EnhancerDB
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  3. vista28897[chr19:18382556-18382948]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28897[chr19:18382556-18382948]
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Tissue distribution of vista28897
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Transcription factor that possibly regulate vista28897[chr19:18382556-18382948]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18382582 18382597 ZIC4 JASPAR yes 70820675
chr19 18382582 18382598 GLIS1 JASPAR yes 70820676
chr19 18382583 18382588 MYC TRANSFAC yes 70820677
chr19 18382583 18382597 GLIS2 JASPAR yes 70820678
chr19 18382583 18382597 GLIS3 JASPAR yes 70820679
chr19 18382583 18382597 ZIC1 JASPAR yes 70820680
chr19 18382606 18382622 POU4F2 JASPAR yes 70820681
chr19 18382606 18382622 POU4F3 JASPAR yes 70820682
chr19 18382608 18382622 POU4F1 JASPAR yes 70820683
chr19 18382609 18382619 BARHL2 JASPAR yes 70820684
chr19 18382611 18382615 YY1 TRANSFAC yes 70820685
chr19 18382611 18382626 FOXA1 JASPAR yes 70820686
chr19 18382612 18382624 FOXI1 JASPAR yes 70820687
chr19 18382612 18382626 POU4F1 JASPAR yes 70820688
chr19 18382612 18382627 FOXP1 JASPAR yes 70820689
chr19 18382612 18382627 HNF1A JASPAR yes 70820690
chr19 18382613 18382625 FOXC2 JASPAR yes 70820691
chr19 18382613 18382627 FOXF2 JASPAR yes 70820692
chr19 18382613 18382627 ONECUT3 JASPAR yes 70820693
chr19 18382613 18382627 POU4F1 JASPAR yes 70820694
chr19 18382613 18382629 POU4F3 JASPAR yes 70820695
chr19 18382614 18382625 FOXB1 JASPAR yes 70820696
chr19 18382614 18382625 FOXC1 JASPAR yes 70820697
chr19 18382614 18382625 PROP1 JASPAR yes 70820698
chr19 18382615 18382619 YY1 TRANSFAC yes 70820699
chr19 18382615 18382630 MEF2A JASPAR yes 70820700
chr19 18382616 18382631 MEF2C JASPAR yes 70820701
chr19 18382617 18382631 FOXF2 JASPAR yes 70820702
chr19 18382619 18382623 YY1 TRANSFAC yes 70820703
chr19 18382619 18382629 HOXC10 JASPAR yes 70820704
chr19 18382619 18382629 HOXD11 JASPAR yes 70820705
chr19 18382619 18382630 HOXC11 JASPAR yes 70820706
chr19 18382619 18382630 HOXD12 JASPAR yes 70820707
chr19 18382620 18382631 CDX2 JASPAR yes 70820708
chr19 18382642 18382657 AR JASPAR yes 70820709
chr19 18382649 18382653 NFE TRANSFAC yes 70820710
chr19 18382649 18382664 TFAP2C JASPAR yes 70820711
chr19 18382652 18382663 TFAP2A JASPAR yes 70820712
chr19 18382652 18382663 TFAP2B JASPAR yes 70820713
chr19 18382653 18382662 TFAP2A JASPAR yes 70820714
chr19 18382686 18382700 TLX1 JASPAR yes 70820715
chr19 18382686 18382704 ESR2 JASPAR yes 70820716
chr19 18382687 18382704 ESR1 JASPAR yes 70820717
chr19 18382690 18382711 ZNF263 JASPAR yes 70820718
chr19 18382697 18382709 HINFP JASPAR yes 70820719
chr19 18382701 18382709 SP1 TRANSFAC yes 70820720
chr19 18382701 18382711 SP1 JASPAR yes 70820721
chr19 18382770 18382785 RUNX2 JASPAR yes 70820722
chr19 18382782 18382797 MEF2C JASPAR yes 70820723
chr19 18382785 18382805 RREB1 JASPAR yes 70820724
chr19 18382787 18382802 FOXA1 JASPAR yes 70820725
chr19 18382788 18382794 TCF4 TRANSFAC yes 70820726
chr19 18382788 18382800 FOXI1 JASPAR yes 70820727
chr19 18382788 18382803 FOXP1 JASPAR yes 70820728
chr19 18382789 18382801 FOXC2 JASPAR yes 70820729
chr19 18382790 18382810 RREB1 JASPAR yes 70820730
chr19 18382791 18382802 FOXA1 JASPAR yes 70820731
chr19 18382791 18382812 IRF1 JASPAR yes 70820732
chr19 18382792 18382807 FOXP1 JASPAR yes 70820733
chr19 18382795 18382807 IRF1 JASPAR yes 70820734
chr19 18382795 18382815 RREB1 JASPAR yes 70820735
chr19 18382796 18382817 IRF1 JASPAR yes 70820736
chr19 18382797 18382803 TCF4 TRANSFAC yes 70820737
chr19 18382797 18382812 FOXP1 JASPAR yes 70820738
chr19 18382800 18382812 IRF1 JASPAR yes 70820739
chr19 18382802 18382808 TCF4 TRANSFAC yes 70820740
chr19 18382802 18382817 FOXP1 JASPAR yes 70820741
chr19 18382803 18382818 STAT2 JASPAR yes 70820742
chr19 18382805 18382817 IRF1 JASPAR yes 70820743
chr19 18382805 18382819 IRF7 JASPAR yes 70820744
chr19 18382807 18382813 TCF4 TRANSFAC yes 70820745
chr19 18382819 18382829 SP1 JASPAR yes 70820746
chr19 18382824 18382837 NFKB1 JASPAR yes 70820747
chr19 18382824 18382837 NFKB2 JASPAR yes 70820748
chr19 18382827 18382838 CEBPB JASPAR yes 70820749
chr19 18382830 18382842 YY1 JASPAR yes 70820750
chr19 18382867 18382877 SREBF2 JASPAR yes 70820751
chr19 18382870 18382883 NFKB1 JASPAR yes 70820752
chr19 18382916 18382927 FOSL2 JASPAR yes 70820753
SNP sites on vista28897[chr19:18382556-18382948]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28897[chr19:18382556-18382948]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18283972 18288927 + IFI30 ENSG00000216490.3 18283972 0.89 0.77 17241 1416
chr19 18303992 18307758 + MPV17L2 ENSG00000254858.5 18303992 0.66 0.99 17242 21436
chr19 18307594 18314884 - RAB3A ENSG00000105649.5 18314884 0.85 1.0 17243 32328
chr19 18318771 18366229 - PDE4C ENSG00000105650.17 18366229 0.94 1.0 17244 83673
chr19 18367908 18385319 - KIAA1683 ENSG00000130518.12 18385319 0.78 1.0 17245 97629
chr19 18390563 18392432 - JUND ENSG00000130522.4 18392432 0.82 1.0 17246 90516
chr19 18417040 18434084 - LSM4 ENSG00000130520.6 18434084 0.9 0.99 17247 48864
chr19 18451397 18480760 + PGPEP1 ENSG00000130517.9 18451397 0.69 1.0 17248 31551
Expression level of Genes
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miRNAs possibly regulated by vista28897[chr19:18382556-18382948]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results