EnhancerDB
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  3. vista28928[chr19:18603161-18603534]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28928[chr19:18603161-18603534]
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Tissue distribution of vista28928
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Transcription factor that possibly regulate vista28928[chr19:18603161-18603534]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18603157 18603168 ESRRA JASPAR yes 70822887
chr19 18603157 18603168 ESRRB JASPAR yes 70822888
chr19 18603157 18603168 ESRRA JASPAR yes 112741377
chr19 18603157 18603168 ESRRB JASPAR yes 112741378
chr19 18603182 18603187 ETS2 TRANSFAC yes 70822889
chr19 18603182 18603187 ETS2 TRANSFAC yes 112741379
chr19 18603193 18603206 POU2F2 JASPAR yes 70822890
chr19 18603193 18603206 POU2F2 JASPAR yes 112741380
chr19 18603199 18603206 TBP TRANSFAC yes 70822891
chr19 18603199 18603206 TFIID TRANSFAC yes 70822892
chr19 18603199 18603206 TBP TRANSFAC yes 112741381
chr19 18603199 18603206 TFIID TRANSFAC yes 112741382
chr19 18603218 18603222 YY1 TRANSFAC yes 70822893
chr19 18603218 18603222 YY1 TRANSFAC yes 112741383
chr19 18603219 18603227 FEV JASPAR yes 70822894
chr19 18603219 18603227 FEV JASPAR yes 112741384
chr19 18603221 18603226 ETS2 TRANSFAC yes 70822895
chr19 18603221 18603226 ETS2 TRANSFAC yes 112741385
chr19 18603228 18603232 YY1 TRANSFAC yes 70822896
chr19 18603228 18603232 YY1 TRANSFAC yes 112741386
chr19 18603255 18603273 MAFF JASPAR yes 70822897
chr19 18603255 18603273 MAFF JASPAR yes 112741387
chr19 18603256 18603271 MAFK JASPAR yes 70822898
chr19 18603256 18603271 MAFK JASPAR yes 112741388
chr19 18603260 18603271 NRL JASPAR yes 70822899
chr19 18603260 18603271 NRL JASPAR yes 112741389
chr19 18603264 18603279 AR JASPAR yes 70822900
chr19 18603264 18603279 AR JASPAR yes 112741390
chr19 18603267 18603271 NFE TRANSFAC yes 70822901
chr19 18603267 18603271 NFE TRANSFAC yes 112741391
chr19 18603267 18603272 GATA1 TRANSFAC yes 70822902
chr19 18603267 18603272 GATA1 TRANSFAC yes 112741392
chr19 18603267 18603273 GATA3 JASPAR yes 70822903
chr19 18603267 18603273 GATA3 JASPAR yes 112741393
chr19 18603280 18603285 ATF1 TRANSFAC yes 70822904
chr19 18603280 18603285 ATF1 TRANSFAC yes 112741394
chr19 18603300 18603316 SOX4 JASPAR yes 70822905
chr19 18603300 18603316 SOX4 JASPAR yes 112741395
chr19 18603304 18603310 YY1 JASPAR yes 70822906
chr19 18603304 18603310 YY1 JASPAR yes 112741396
chr19 18603317 18603321 NFE TRANSFAC yes 70822907
chr19 18603317 18603321 NFE TRANSFAC yes 112741397
chr19 18603317 18603322 GATA1 TRANSFAC yes 70822908
chr19 18603317 18603322 GATA1 TRANSFAC yes 112741398
chr19 18603317 18603323 GATA3 JASPAR yes 70822909
chr19 18603317 18603323 GATA3 JASPAR yes 112741399
chr19 18603322 18603333 NFKB1 JASPAR yes 70822910
chr19 18603322 18603333 NFKB1 JASPAR yes 112741400
chr19 18603323 18603333 REL JASPAR yes 70822911
chr19 18603323 18603333 REL JASPAR yes 112741401
chr19 18603326 18603340 XBP1 JASPAR yes 70822912
chr19 18603326 18603340 XBP1 JASPAR yes 112741402
chr19 18603329 18603339 NKX2-3 JASPAR yes 70822913
chr19 18603329 18603339 NKX2-3 JASPAR yes 112741403
chr19 18603330 18603339 NKX2-8 JASPAR yes 70822914
chr19 18603330 18603339 NKX2-8 JASPAR yes 112741404
chr19 18603344 18603352 HOXA5 JASPAR yes 70822915
chr19 18603344 18603352 HOXA5 JASPAR yes 112741405
chr19 18603345 18603355 EVX2 JASPAR yes 70822916
chr19 18603345 18603355 LHX2 JASPAR yes 70822917
chr19 18603345 18603355 MEOX1 JASPAR yes 70822918
chr19 18603345 18603355 MEOX2 JASPAR yes 70822919
chr19 18603345 18603355 NOTO JASPAR yes 70822920
chr19 18603345 18603355 POU6F1 JASPAR yes 70822921
chr19 18603345 18603355 EVX2 JASPAR yes 112741406
chr19 18603345 18603355 LHX2 JASPAR yes 112741407
chr19 18603345 18603355 MEOX1 JASPAR yes 112741408
chr19 18603345 18603355 MEOX2 JASPAR yes 112741409
chr19 18603345 18603355 NOTO JASPAR yes 112741410
chr19 18603345 18603355 POU6F1 JASPAR yes 112741411
chr19 18603345 18603357 MEF2B JASPAR yes 70822922
chr19 18603345 18603357 MEF2B JASPAR yes 112741412
chr19 18603346 18603354 LBX1 JASPAR yes 70822923
chr19 18603346 18603354 PDX1 JASPAR yes 70822924
chr19 18603346 18603354 VAX1 JASPAR yes 70822925
chr19 18603346 18603354 VAX2 JASPAR yes 70822926
chr19 18603346 18603354 VSX1 JASPAR yes 70822927
chr19 18603346 18603354 VSX2 JASPAR yes 70822928
chr19 18603346 18603354 LBX1 JASPAR yes 112741413
chr19 18603346 18603354 PDX1 JASPAR yes 112741414
chr19 18603346 18603354 VAX1 JASPAR yes 112741415
chr19 18603346 18603354 VAX2 JASPAR yes 112741416
chr19 18603346 18603354 VSX1 JASPAR yes 112741417
chr19 18603346 18603354 VSX2 JASPAR yes 112741418
chr19 18603346 18603356 MEF2A JASPAR yes 70822929
chr19 18603346 18603356 MEF2A JASPAR yes 112741419
chr19 18603375 18603385 POU6F2 JASPAR yes 70822930
chr19 18603375 18603385 POU6F2 JASPAR yes 112741420
chr19 18603376 18603390 POU4F1 JASPAR yes 70822931
chr19 18603376 18603390 POU4F1 JASPAR yes 112741421
chr19 18603376 18603392 POU4F2 JASPAR yes 70822932
chr19 18603376 18603392 POU4F3 JASPAR yes 70822933
chr19 18603376 18603392 POU4F2 JASPAR yes 112741422
chr19 18603376 18603392 POU4F3 JASPAR yes 112741423
chr19 18603377 18603393 POU4F2 JASPAR yes 70822934
chr19 18603377 18603393 POU4F3 JASPAR yes 70822935
chr19 18603377 18603393 POU4F2 JASPAR yes 112741424
chr19 18603377 18603393 POU4F3 JASPAR yes 112741425
chr19 18603379 18603383 YY1 TRANSFAC yes 70822936
chr19 18603379 18603383 YY1 TRANSFAC yes 112741426
chr19 18603379 18603393 POU4F1 JASPAR yes 70822937
chr19 18603379 18603393 POU4F1 JASPAR yes 112741427
chr19 18603386 18603396 TBX21 JASPAR yes 70822938
chr19 18603386 18603396 TBX21 JASPAR yes 112741428
chr19 18603386 18603397 TBX2 JASPAR yes 70822939
chr19 18603386 18603397 TBX2 JASPAR yes 112741429
chr19 18603386 18603399 EOMES JASPAR yes 70822940
chr19 18603386 18603399 EOMES JASPAR yes 112741430
chr19 18603387 18603397 TBR1 JASPAR yes 70822941
chr19 18603387 18603397 TBR1 JASPAR yes 112741431
chr19 18603410 18603420 RORA JASPAR yes 70822942
chr19 18603410 18603420 RORA JASPAR yes 112741432
chr19 18603413 18603419 ESR1 TRANSFAC yes 70822943
chr19 18603413 18603419 ESR1 TRANSFAC yes 112741433
chr19 18603415 18603419 ESR1 TRANSFAC yes 70822944
chr19 18603415 18603419 ESR1 TRANSFAC yes 112741434
chr19 18603422 18603426 YY1 TRANSFAC yes 70822945
chr19 18603422 18603426 YY1 TRANSFAC yes 112741435
chr19 18603442 18603445 MYB TRANSFAC yes 70822946
chr19 18603442 18603445 MYB TRANSFAC yes 112741436
chr19 18603451 18603467 T JASPAR yes 70822947
chr19 18603451 18603467 T JASPAR yes 112741437
chr19 18603464 18603479 NR2C2 JASPAR yes 70822948
chr19 18603464 18603479 NR2C2 JASPAR yes 112741438
chr19 18603481 18603487 NFIC JASPAR yes 70822949
chr19 18603481 18603487 NFIC JASPAR yes 112741439
chr19 18603485 18603505 TP53 JASPAR yes 70822950
chr19 18603485 18603505 TP53 JASPAR yes 112741440
chr19 18603492 18603498 MZF1 JASPAR yes 70822951
chr19 18603492 18603498 MZF1 JASPAR yes 112741441
SNP sites on vista28928[chr19:18603161-18603534]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28928[chr19:18603161-18603534]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18501954 18508427 - LRRC25 ENSG00000175489.9 18508427 0.98 0.88 17250 5266
chr19 18529674 18545372 + SSBP4 ENSG00000130511.11 18529674 0.64 1.0 17251 26513
chr19 18545198 18549111 - ISYNA1 ENSG00000105655.14 18549111 0.83 1.0 17252 45950
chr19 18553473 18632937 - ELL ENSG00000105656.8 18632937 0.66 1.0 17253 70597
chr19 18642561 18654887 - FKBP8 ENSG00000105701.11 18654887 0.6 1.0 17254 48647
chr19 18668572 18680197 + KXD1 ENSG00000105700.6 18668572 0.7 1.0 17255 34962
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 20994
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 4039
Expression level of Genes
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miRNAs possibly regulated by vista28928[chr19:18603161-18603534]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results