EnhancerDB
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  3. vista28915[chr19:18527231-18527472]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28915[chr19:18527231-18527472]
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Tissue distribution of vista28915
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Transcription factor that possibly regulate vista28915[chr19:18527231-18527472]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18527084 18528172 MAX UCSC Txn Factor no Conserved 108398282
chr19 18527084 18528172 MAX UCSC Txn Factor no Conserved 108398283
chr19 18527114 18527458 E2F6 UCSC Txn Factor no Conserved 108398286
chr19 18527123 18527439 MYC UCSC Txn Factor no Conserved 108398287
chr19 18527231 18527235 NFE TRANSFAC yes 70822065
chr19 18527236 18527255 REST JASPAR yes 70822066
chr19 18527274 18527284 MAX JASPAR yes 70822067
chr19 18527275 18527285 MAX JASPAR yes 70822068
chr19 18527275 18527285 MNT JASPAR yes 70822069
chr19 18527276 18527283 USF1 JASPAR yes 70822070
chr19 18527277 18527282 MYC TRANSFAC yes 70822071
chr19 18527277 18527282 USF1 TRANSFAC yes 70822072
chr19 18527277 18527282 USF2 TRANSFAC yes 70822073
chr19 18527284 18527298 GLIS3 JASPAR yes 70822074
chr19 18527284 18527298 ZIC1 JASPAR yes 70822075
chr19 18527284 18527299 ZIC3 JASPAR yes 70822076
chr19 18527284 18527299 ZIC4 JASPAR yes 70822077
chr19 18527287 18527303 ZNF143 JASPAR yes 70822078
chr19 18527311 18527316 ATF1 TRANSFAC yes 70822079
chr19 18527322 18527343 ZNF263 JASPAR yes 70822080
chr19 18527325 18527346 ZNF263 JASPAR yes 70822081
chr19 18527340 18527361 ZNF263 JASPAR yes 70822082
chr19 18527343 18527364 ZNF263 JASPAR yes 70822083
chr19 18527344 18527359 SOX21 JASPAR yes 70822084
chr19 18527344 18527360 SOX4 JASPAR yes 70822085
chr19 18527384 18527399 NR2C2 JASPAR yes 70822086
chr19 18527386 18527396 SP1 JASPAR yes 70822087
chr19 18527387 18527393 SP1 TRANSFAC yes 70822088
chr19 18527387 18527397 SP1 JASPAR yes 70822089
chr19 18527387 18527397 SP1 TRANSFAC yes 70822090
chr19 18527391 18527404 TFAP2A JASPAR yes 70822091
chr19 18527391 18527404 TFAP2B JASPAR yes 70822092
chr19 18527391 18527404 TFAP2C JASPAR yes 70822093
chr19 18527398 18527408 SP1 JASPAR yes 70822094
chr19 18527419 18527440 ZNF263 JASPAR yes 70822095
chr19 18527425 18527434 THAP1 JASPAR yes 70822096
chr19 18527427 18527433 YY1 JASPAR yes 70822097
chr19 18527428 18527449 ZNF263 JASPAR yes 70822098
chr19 18527431 18527452 ZNF263 JASPAR yes 70822099
chr19 18527435 18527452 RXRA JASPAR yes 70822100
chr19 18527437 18527458 ZNF263 JASPAR yes 70822101
chr19 18527448 18527458 SP1 JASPAR yes 70822102
chr19 18527451 18527457 NFE2 TRANSFAC yes 70822103
SNP sites on vista28915[chr19:18527231-18527472]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28915[chr19:18527231-18527472]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18417040 18434084 - LSM4 ENSG00000130520.6 18434084 0.9 0.99 17247 6853
chr19 18451397 18480760 + PGPEP1 ENSG00000130517.9 18451397 0.69 1.0 17248 24166
chr19 18485541 18499986 + GDF15 ENSG00000130513.6 18485541 0.94 1.0 17249 58310
chr19 18501954 18508427 - LRRC25 ENSG00000175489.9 18508427 0.98 0.88 17250 81196
chr19 18529674 18545372 + SSBP4 ENSG00000130511.11 18529674 0.64 1.0 17251 97798
chr19 18545198 18549111 - ISYNA1 ENSG00000105655.14 18549111 0.83 1.0 17252 78361
Expression level of Genes
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miRNAs possibly regulated by vista28915[chr19:18527231-18527472]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results