EnhancerDB
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  3. vista28900[chr19:18401020-18401539]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28900[chr19:18401020-18401539]
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Tissue distribution of vista28900
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Transcription factor that possibly regulate vista28900[chr19:18401020-18401539]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18401067 18401616 RUNX3 UCSC Txn Factor no Conserved 108396792
chr19 18401184 18401532 EBF1 UCSC Txn Factor no Conserved 108396802
chr19 18401195 18401648 RELA UCSC Txn Factor no Conserved 108396804
chr19 18401329 18401555 EGR1 UCSC Txn Factor no Conserved 108396829
chr19 18401032 18401040 GATA5 JASPAR yes 70820791
chr19 18401032 18401040 GATA5 JASPAR yes 112725692
chr19 18401045 18401056 NFKB1 JASPAR yes 70820792
chr19 18401045 18401056 NFKB1 JASPAR yes 112725693
chr19 18401046 18401051 ETS2 TRANSFAC yes 70820793
chr19 18401046 18401051 ETS2 TRANSFAC yes 112725694
chr19 18401046 18401056 NFKB1 JASPAR yes 70820794
chr19 18401046 18401056 RELA JASPAR yes 70820795
chr19 18401046 18401056 NFKB1 JASPAR yes 112725695
chr19 18401046 18401056 RELA JASPAR yes 112725696
chr19 18401046 18401057 NFKB1 JASPAR yes 70820796
chr19 18401046 18401057 NFKB1 JASPAR yes 112725697
chr19 18401050 18401061 TFAP2A JASPAR yes 70820797
chr19 18401050 18401061 TFAP2B JASPAR yes 70820798
chr19 18401050 18401061 TFAP2C JASPAR yes 70820799
chr19 18401050 18401061 TFAP2A JASPAR yes 112725698
chr19 18401050 18401061 TFAP2B JASPAR yes 112725699
chr19 18401050 18401061 TFAP2C JASPAR yes 112725700
chr19 18401064 18401068 LFA1 TRANSFAC yes 70820800
chr19 18401064 18401068 LFA1 TRANSFAC yes 112725701
chr19 18401071 18401085 PLAG1 JASPAR yes 70820801
chr19 18401071 18401085 PLAG1 JASPAR yes 112725702
chr19 18401072 18401077 SP1 TRANSFAC yes 70820802
chr19 18401072 18401077 SP1 TRANSFAC yes 112725703
chr19 18401088 18401098 NFIA JASPAR yes 70820803
chr19 18401088 18401098 NFIA JASPAR yes 112725704
chr19 18401090 18401096 NFIC JASPAR yes 70820804
chr19 18401090 18401096 NFIC JASPAR yes 112725705
chr19 18401104 18401118 EBF1 JASPAR yes 70820805
chr19 18401104 18401118 EBF1 JASPAR yes 112725706
chr19 18401113 18401117 H4TF2 TRANSFAC yes 70820806
chr19 18401113 18401117 H4TF2 TRANSFAC yes 112725707
chr19 18401153 18401168 RFX5 JASPAR yes 70820807
chr19 18401153 18401168 RFX5 JASPAR yes 112725708
chr19 18401158 18401161 MYB TRANSFAC yes 70820808
chr19 18401158 18401161 MYB TRANSFAC yes 112725709
chr19 18401170 18401174 YY1 TRANSFAC yes 70820809
chr19 18401170 18401174 YY1 TRANSFAC yes 112725710
chr19 18401183 18401193 ZNF740 JASPAR yes 70820810
chr19 18401183 18401193 ZNF740 JASPAR yes 112725711
chr19 18401184 18401194 SP1 JASPAR yes 70820811
chr19 18401184 18401194 ZNF740 JASPAR yes 70820812
chr19 18401184 18401194 SP1 JASPAR yes 112725712
chr19 18401184 18401194 ZNF740 JASPAR yes 112725713
chr19 18401185 18401195 SP1 JASPAR yes 70820813
chr19 18401185 18401195 ZNF740 JASPAR yes 70820814
chr19 18401185 18401195 SP1 JASPAR yes 112725714
chr19 18401185 18401195 ZNF740 JASPAR yes 112725715
chr19 18401185 18401199 GLIS2 JASPAR yes 70820815
chr19 18401185 18401199 GLIS3 JASPAR yes 70820816
chr19 18401185 18401199 GLIS2 JASPAR yes 112725716
chr19 18401185 18401199 GLIS3 JASPAR yes 112725717
chr19 18401186 18401196 ZNF740 JASPAR yes 70820817
chr19 18401186 18401196 ZNF740 JASPAR yes 112725718
chr19 18401219 18401231 ZBTB7A JASPAR yes 70820818
chr19 18401219 18401231 ZBTB7A JASPAR yes 112725719
chr19 18401234 18401255 REST JASPAR yes 70820819
chr19 18401234 18401255 REST JASPAR yes 112725720
chr19 18401235 18401246 NFKB1 JASPAR yes 70820820
chr19 18401235 18401246 NFKB1 JASPAR yes 112725721
chr19 18401239 18401246 NFATC2 JASPAR yes 70820821
chr19 18401239 18401246 NFATC2 JASPAR yes 112725722
chr19 18401250 18401261 FOSL2 JASPAR yes 70820822
chr19 18401250 18401261 FOSL2 JASPAR yes 112725723
chr19 18401256 18401260 YY1 TRANSFAC yes 70820823
chr19 18401256 18401260 YY1 TRANSFAC yes 112725724
chr19 18401264 18401277 SMAD2 JASPAR yes 70820824
chr19 18401264 18401277 SMAD2 JASPAR yes 112725725
chr19 18401275 18401284 THAP1 JASPAR yes 70820825
chr19 18401275 18401284 THAP1 JASPAR yes 112725726
chr19 18401277 18401287 SP1 JASPAR yes 70820826
chr19 18401277 18401287 SP1 JASPAR yes 112725727
chr19 18401278 18401282 LFA1 TRANSFAC yes 70820827
chr19 18401278 18401282 LFA1 TRANSFAC yes 112725728
chr19 18401278 18401298 TP63 JASPAR yes 70820828
chr19 18401278 18401298 TP63 JASPAR yes 112725729
chr19 18401292 18401312 RREB1 JASPAR yes 70820829
chr19 18401292 18401312 RREB1 JASPAR yes 112725730
chr19 18401293 18401313 RREB1 JASPAR yes 70820830
chr19 18401293 18401313 RREB1 JASPAR yes 112725731
chr19 18401297 18401302 TFAP2A TRANSFAC yes 70820831
chr19 18401297 18401302 TFAP2A TRANSFAC yes 112725732
chr19 18401297 18401303 MZF1 JASPAR yes 70820832
chr19 18401297 18401303 MZF1 JASPAR yes 112725733
chr19 18401297 18401307 SP1 JASPAR yes 70820833
chr19 18401297 18401307 SP1 JASPAR yes 112725734
chr19 18401297 18401317 RREB1 JASPAR yes 70820834
chr19 18401297 18401317 RREB1 JASPAR yes 112725735
chr19 18401297 18401318 ZNF263 JASPAR yes 70820835
chr19 18401297 18401318 ZNF263 JASPAR yes 112725736
chr19 18401299 18401305 MAZ TRANSFAC yes 70820836
chr19 18401299 18401305 MAZ TRANSFAC yes 112725737
chr19 18401305 18401310 SP1 TRANSFAC yes 70820837
chr19 18401305 18401310 SP1 TRANSFAC yes 112725738
chr19 18401306 18401316 ZNF740 JASPAR yes 70820838
chr19 18401306 18401316 ZNF740 JASPAR yes 112725739
chr19 18401313 18401326 SMAD2 JASPAR yes 70820839
chr19 18401313 18401326 SMAD2 JASPAR yes 112725740
chr19 18401321 18401331 NHLH1 JASPAR yes 70820840
chr19 18401321 18401331 NHLH1 JASPAR yes 112725741
chr19 18401327 18401340 TFAP2A JASPAR yes 70820841
chr19 18401327 18401340 TFAP2B JASPAR yes 70820842
chr19 18401327 18401340 TFAP2C JASPAR yes 70820843
chr19 18401327 18401340 TFAP2A JASPAR yes 112725742
chr19 18401327 18401340 TFAP2B JASPAR yes 112725743
chr19 18401327 18401340 TFAP2C JASPAR yes 112725744
chr19 18401335 18401339 LFA1 TRANSFAC yes 70820844
chr19 18401335 18401339 LFA1 TRANSFAC yes 112725745
chr19 18401352 18401357 SP1 TRANSFAC yes 70820845
chr19 18401352 18401357 SP1 TRANSFAC yes 112725746
chr19 18401353 18401367 PLAG1 JASPAR yes 70820846
chr19 18401353 18401367 PLAG1 JASPAR yes 112725747
chr19 18401358 18401369 EBF1 JASPAR yes 70820847
chr19 18401358 18401369 EBF1 JASPAR yes 112725748
chr19 18401362 18401367 TFAP2A TRANSFAC yes 70820848
chr19 18401362 18401367 TFAP2A TRANSFAC yes 112725749
chr19 18401362 18401368 MZF1 JASPAR yes 70820849
chr19 18401362 18401368 MZF1 JASPAR yes 112725750
chr19 18401368 18401383 IRF9 JASPAR yes 70820850
chr19 18401368 18401383 IRF9 JASPAR yes 112725751
chr19 18401368 18401388 RREB1 JASPAR yes 70820851
chr19 18401368 18401388 RREB1 JASPAR yes 112725752
chr19 18401382 18401396 TLX1 JASPAR yes 70820852
chr19 18401382 18401396 TLX1 JASPAR yes 112725753
chr19 18401408 18401412 LFA1 TRANSFAC yes 70820853
chr19 18401408 18401412 LFA1 TRANSFAC yes 112725754
chr19 18401413 18401423 BARHL2 JASPAR yes 70820854
chr19 18401413 18401423 BARHL2 JASPAR yes 112725755
chr19 18401419 18401423 YY1 TRANSFAC yes 70820855
chr19 18401419 18401423 YY1 TRANSFAC yes 112725756
chr19 18401423 18401438 TFAP2A JASPAR yes 70820856
chr19 18401423 18401438 TFAP2A JASPAR yes 112725757
chr19 18401426 18401438 TFAP2A JASPAR yes 70820857
chr19 18401426 18401438 TFAP2B JASPAR yes 70820858
chr19 18401426 18401438 TFAP2C JASPAR yes 70820859
chr19 18401426 18401438 TFAP2A JASPAR yes 112725758
chr19 18401426 18401438 TFAP2B JASPAR yes 112725759
chr19 18401426 18401438 TFAP2C JASPAR yes 112725760
chr19 18401426 18401441 TFAP2A JASPAR yes 70820860
chr19 18401426 18401441 TFAP2A JASPAR yes 112725761
chr19 18401431 18401444 NFKB2 JASPAR yes 70820861
chr19 18401431 18401444 NFKB2 JASPAR yes 112725762
chr19 18401432 18401442 NFKB1 JASPAR yes 70820862
chr19 18401432 18401442 NFKB1 JASPAR yes 112725763
chr19 18401432 18401443 NFKB1 JASPAR yes 70820863
chr19 18401432 18401443 NFKB1 JASPAR yes 112725764
chr19 18401436 18401440 NFE TRANSFAC yes 70820864
chr19 18401436 18401440 NFE TRANSFAC yes 112725765
chr19 18401439 18401445 MZF1 JASPAR yes 70820865
chr19 18401439 18401445 MZF1 JASPAR yes 112725766
chr19 18401440 18401450 SP1 JASPAR yes 70820866
chr19 18401440 18401450 SP1 JASPAR yes 112725767
chr19 18401443 18401459 ZNF143 JASPAR yes 70820867
chr19 18401443 18401459 ZNF143 JASPAR yes 112725768
chr19 18401450 18401454 H4TF2 TRANSFAC yes 70820868
chr19 18401450 18401454 H4TF2 TRANSFAC yes 112725769
chr19 18401465 18401470 ATF1 TRANSFAC yes 70820869
chr19 18401465 18401470 ATF1 TRANSFAC yes 112725770
chr19 18401465 18401473 CREB1 JASPAR yes 70820870
chr19 18401465 18401473 CREB1 JASPAR yes 112725771
chr19 18401465 18401477 PKNOX1 JASPAR yes 70820871
chr19 18401465 18401477 PKNOX2 JASPAR yes 70820872
chr19 18401465 18401477 TGIF1 JASPAR yes 70820873
chr19 18401465 18401477 TGIF2 JASPAR yes 70820874
chr19 18401465 18401477 PKNOX1 JASPAR yes 112725772
chr19 18401465 18401477 PKNOX2 JASPAR yes 112725773
chr19 18401465 18401477 TGIF1 JASPAR yes 112725774
chr19 18401465 18401477 TGIF2 JASPAR yes 112725775
chr19 18401471 18401475 NFE TRANSFAC yes 70820875
chr19 18401471 18401475 NFE TRANSFAC yes 112725776
chr19 18401492 18401506 PLAG1 JASPAR yes 70820876
chr19 18401492 18401506 PLAG1 JASPAR yes 112725777
chr19 18401505 18401510 SP1 TRANSFAC yes 70820877
chr19 18401505 18401510 SP1 TRANSFAC yes 112725778
chr19 18401517 18401532 RUNX2 JASPAR yes 70820878
chr19 18401517 18401532 RUNX2 JASPAR yes 112725779
chr19 18401518 18401522 NFE TRANSFAC yes 70820879
chr19 18401518 18401522 NFE TRANSFAC yes 112725780
chr19 18401532 18401538 JUN TRANSFAC yes 70820880
chr19 18401532 18401538 JUN TRANSFAC yes 112725781
SNP sites on vista28900[chr19:18401020-18401539]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28900[chr19:18401020-18401539]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18303992 18307758 + MPV17L2 ENSG00000254858.5 18303992 0.66 0.99 17242 2972
chr19 18307594 18314884 - RAB3A ENSG00000105649.5 18314884 0.85 1.0 17243 13864
chr19 18318771 18366229 - PDE4C ENSG00000105650.17 18366229 0.94 1.0 17244 65209
chr19 18367908 18385319 - KIAA1683 ENSG00000130518.12 18385319 0.78 1.0 17245 84299
chr19 18390563 18392432 - JUND ENSG00000130522.4 18392432 0.82 1.0 17246 91412
chr19 18417040 18434084 - LSM4 ENSG00000130520.6 18434084 0.9 0.99 17247 67455
chr19 18451397 18480760 + PGPEP1 ENSG00000130517.9 18451397 0.69 1.0 17248 50142
chr19 18485541 18499986 + GDF15 ENSG00000130513.6 18485541 0.94 1.0 17249 15998
Expression level of Genes
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miRNAs possibly regulated by vista28900[chr19:18401020-18401539]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results