EnhancerDB
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  3. vista28920[chr19:18579448-18579643]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28920[chr19:18579448-18579643]
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Tissue distribution of vista28920
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Transcription factor that possibly regulate vista28920[chr19:18579448-18579643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18579443 18579454 E2F4 JASPAR yes 70822398
chr19 18579443 18579454 E2F6 JASPAR yes 70822399
chr19 18579443 18579454 E2F4 JASPAR yes 112738702
chr19 18579443 18579454 E2F6 JASPAR yes 112738703
chr19 18579444 18579455 E2F1 JASPAR yes 70822400
chr19 18579444 18579455 E2F1 JASPAR yes 112738704
chr19 18579448 18579453 SP1 TRANSFAC yes 70822401
chr19 18579448 18579453 SP1 TRANSFAC yes 112738705
chr19 18579458 18579462 NFE TRANSFAC yes 70822402
chr19 18579458 18579462 NFE TRANSFAC yes 112738706
chr19 18579459 18579476 RXRA JASPAR yes 70822403
chr19 18579459 18579476 RXRA JASPAR yes 112738707
chr19 18579470 18579473 MYB TRANSFAC yes 70822404
chr19 18579470 18579473 MYB TRANSFAC yes 112738708
chr19 18579470 18579484 ZIC1 JASPAR yes 70822405
chr19 18579470 18579484 ZIC1 JASPAR yes 112738709
chr19 18579470 18579485 ZIC4 JASPAR yes 70822406
chr19 18579470 18579485 ZIC4 JASPAR yes 112738710
chr19 18579477 18579496 CTCF JASPAR yes 70822407
chr19 18579477 18579496 CTCF JASPAR yes 112738711
chr19 18579479 18579485 NFE2 TRANSFAC yes 70822408
chr19 18579479 18579485 NFE2 TRANSFAC yes 112738712
chr19 18579480 18579494 ZIC1 JASPAR yes 70822409
chr19 18579480 18579494 ZIC1 JASPAR yes 112738713
chr19 18579480 18579495 ZIC3 JASPAR yes 70822410
chr19 18579480 18579495 ZIC4 JASPAR yes 70822411
chr19 18579480 18579495 ZIC3 JASPAR yes 112738714
chr19 18579480 18579495 ZIC4 JASPAR yes 112738715
chr19 18579490 18579494 H4TF2 TRANSFAC yes 70822412
chr19 18579490 18579494 H4TF2 TRANSFAC yes 112738716
chr19 18579491 18579510 REST JASPAR yes 70822413
chr19 18579491 18579510 REST JASPAR yes 112738717
chr19 18579493 18579508 TFAP2A JASPAR yes 70822414
chr19 18579493 18579508 TFAP2C JASPAR yes 70822415
chr19 18579493 18579508 TFAP2A JASPAR yes 112738718
chr19 18579493 18579508 TFAP2C JASPAR yes 112738719
chr19 18579495 18579510 TFAP2A JASPAR yes 70822416
chr19 18579495 18579510 TFAP2C JASPAR yes 70822417
chr19 18579495 18579510 TFAP2A JASPAR yes 112738720
chr19 18579495 18579510 TFAP2C JASPAR yes 112738721
chr19 18579496 18579507 TFAP2A JASPAR yes 70822418
chr19 18579496 18579507 TFAP2B JASPAR yes 70822419
chr19 18579496 18579507 TFAP2C JASPAR yes 70822420
chr19 18579496 18579507 TFAP2A JASPAR yes 112738722
chr19 18579496 18579507 TFAP2B JASPAR yes 112738723
chr19 18579496 18579507 TFAP2C JASPAR yes 112738724
chr19 18579524 18579530 NFE2 TRANSFAC yes 70822421
chr19 18579524 18579530 NFE2 TRANSFAC yes 112738725
chr19 18579532 18579543 FOSL2 JASPAR yes 70822422
chr19 18579532 18579543 JUNB JASPAR yes 70822423
chr19 18579532 18579543 FOSL2 JASPAR yes 112738726
chr19 18579532 18579543 JUNB JASPAR yes 112738727
chr19 18579533 18579544 FOSL1 JASPAR yes 70822424
chr19 18579533 18579544 FOSL1 JASPAR yes 112738728
chr19 18579534 18579541 JUN TRANSFAC yes 70822425
chr19 18579534 18579541 JUN TRANSFAC yes 112738729
chr19 18579544 18579553 HIC2 JASPAR yes 70822426
chr19 18579544 18579553 HIC2 JASPAR yes 112738730
chr19 18579547 18579551 LFA1 TRANSFAC yes 70822427
chr19 18579547 18579551 LFA1 TRANSFAC yes 112738731
chr19 18579554 18579564 BHLHE40 JASPAR yes 70822428
chr19 18579554 18579564 BHLHE40 JASPAR yes 112738732
chr19 18579556 18579561 MYC TRANSFAC yes 70822429
chr19 18579556 18579561 USF1 TRANSFAC yes 70822430
chr19 18579556 18579561 USF2 TRANSFAC yes 70822431
chr19 18579556 18579561 MYC TRANSFAC yes 112738733
chr19 18579556 18579561 USF1 TRANSFAC yes 112738734
chr19 18579556 18579561 USF2 TRANSFAC yes 112738735
chr19 18579567 18579571 NFE TRANSFAC yes 70822432
chr19 18579567 18579571 NFE TRANSFAC yes 112738736
chr19 18579574 18579585 NFKB1 JASPAR yes 70822433
chr19 18579574 18579585 NFKB1 JASPAR yes 112738737
chr19 18579575 18579585 NFKB1 JASPAR yes 70822434
chr19 18579575 18579585 RELA JASPAR yes 70822435
chr19 18579575 18579585 REL JASPAR yes 70822436
chr19 18579575 18579585 NFKB1 JASPAR yes 112738738
chr19 18579575 18579585 RELA JASPAR yes 112738739
chr19 18579575 18579585 REL JASPAR yes 112738740
chr19 18579598 18579604 NFIC JASPAR yes 70822437
chr19 18579598 18579604 NFIC JASPAR yes 112738741
chr19 18579602 18579613 NFE2 JASPAR yes 70822438
chr19 18579602 18579613 NFE2 JASPAR yes 112738742
chr19 18579613 18579617 NFE TRANSFAC yes 70822439
chr19 18579613 18579617 NFE TRANSFAC yes 112738743
chr19 18579620 18579635 TFAP2A JASPAR yes 70822440
chr19 18579620 18579635 TFAP2C JASPAR yes 70822441
chr19 18579620 18579635 TFAP2A JASPAR yes 112738744
chr19 18579620 18579635 TFAP2C JASPAR yes 112738745
SNP sites on vista28920[chr19:18579448-18579643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28920[chr19:18579448-18579643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18485541 18499986 + GDF15 ENSG00000130513.6 18485541 0.94 1.0 17249 6093
chr19 18501954 18508427 - LRRC25 ENSG00000175489.9 18508427 0.98 0.88 17250 28979
chr19 18529674 18545372 + SSBP4 ENSG00000130511.11 18529674 0.64 1.0 17251 50226
chr19 18545198 18549111 - ISYNA1 ENSG00000105655.14 18549111 0.83 1.0 17252 69663
chr19 18553473 18632937 - ELL ENSG00000105656.8 18632937 0.66 1.0 17253 46706
chr19 18642561 18654887 - FKBP8 ENSG00000105701.11 18654887 0.6 1.0 17254 24756
chr19 18668572 18680197 + KXD1 ENSG00000105700.6 18668572 0.7 1.0 17255 11071
Expression level of Genes
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miRNAs possibly regulated by vista28920[chr19:18579448-18579643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results