EnhancerDB
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  3. vista28902[chr19:18404099-18404539]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28902[chr19:18404099-18404539]
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Tissue distribution of vista28902
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Transcription factor that possibly regulate vista28902[chr19:18404099-18404539]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18402109 18404613 POLR2A UCSC Txn Factor no Conserved 108396915
chr19 18402109 18404613 POLR2A UCSC Txn Factor no Conserved 108396916
chr19 18404119 18404352 TFAP2C UCSC Txn Factor no Conserved 108397109
chr19 18404096 18404106 NFATC3 JASPAR yes 70821095
chr19 18404096 18404106 NFATC3 JASPAR yes 112726244
chr19 18404098 18404105 NFATC2 JASPAR yes 70821096
chr19 18404098 18404105 NFATC2 JASPAR yes 112726245
chr19 18404111 18404124 SMAD2 JASPAR yes 70821097
chr19 18404111 18404124 SMAD2 JASPAR yes 112726246
chr19 18404139 18404148 ZEB1 JASPAR yes 70821098
chr19 18404139 18404148 ZEB1 JASPAR yes 112726247
chr19 18404164 18404179 TFAP2A JASPAR yes 70821099
chr19 18404164 18404179 TFAP2A JASPAR yes 112726248
chr19 18404166 18404181 TFAP2C JASPAR yes 70821100
chr19 18404166 18404181 TFAP2C JASPAR yes 112726249
chr19 18404167 18404179 TFAP2A JASPAR yes 70821101
chr19 18404167 18404179 TFAP2B JASPAR yes 70821102
chr19 18404167 18404179 TFAP2C JASPAR yes 70821103
chr19 18404167 18404179 TFAP2A JASPAR yes 112726250
chr19 18404167 18404179 TFAP2B JASPAR yes 112726251
chr19 18404167 18404179 TFAP2C JASPAR yes 112726252
chr19 18404189 18404208 CTCF JASPAR yes 70821104
chr19 18404189 18404208 CTCF JASPAR yes 112726253
chr19 18404200 18404205 SP1 TRANSFAC yes 70821105
chr19 18404200 18404205 SP1 TRANSFAC yes 112726254
chr19 18404212 18404218 PEA3 TRANSFAC yes 70821106
chr19 18404212 18404218 PEA3 TRANSFAC yes 112726255
chr19 18404231 18404234 MYB TRANSFAC yes 70821107
chr19 18404231 18404234 MYB TRANSFAC yes 112726256
chr19 18404233 18404254 REST JASPAR yes 70821108
chr19 18404233 18404254 REST JASPAR yes 112726257
chr19 18404234 18404253 REST JASPAR yes 70821109
chr19 18404234 18404253 REST JASPAR yes 112726258
chr19 18404249 18404264 TFAP2C JASPAR yes 70821110
chr19 18404249 18404264 TFAP2C JASPAR yes 112726259
chr19 18404273 18404291 MAFF JASPAR yes 70821111
chr19 18404273 18404291 MAFF JASPAR yes 112726260
chr19 18404275 18404286 NRL JASPAR yes 70821112
chr19 18404275 18404286 NRL JASPAR yes 112726261
chr19 18404275 18404290 MAFK JASPAR yes 70821113
chr19 18404275 18404290 MAFK JASPAR yes 112726262
chr19 18404294 18404309 RUNX2 JASPAR yes 70821114
chr19 18404294 18404309 RUNX2 JASPAR yes 112726263
chr19 18404310 18404315 ETS2 TRANSFAC yes 70821115
chr19 18404310 18404315 ETS2 TRANSFAC yes 112726264
chr19 18404310 18404318 EHF JASPAR yes 70821116
chr19 18404310 18404318 EHF JASPAR yes 112726265
chr19 18404312 18404323 ESRRB JASPAR yes 70821117
chr19 18404312 18404323 ESRRB JASPAR yes 112726266
chr19 18404316 18404320 ESR1 TRANSFAC yes 70821118
chr19 18404316 18404320 ESR1 TRANSFAC yes 112726267
chr19 18404335 18404341 YY1 JASPAR yes 70821119
chr19 18404335 18404341 YY1 JASPAR yes 112726268
chr19 18404341 18404345 ESR1 TRANSFAC yes 70821120
chr19 18404341 18404345 ESR1 TRANSFAC yes 112726269
chr19 18404354 18404360 SP1 TRANSFAC yes 70821121
chr19 18404354 18404360 SP1 TRANSFAC yes 112726270
chr19 18404356 18404361 SP1 TRANSFAC yes 70821122
chr19 18404356 18404361 SP1 TRANSFAC yes 112726271
chr19 18404361 18404365 NFE TRANSFAC yes 70821123
chr19 18404361 18404365 NFE TRANSFAC yes 112726272
chr19 18404368 18404376 FOXO3 JASPAR yes 70821124
chr19 18404368 18404376 FOXO3 JASPAR yes 112726273
chr19 18404371 18404385 TCF7L2 JASPAR yes 70821125
chr19 18404371 18404385 TCF7L2 JASPAR yes 112726274
chr19 18404371 18404386 LEF1 JASPAR yes 70821126
chr19 18404371 18404386 LEF1 JASPAR yes 112726275
chr19 18404384 18404403 PAX5 JASPAR yes 70821127
chr19 18404384 18404403 PAX5 JASPAR yes 112726276
chr19 18404417 18404427 SREBF1 JASPAR yes 70821128
chr19 18404417 18404427 SREBF2 JASPAR yes 70821129
chr19 18404417 18404427 SREBF1 JASPAR yes 112726277
chr19 18404417 18404427 SREBF2 JASPAR yes 112726278
chr19 18404417 18404431 JUN JASPAR yes 70821130
chr19 18404417 18404431 JUN JASPAR yes 112726279
chr19 18404420 18404431 FOSL2 JASPAR yes 70821131
chr19 18404420 18404431 JUNB JASPAR yes 70821132
chr19 18404420 18404431 FOSL2 JASPAR yes 112726280
chr19 18404420 18404431 JUNB JASPAR yes 112726281
chr19 18404421 18404432 FOS JASPAR yes 70821133
chr19 18404421 18404432 FOSL1 JASPAR yes 70821134
chr19 18404421 18404432 JUND JASPAR yes 70821135
chr19 18404421 18404432 FOS JASPAR yes 112726282
chr19 18404421 18404432 FOSL1 JASPAR yes 112726283
chr19 18404421 18404432 JUND JASPAR yes 112726284
chr19 18404422 18404429 JUN TRANSFAC yes 70821136
chr19 18404422 18404429 JUN TRANSFAC yes 112726285
chr19 18404476 18404480 TEAD2 TRANSFAC yes 70821137
chr19 18404476 18404480 TEAD2 TRANSFAC yes 112726286
chr19 18404476 18404481 TBP TRANSFAC yes 70821138
chr19 18404476 18404481 TBP TRANSFAC yes 112726287
chr19 18404481 18404492 USF1 JASPAR yes 70821139
chr19 18404481 18404492 USF1 JASPAR yes 112726288
chr19 18404482 18404492 SREBF2 JASPAR yes 70821140
chr19 18404482 18404492 SREBF2 JASPAR yes 112726289
chr19 18404490 18404501 NFE2L2 JASPAR yes 70821141
chr19 18404490 18404501 NFE2L2 JASPAR yes 112726290
chr19 18404502 18404510 MEIS2 JASPAR yes 70821142
chr19 18404502 18404510 MEIS3 JASPAR yes 70821143
chr19 18404502 18404510 MEIS2 JASPAR yes 112726291
chr19 18404502 18404510 MEIS3 JASPAR yes 112726292
chr19 18404510 18404515 SP1 TRANSFAC yes 70821144
chr19 18404510 18404515 SP1 TRANSFAC yes 112726293
chr19 18404512 18404532 RREB1 JASPAR yes 70821145
chr19 18404512 18404532 RREB1 JASPAR yes 112726294
chr19 18404514 18404534 RREB1 JASPAR yes 70821146
chr19 18404514 18404534 RREB1 JASPAR yes 112726295
chr19 18404515 18404536 ZNF263 JASPAR yes 70821147
chr19 18404515 18404536 ZNF263 JASPAR yes 112726296
chr19 18404516 18404536 RREB1 JASPAR yes 70821148
chr19 18404516 18404536 RREB1 JASPAR yes 112726297
chr19 18404517 18404537 RREB1 JASPAR yes 70821149
chr19 18404517 18404537 RREB1 JASPAR yes 112726298
chr19 18404519 18404539 RREB1 JASPAR yes 70821150
chr19 18404519 18404539 RREB1 JASPAR yes 112726299
chr19 18404527 18404532 SP1 TRANSFAC yes 70821151
chr19 18404527 18404532 SP1 TRANSFAC yes 112726300
chr19 18404527 18404537 ZNF740 JASPAR yes 70821152
chr19 18404527 18404537 ZNF740 JASPAR yes 112726301
chr19 18404528 18404538 SP1 JASPAR yes 70821153
chr19 18404528 18404538 ZNF740 JASPAR yes 70821154
chr19 18404528 18404538 SP1 JASPAR yes 112726302
chr19 18404528 18404538 ZNF740 JASPAR yes 112726303
chr19 18404529 18404539 ZNF740 JASPAR yes 70821155
chr19 18404529 18404539 ZNF740 JASPAR yes 112726304
chr19 18404534 18404539 SP1 TRANSFAC yes 70821156
chr19 18404534 18404539 SP1 TRANSFAC yes 112726305
SNP sites on vista28902[chr19:18404099-18404539]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28902[chr19:18404099-18404539]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18307594 18314884 - RAB3A ENSG00000105649.5 18314884 0.85 1.0 17243 10785
chr19 18318771 18366229 - PDE4C ENSG00000105650.17 18366229 0.94 1.0 17244 62130
chr19 18367908 18385319 - KIAA1683 ENSG00000130518.12 18385319 0.78 1.0 17245 81220
chr19 18390563 18392432 - JUND ENSG00000130522.4 18392432 0.82 1.0 17246 88333
chr19 18417040 18434084 - LSM4 ENSG00000130520.6 18434084 0.9 0.99 17247 70455
chr19 18451397 18480760 + PGPEP1 ENSG00000130517.9 18451397 0.69 1.0 17248 53142
chr19 18485541 18499986 + GDF15 ENSG00000130513.6 18485541 0.94 1.0 17249 18998
Expression level of Genes
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miRNAs possibly regulated by vista28902[chr19:18404099-18404539]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results