZIC3 JASPAR yes 70820274
chr19 18162490 18162505 ZIC4 JASPAR yes 70820275
chr19 18162490 18162505 ZIC3 JASPAR yes 112716656
chr19 18162490 18162505 ZIC4 JASPAR yes 112716657
chr19 18162491 18162505 GLIS2 JASPAR yes 70820276
chr19 18162491 18162505 GLIS3 JASPAR yes 70820277
chr19 18162491 18162505 ZIC1 JASPAR yes 70820278
chr19 18162491 18162505 GLIS2 JASPAR yes 112716658
chr19 18162491 18162505 GLIS3 JASPAR yes 112716659
chr19 18162491 18162505 ZIC1 JASPAR yes 112716660
chr19 18162502 18162512 HMBOX1 JASPAR yes 70820279
chr19 18162502 18162512 HMBOX1 JASPAR yes 112716661
chr19 18162504 18162507 MYB TRANSFAC yes 70820280
chr19 18162504 18162507 MYB TRANSFAC yes 112716662
chr19 18162521 18162531 MZF1 JASPAR yes 70820281
chr19 18162521 18162531 MZF1 JASPAR yes 112716663
chr19 18162524 18162529 TFAP2A TRANSFAC yes 70820282
chr19 18162524 18162529 TFAP2A TRANSFAC yes 112716664
chr19 18162524 18162530 MZF1 JASPAR yes 70820283
chr19 18162524 18162530 MZF1 JASPAR yes 112716665
chr19 18162563 18162568 MYC TRANSFAC yes 70820284
chr19 18162563 18162568 MYC TRANSFAC yes 112716666
chr19 18162566 18162585 REST JASPAR yes 70820285
chr19 18162566 18162585 REST JASPAR yes 112716667
chr19 18162613 18162628 ESR2 JASPAR yes 70820286
chr19 18162613 18162628 ESR2 JASPAR yes 112716668
chr19 18162618 18162631 NR2F1 JASPAR yes 70820287
chr19 18162618 18162631 NR2F1 JASPAR yes 112716669
chr19 18162620 18162631 ESRRA JASPAR yes 70820288
chr19 18162620 18162631 ESRRA JASPAR yes 112716670
chr19 18162621 18162636 HNF4A JASPAR yes 70820289
chr19 18162621 18162636 HNF4A JASPAR yes 112716671
chr19 18162622 18162636 NR2F1 JASPAR yes 70820290
chr19 18162622 18162636 RXRB JASPAR yes 70820291
chr19 18162622 18162636 RXRG JASPAR yes 70820292
chr19 18162622 18162636 NR2F1 JASPAR yes 112716672
chr19 18162622 18162636 RXRB JASPAR yes 112716673
chr19 18162622 18162636 RXRG JASPAR yes 112716674
chr19 18162622 18162637 HNF4G JASPAR yes 70820293
chr19 18162622 18162637 HNF4G JASPAR yes 112716675
chr19 18162632 18162638 SP1 TRANSFAC yes 70820294
chr19 18162632 18162638 SP1 TRANSFAC yes 112716676
chr19 18162661 18162668 SP1 TRANSFAC yes 70820295
chr19 18162661 18162668 SP1 TRANSFAC yes 112716677
chr19 18162662 18162667 SP1 TRANSFAC yes 70820296
chr19 18162662 18162667 SP1 TRANSFAC yes 112716678
chr19 18162662 18162668 SP1 TRANSFAC yes 70820297
chr19 18162662 18162668 SP1 TRANSFAC yes 112716679
chr19 18162662 18162683 ZNF263 JASPAR yes 70820298
chr19 18162662 18162683 ZNF263 JASPAR yes 112716680
chr19 18162665 18162675 SP1 JASPAR yes 70820299
chr19 18162665 18162675 SP1 JASPAR yes 112716681
chr19 18162665 18162686 ZNF263 JASPAR yes 70820300
chr19 18162665 18162686 ZNF263 JASPAR yes 112716682
chr19 18162668 18162689 ZNF263 JASPAR yes 70820301
chr19 18162668 18162689 ZNF263 JASPAR yes 112716683
chr19 18162674 18162694 RREB1 JASPAR yes 70820302
chr19 18162674 18162694 RREB1 JASPAR yes 112716684
chr19 18162678 18162698 RREB1 JASPAR yes 70820303
chr19 18162678 18162698 RREB1 JASPAR yes 112716685
chr19 18162679 18162689 SP1 JASPAR yes 70820304
chr19 18162679 18162689 SP1 JASPAR yes 112716686
chr19 18162682 18162694 INSM1 JASPAR yes 70820305
chr19 18162682 18162694 INSM1 JASPAR yes 112716687
chr19 18162690 18162697 SP1 TRANSFAC yes 70820306
chr19 18162690 18162697 SP1 TRANSFAC yes 112716688
SNP sites on vista28888[chr19:18162301-18162691]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28888[chr19:18162301-18162691]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18111941 18124911 + ARRDC2 ENSG00000105643.5 18111941 0.8 1.0 17236 49640
chr19 18169805 18209754 - IL12RB1 ENSG00000096996.11 18209754 0.9 0.9 17237 52937
chr19 18208603 18262502 + MAST3 ENSG00000099308.6 18208603 0.77 1.0 17238 54088
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28888[chr19:18162301-18162691]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results