EnhancerDB
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  3. vista28892[chr19:18230044-18230277]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28892[chr19:18230044-18230277]
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Tissue distribution of vista28892
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Transcription factor that possibly regulate vista28892[chr19:18230044-18230277]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18230126 18230367 RUNX3 UCSC Txn Factor no Conserved 108396270
chr19 18230045 18230056 E2F6 JASPAR yes 70820514
chr19 18230045 18230056 E2F6 JASPAR yes 112719901
chr19 18230047 18230055 SP1 TRANSFAC yes 70820515
chr19 18230047 18230055 SP1 TRANSFAC yes 112719902
chr19 18230049 18230055 MAZ TRANSFAC yes 70820516
chr19 18230049 18230055 MAZ TRANSFAC yes 112719903
chr19 18230053 18230057 LFA1 TRANSFAC yes 70820517
chr19 18230053 18230057 LFA1 TRANSFAC yes 112719904
chr19 18230095 18230106 NFE2L2 JASPAR yes 70820518
chr19 18230095 18230106 NFE2L2 JASPAR yes 112719905
chr19 18230112 18230118 MAZ TRANSFAC yes 70820519
chr19 18230112 18230118 MAZ TRANSFAC yes 112719906
chr19 18230112 18230123 E2F6 JASPAR yes 70820520
chr19 18230112 18230123 E2F6 JASPAR yes 112719907
chr19 18230114 18230122 SP1 TRANSFAC yes 70820521
chr19 18230114 18230122 SP1 TRANSFAC yes 112719908
chr19 18230114 18230124 SP1 JASPAR yes 70820522
chr19 18230114 18230124 SP1 JASPAR yes 112719909
chr19 18230116 18230122 MAZ TRANSFAC yes 70820523
chr19 18230116 18230122 MAZ TRANSFAC yes 112719910
chr19 18230153 18230162 ZEB1 JASPAR yes 70820524
chr19 18230153 18230162 ZEB1 JASPAR yes 112719911
chr19 18230154 18230175 ZNF263 JASPAR yes 70820525
chr19 18230154 18230175 ZNF263 JASPAR yes 112719912
chr19 18230160 18230170 SP1 JASPAR yes 70820526
chr19 18230160 18230170 SP1 JASPAR yes 112719913
chr19 18230160 18230181 ZNF263 JASPAR yes 70820527
chr19 18230160 18230181 ZNF263 JASPAR yes 112719914
chr19 18230170 18230177 PEA3 TRANSFAC yes 70820528
chr19 18230170 18230177 PEA3 TRANSFAC yes 112719915
chr19 18230177 18230190 SMAD2 JASPAR yes 70820529
chr19 18230177 18230190 SMAD2 JASPAR yes 112719916
chr19 18230183 18230203 ESR1 JASPAR yes 70820530
chr19 18230183 18230203 ESR1 JASPAR yes 112719917
chr19 18230187 18230196 ZEB1 JASPAR yes 70820531
chr19 18230187 18230196 ZEB1 JASPAR yes 112719918
chr19 18230209 18230215 NFIC JASPAR yes 70820532
chr19 18230209 18230215 NFIC JASPAR yes 112719919
chr19 18230212 18230223 FLI1 JASPAR yes 70820533
chr19 18230212 18230223 FLI1 JASPAR yes 112719920
chr19 18230213 18230221 EHF JASPAR yes 70820534
chr19 18230213 18230221 FEV JASPAR yes 70820535
chr19 18230213 18230221 EHF JASPAR yes 112719921
chr19 18230213 18230221 FEV JASPAR yes 112719922
chr19 18230214 18230221 SPI1 JASPAR yes 70820536
chr19 18230214 18230221 SPI1 JASPAR yes 112719923
chr19 18230226 18230241 SCRT1 JASPAR yes 70820537
chr19 18230226 18230241 SCRT1 JASPAR yes 112719924
chr19 18230228 18230241 SCRT2 JASPAR yes 70820538
chr19 18230228 18230241 SCRT2 JASPAR yes 112719925
chr19 18230232 18230250 IRF2 JASPAR yes 70820539
chr19 18230232 18230250 IRF2 JASPAR yes 112719926
chr19 18230233 18230254 IRF1 JASPAR yes 70820540
chr19 18230233 18230254 IRF1 JASPAR yes 112719927
chr19 18230235 18230250 PRDM1 JASPAR yes 70820541
chr19 18230235 18230250 STAT2 JASPAR yes 70820542
chr19 18230235 18230250 PRDM1 JASPAR yes 112719928
chr19 18230235 18230250 STAT2 JASPAR yes 112719929
chr19 18230236 18230250 STAT1 JASPAR yes 70820543
chr19 18230236 18230250 STAT1 JASPAR yes 112719930
chr19 18230237 18230249 IRF1 JASPAR yes 70820544
chr19 18230237 18230249 IRF1 JASPAR yes 112719931
chr19 18230237 18230251 IRF7 JASPAR yes 70820545
chr19 18230237 18230251 IRF8 JASPAR yes 70820546
chr19 18230237 18230251 IRF7 JASPAR yes 112719932
chr19 18230237 18230251 IRF8 JASPAR yes 112719933
chr19 18230237 18230252 IRF9 JASPAR yes 70820547
chr19 18230237 18230252 IRF9 JASPAR yes 112719934
chr19 18230239 18230260 IRF1 JASPAR yes 70820548
chr19 18230239 18230260 IRF1 JASPAR yes 112719935
chr19 18230241 18230256 STAT2 JASPAR yes 70820549
chr19 18230241 18230256 STAT2 JASPAR yes 112719936
chr19 18230243 18230255 IRF1 JASPAR yes 70820550
chr19 18230243 18230255 IRF1 JASPAR yes 112719937
chr19 18230263 18230276 SMAD2 JASPAR yes 70820551
chr19 18230263 18230276 SMAD2 JASPAR yes 112719938
chr19 18230275 18230291 SOX4 JASPAR yes 70820552
chr19 18230275 18230291 SOX4 JASPAR yes 112719939
SNP sites on vista28892[chr19:18230044-18230277]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28892[chr19:18230044-18230277]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18169805 18209754 - IL12RB1 ENSG00000096996.11 18209754 0.9 0.9 17237 79710
chr19 18208603 18262502 + MAST3 ENSG00000099308.6 18208603 0.77 1.0 17238 78559
chr19 18263928 18281350 + PIK3R2 ENSG00000105647.10 18263928 0.68 0.74 17239 66349
chr19 18263968 18288927 + PIK3R2 ENSG00000268173.1 18263968 0.93 0.8 17240 66309
chr19 18283972 18288927 + IFI30 ENSG00000216490.3 18283972 0.89 0.77 17241 46305
chr19 18303992 18307758 + MPV17L2 ENSG00000254858.5 18303992 0.66 0.99 17242 26285
chr19 18307594 18314884 - RAB3A ENSG00000105649.5 18314884 0.85 1.0 17243 15393
Expression level of Genes
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miRNAs possibly regulated by vista28892[chr19:18230044-18230277]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results