EnhancerDB
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  3. vista28926[chr19:18600936-18601077]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28926[chr19:18600936-18601077]
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Tissue distribution of vista28926
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Transcription factor that possibly regulate vista28926[chr19:18600936-18601077]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18600931 18600940 SRY JASPAR yes 70822816
chr19 18600931 18600940 SRY JASPAR yes 112741010
chr19 18600943 18600954 NFIL3 JASPAR yes 70822817
chr19 18600943 18600954 NFIL3 JASPAR yes 112741011
chr19 18600966 18600981 HNF4A JASPAR yes 70822818
chr19 18600966 18600981 HNF4A JASPAR yes 112741012
chr19 18600970 18600976 SOX10 JASPAR yes 70822819
chr19 18600970 18600976 SOX10 JASPAR yes 112741013
chr19 18600977 18600989 YY1 JASPAR yes 70822820
chr19 18600977 18600989 YY1 JASPAR yes 112741014
chr19 18600990 18600998 ATF2 TRANSFAC yes 70822821
chr19 18600990 18600998 ATF2 TRANSFAC yes 112741015
chr19 18600991 18600996 ATF1 TRANSFAC yes 70822822
chr19 18600991 18600996 ATF1 TRANSFAC yes 112741016
chr19 18600991 18601008 RXRA JASPAR yes 70822823
chr19 18600991 18601008 RXRA JASPAR yes 112741017
chr19 18601000 18601012 PKNOX2 JASPAR yes 70822824
chr19 18601000 18601012 PKNOX2 JASPAR yes 112741018
chr19 18601002 18601011 SNAI2 JASPAR yes 70822825
chr19 18601002 18601011 SNAI2 JASPAR yes 112741019
chr19 18601003 18601008 USF2 TRANSFAC yes 70822826
chr19 18601003 18601008 USF2 TRANSFAC yes 112741020
chr19 18601006 18601012 NFE2 TRANSFAC yes 70822827
chr19 18601006 18601012 NFE2 TRANSFAC yes 112741021
chr19 18601007 18601022 NR2C2 JASPAR yes 70822828
chr19 18601007 18601022 NR2C2 JASPAR yes 112741022
chr19 18601009 18601015 SP1 TRANSFAC yes 70822829
chr19 18601009 18601015 SP1 TRANSFAC yes 112741023
chr19 18601009 18601019 SP1 JASPAR yes 70822830
chr19 18601009 18601019 SP1 JASPAR yes 112741024
chr19 18601009 18601029 RREB1 JASPAR yes 70822831
chr19 18601009 18601029 RREB1 JASPAR yes 112741025
chr19 18601010 18601020 SP1 JASPAR yes 70822832
chr19 18601010 18601020 SP1 JASPAR yes 112741026
chr19 18601013 18601023 ZNF740 JASPAR yes 70822833
chr19 18601013 18601023 ZNF740 JASPAR yes 112741027
chr19 18601014 18601024 ZNF740 JASPAR yes 70822834
chr19 18601014 18601024 ZNF740 JASPAR yes 112741028
chr19 18601017 18601027 SP1 JASPAR yes 70822835
chr19 18601017 18601027 SP1 JASPAR yes 112741029
chr19 18601033 18601038 GATA2 JASPAR yes 70822836
chr19 18601033 18601038 GATA2 JASPAR yes 112741030
chr19 18601034 18601040 ZNF354C JASPAR yes 70822837
chr19 18601034 18601040 ZNF354C JASPAR yes 112741031
chr19 18601040 18601047 NKX3-1 JASPAR yes 70822838
chr19 18601040 18601047 NKX3-1 JASPAR yes 112741032
chr19 18601047 18601058 DMRT3 JASPAR yes 70822839
chr19 18601047 18601058 DMRT3 JASPAR yes 112741033
chr19 18601074 18601086 SRF JASPAR yes 70822840
chr19 18601074 18601086 SRF JASPAR yes 112741034
chr19 18601075 18601079 YY1 TRANSFAC yes 70822841
chr19 18601075 18601079 YY1 TRANSFAC yes 112741035
SNP sites on vista28926[chr19:18600936-18601077]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28926[chr19:18600936-18601077]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18501954 18508427 - LRRC25 ENSG00000175489.9 18508427 0.98 0.88 17250 7491
chr19 18529674 18545372 + SSBP4 ENSG00000130511.11 18529674 0.64 1.0 17251 28738
chr19 18545198 18549111 - ISYNA1 ENSG00000105655.14 18549111 0.83 1.0 17252 48175
chr19 18553473 18632937 - ELL ENSG00000105656.8 18632937 0.66 1.0 17253 68140
chr19 18642561 18654887 - FKBP8 ENSG00000105701.11 18654887 0.6 1.0 17254 46190
chr19 18668572 18680197 + KXD1 ENSG00000105700.6 18668572 0.7 1.0 17255 32505
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 18537
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 1582
Expression level of Genes
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miRNAs possibly regulated by vista28926[chr19:18600936-18601077]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results