EnhancerDB
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  3. vista28919[chr19:18533547-18533601]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28919[chr19:18533547-18533601]
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Tissue distribution of vista28919
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Transcription factor that possibly regulate vista28919[chr19:18533547-18533601]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18533545 18533553 EHF JASPAR yes 70822370
chr19 18533545 18533553 FEV JASPAR yes 70822371
chr19 18533545 18533553 EHF JASPAR yes 112733961
chr19 18533545 18533553 FEV JASPAR yes 112733962
chr19 18533546 18533553 SPI1 JASPAR yes 70822372
chr19 18533546 18533553 SPI1 JASPAR yes 112733963
chr19 18533551 18533556 GATA1 TRANSFAC yes 70822373
chr19 18533551 18533556 GATA1 TRANSFAC yes 112733964
chr19 18533553 18533568 TFAP2A JASPAR yes 70822374
chr19 18533553 18533568 TFAP2C JASPAR yes 70822375
chr19 18533553 18533568 TFAP2A JASPAR yes 112733965
chr19 18533553 18533568 TFAP2C JASPAR yes 112733966
chr19 18533556 18533567 TFAP2A JASPAR yes 70822376
chr19 18533556 18533567 TFAP2B JASPAR yes 70822377
chr19 18533556 18533567 TFAP2C JASPAR yes 70822378
chr19 18533556 18533567 TFAP2A JASPAR yes 112733967
chr19 18533556 18533567 TFAP2B JASPAR yes 112733968
chr19 18533556 18533567 TFAP2C JASPAR yes 112733969
chr19 18533557 18533566 TFAP2A JASPAR yes 70822379
chr19 18533557 18533566 TFAP2A JASPAR yes 112733970
chr19 18533562 18533566 LFA1 TRANSFAC yes 70822380
chr19 18533562 18533566 LFA1 TRANSFAC yes 112733971
chr19 18533562 18533582 TP63 JASPAR yes 70822381
chr19 18533562 18533582 TP63 JASPAR yes 112733972
chr19 18533569 18533580 ELK4 JASPAR yes 70822382
chr19 18533569 18533580 FLI1 JASPAR yes 70822383
chr19 18533569 18533580 ELK4 JASPAR yes 112733973
chr19 18533569 18533580 FLI1 JASPAR yes 112733974
chr19 18533570 18533580 ERF JASPAR yes 70822384
chr19 18533570 18533580 ETS1 JASPAR yes 70822385
chr19 18533570 18533580 ETV6 JASPAR yes 70822386
chr19 18533570 18533580 GABPA JASPAR yes 70822387
chr19 18533570 18533580 ERF JASPAR yes 112733975
chr19 18533570 18533580 ETS1 JASPAR yes 112733976
chr19 18533570 18533580 ETV6 JASPAR yes 112733977
chr19 18533570 18533580 GABPA JASPAR yes 112733978
chr19 18533570 18533583 ELF1 JASPAR yes 70822388
chr19 18533570 18533583 ELF1 JASPAR yes 112733979
chr19 18533571 18533578 SPI1 JASPAR yes 70822389
chr19 18533571 18533578 SPI1 JASPAR yes 112733980
chr19 18533571 18533579 EHF JASPAR yes 70822390
chr19 18533571 18533579 FEV JASPAR yes 70822391
chr19 18533571 18533579 EHF JASPAR yes 112733981
chr19 18533571 18533579 FEV JASPAR yes 112733982
chr19 18533574 18533589 TFAP2A JASPAR yes 70822392
chr19 18533574 18533589 TFAP2C JASPAR yes 70822393
chr19 18533574 18533589 TFAP2A JASPAR yes 112733983
chr19 18533574 18533589 TFAP2C JASPAR yes 112733984
chr19 18533582 18533602 PPARG JASPAR yes 70822394
chr19 18533582 18533602 PPARG JASPAR yes 112733985
chr19 18533589 18533604 STAT2 JASPAR yes 70822395
chr19 18533589 18533604 STAT2 JASPAR yes 112733986
chr19 18533590 18533604 STAT1 JASPAR yes 70822396
chr19 18533590 18533604 STAT1 JASPAR yes 112733987
chr19 18533594 18533599 ETS2 TRANSFAC yes 70822397
chr19 18533594 18533599 ETS2 TRANSFAC yes 112733988
SNP sites on vista28919[chr19:18533547-18533601]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28919[chr19:18533547-18533601]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18417040 18434084 - LSM4 ENSG00000130520.6 18434084 0.9 0.99 17247 537
chr19 18451397 18480760 + PGPEP1 ENSG00000130517.9 18451397 0.69 1.0 17248 17850
chr19 18485541 18499986 + GDF15 ENSG00000130513.6 18485541 0.94 1.0 17249 51994
chr19 18501954 18508427 - LRRC25 ENSG00000175489.9 18508427 0.98 0.88 17250 74880
chr19 18529674 18545372 + SSBP4 ENSG00000130511.11 18529674 0.64 1.0 17251 96127
chr19 18545198 18549111 - ISYNA1 ENSG00000105655.14 18549111 0.83 1.0 17252 84490
chr19 18553473 18632937 - ELL ENSG00000105656.8 18632937 0.66 1.0 17253 664
Expression level of Genes
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miRNAs possibly regulated by vista28919[chr19:18533547-18533601]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results