EnhancerDB
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  3. vista28927[chr19:18601625-18601886]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28927[chr19:18601625-18601886]
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Tissue distribution of vista28927
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Transcription factor that possibly regulate vista28927[chr19:18601625-18601886]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18601622 18601641 CTCF JASPAR yes 70822842
chr19 18601622 18601641 CTCF JASPAR yes 112741093
chr19 18601626 18601632 YY1 JASPAR yes 70822843
chr19 18601626 18601632 YY1 JASPAR yes 112741094
chr19 18601635 18601647 IRF1 JASPAR yes 70822844
chr19 18601635 18601647 IRF1 JASPAR yes 112741095
chr19 18601648 18601659 CDX2 JASPAR yes 70822845
chr19 18601648 18601659 CDX2 JASPAR yes 112741096
chr19 18601649 18601660 HOXA10 JASPAR yes 70822846
chr19 18601649 18601660 HOXD12 JASPAR yes 70822847
chr19 18601649 18601660 HOXA10 JASPAR yes 112741097
chr19 18601649 18601660 HOXD12 JASPAR yes 112741098
chr19 18601650 18601659 CDX1 JASPAR yes 70822848
chr19 18601650 18601659 CDX1 JASPAR yes 112741099
chr19 18601650 18601660 HOXA13 JASPAR yes 70822849
chr19 18601650 18601660 HOXB13 JASPAR yes 70822850
chr19 18601650 18601660 HOXD13 JASPAR yes 70822851
chr19 18601650 18601660 HOXA13 JASPAR yes 112741100
chr19 18601650 18601660 HOXB13 JASPAR yes 112741101
chr19 18601650 18601660 HOXD13 JASPAR yes 112741102
chr19 18601667 18601671 NFE TRANSFAC yes 70822852
chr19 18601667 18601671 NFE TRANSFAC yes 112741103
chr19 18601667 18601672 GATA1 TRANSFAC yes 70822853
chr19 18601667 18601672 GATA1 TRANSFAC yes 112741104
chr19 18601667 18601673 GATA3 JASPAR yes 70822854
chr19 18601667 18601673 GATA3 JASPAR yes 112741105
chr19 18601677 18601692 TFAP2C JASPAR yes 70822855
chr19 18601677 18601692 TFAP2C JASPAR yes 112741106
chr19 18601682 18601687 TFAP2A TRANSFAC yes 70822856
chr19 18601682 18601687 TFAP2A TRANSFAC yes 112741107
chr19 18601682 18601688 MZF1 JASPAR yes 70822857
chr19 18601682 18601688 MZF1 JASPAR yes 112741108
chr19 18601685 18601696 NFKB1 JASPAR yes 70822858
chr19 18601685 18601696 NFKB1 JASPAR yes 112741109
chr19 18601705 18601718 SMAD2 JASPAR yes 70822859
chr19 18601705 18601718 SMAD2 JASPAR yes 112741110
chr19 18601726 18601745 CTCF JASPAR yes 70822860
chr19 18601726 18601745 CTCF JASPAR yes 112741111
chr19 18601739 18601759 TP53 JASPAR yes 70822861
chr19 18601739 18601759 TP53 JASPAR yes 112741112
chr19 18601771 18601777 YY1 JASPAR yes 70822862
chr19 18601771 18601777 YY1 JASPAR yes 112741113
chr19 18601780 18601791 TBX20 JASPAR yes 70822863
chr19 18601780 18601791 TBX20 JASPAR yes 112741114
chr19 18601780 18601800 TBX19 JASPAR yes 70822864
chr19 18601780 18601800 TBX19 JASPAR yes 112741115
chr19 18601781 18601791 TBX21 JASPAR yes 70822865
chr19 18601781 18601791 TBX21 JASPAR yes 112741116
chr19 18601782 18601798 T JASPAR yes 70822866
chr19 18601782 18601798 T JASPAR yes 112741117
chr19 18601790 18601801 RUNX1 JASPAR yes 70822867
chr19 18601790 18601801 RUNX1 JASPAR yes 112741118
chr19 18601809 18601814 GATA2 JASPAR yes 70822868
chr19 18601809 18601814 GATA2 JASPAR yes 112741119
chr19 18601809 18601821 TAL1 JASPAR yes 70822869
chr19 18601809 18601821 TAL1 JASPAR yes 112741120
chr19 18601809 18601822 ZBTB18 JASPAR yes 70822870
chr19 18601809 18601822 ZBTB18 JASPAR yes 112741121
chr19 18601810 18601828 NFYA JASPAR yes 70822871
chr19 18601810 18601828 NFYA JASPAR yes 112741122
chr19 18601811 18601821 FIGLA JASPAR yes 70822872
chr19 18601811 18601821 MSC JASPAR yes 70822873
chr19 18601811 18601821 TFAP4 JASPAR yes 70822874
chr19 18601811 18601821 FIGLA JASPAR yes 112741123
chr19 18601811 18601821 MSC JASPAR yes 112741124
chr19 18601811 18601821 TFAP4 JASPAR yes 112741125
chr19 18601811 18601823 TAL1 JASPAR yes 70822875
chr19 18601811 18601823 TAL1 JASPAR yes 112741126
chr19 18601820 18601838 NFYA JASPAR yes 70822876
chr19 18601820 18601838 NFYA JASPAR yes 112741127
chr19 18601827 18601837 MYF6 JASPAR yes 70822877
chr19 18601827 18601837 MYF6 JASPAR yes 112741128
chr19 18601837 18601856 RFX2 JASPAR yes 70822878
chr19 18601837 18601856 RFX2 JASPAR yes 112741129
chr19 18601839 18601854 RFX5 JASPAR yes 70822879
chr19 18601839 18601854 RFX5 JASPAR yes 112741130
chr19 18601855 18601859 YY1 TRANSFAC yes 70822880
chr19 18601855 18601859 YY1 TRANSFAC yes 112741131
chr19 18601863 18601874 DUX4 JASPAR yes 70822881
chr19 18601863 18601874 DUX4 JASPAR yes 112741132
chr19 18601868 18601880 POU3F1 JASPAR yes 70822882
chr19 18601868 18601880 POU3F2 JASPAR yes 70822883
chr19 18601868 18601880 POU3F1 JASPAR yes 112741133
chr19 18601868 18601880 POU3F2 JASPAR yes 112741134
chr19 18601868 18601881 POU3F3 JASPAR yes 70822884
chr19 18601868 18601881 POU3F3 JASPAR yes 112741135
chr19 18601872 18601875 MYB TRANSFAC yes 70822885
chr19 18601872 18601875 MYB TRANSFAC yes 112741136
chr19 18601875 18601879 YY1 TRANSFAC yes 70822886
chr19 18601875 18601879 YY1 TRANSFAC yes 112741137
SNP sites on vista28927[chr19:18601625-18601886]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28927[chr19:18601625-18601886]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18501954 18508427 - LRRC25 ENSG00000175489.9 18508427 0.98 0.88 17250 6802
chr19 18529674 18545372 + SSBP4 ENSG00000130511.11 18529674 0.64 1.0 17251 28049
chr19 18545198 18549111 - ISYNA1 ENSG00000105655.14 18549111 0.83 1.0 17252 47486
chr19 18553473 18632937 - ELL ENSG00000105656.8 18632937 0.66 1.0 17253 68949
chr19 18642561 18654887 - FKBP8 ENSG00000105701.11 18654887 0.6 1.0 17254 46999
chr19 18668572 18680197 + KXD1 ENSG00000105700.6 18668572 0.7 1.0 17255 33314
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 19346
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 2391
Expression level of Genes
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miRNAs possibly regulated by vista28927[chr19:18601625-18601886]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results