EnhancerDB
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  3. vista2893[chr1:110548379-110548612]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2893[chr1:110548379-110548612]
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Tissue distribution of vista2893
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Transcription factor that possibly regulate vista2893[chr1:110548379-110548612]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110548374 110548389 FOXP1 JASPAR yes 31460884
chr1 110548374 110548389 FOXP1 JASPAR yes 118348829
chr1 110548379 110548394 FOXP1 JASPAR yes 31460885
chr1 110548379 110548394 FOXP1 JASPAR yes 118348830
chr1 110548379 110548400 IRF1 JASPAR yes 31460886
chr1 110548379 110548400 IRF1 JASPAR yes 118348831
chr1 110548380 110548386 TBP TRANSFAC yes 31460887
chr1 110548380 110548386 TBP TRANSFAC yes 118348832
chr1 110548380 110548395 FOXP1 JASPAR yes 31460888
chr1 110548380 110548395 FOXP1 JASPAR yes 118348833
chr1 110548380 110548401 IRF1 JASPAR yes 31460889
chr1 110548380 110548401 IRF1 JASPAR yes 118348834
chr1 110548381 110548396 FOXP1 JASPAR yes 31460890
chr1 110548381 110548396 FOXP1 JASPAR yes 118348835
chr1 110548389 110548403 ONECUT1 JASPAR yes 31460891
chr1 110548389 110548403 ONECUT2 JASPAR yes 31460892
chr1 110548389 110548403 ONECUT3 JASPAR yes 31460893
chr1 110548389 110548403 ONECUT1 JASPAR yes 118348836
chr1 110548389 110548403 ONECUT2 JASPAR yes 118348837
chr1 110548389 110548403 ONECUT3 JASPAR yes 118348838
chr1 110548391 110548402 PHOX2A JASPAR yes 31460894
chr1 110548391 110548402 PROP1 JASPAR yes 31460895
chr1 110548391 110548402 PHOX2A JASPAR yes 118348839
chr1 110548391 110548402 PROP1 JASPAR yes 118348840
chr1 110548392 110548402 PAX3 JASPAR yes 31460896
chr1 110548392 110548402 PAX7 JASPAR yes 31460897
chr1 110548392 110548402 PAX3 JASPAR yes 118348841
chr1 110548392 110548402 PAX7 JASPAR yes 118348842
chr1 110548394 110548403 VENTX JASPAR yes 31460898
chr1 110548394 110548403 VENTX JASPAR yes 118348843
chr1 110548394 110548404 EN2 JASPAR yes 31460899
chr1 110548394 110548404 GBX2 JASPAR yes 31460900
chr1 110548394 110548404 HESX1 JASPAR yes 31460901
chr1 110548394 110548404 LBX2 JASPAR yes 31460902
chr1 110548394 110548404 EN2 JASPAR yes 118348844
chr1 110548394 110548404 GBX2 JASPAR yes 118348845
chr1 110548394 110548404 HESX1 JASPAR yes 118348846
chr1 110548394 110548404 LBX2 JASPAR yes 118348847
chr1 110548395 110548403 LHX9 JASPAR yes 31460903
chr1 110548395 110548403 SHOX JASPAR yes 31460904
chr1 110548395 110548403 LHX9 JASPAR yes 118348848
chr1 110548395 110548403 SHOX JASPAR yes 118348849
chr1 110548412 110548417 ETS2 TRANSFAC yes 31460905
chr1 110548412 110548417 ETS2 TRANSFAC yes 118348850
chr1 110548441 110548451 TEAD1 JASPAR yes 31460906
chr1 110548441 110548451 TEAD1 JASPAR yes 118348851
chr1 110548449 110548452 MYB TRANSFAC yes 31460907
chr1 110548449 110548452 MYB TRANSFAC yes 118348852
chr1 110548512 110548530 MAFF JASPAR yes 31460908
chr1 110548512 110548530 MAFF JASPAR yes 118348853
chr1 110548513 110548519 SOX10 JASPAR yes 31460909
chr1 110548513 110548519 SOX10 JASPAR yes 118348854
chr1 110548513 110548528 MAFK JASPAR yes 31460910
chr1 110548513 110548528 MAFK JASPAR yes 118348855
chr1 110548517 110548528 NRL JASPAR yes 31460911
chr1 110548517 110548528 NRL JASPAR yes 118348856
chr1 110548537 110548557 PPARG JASPAR yes 31460912
chr1 110548537 110548557 PPARG JASPAR yes 118348857
chr1 110548574 110548589 FOXP1 JASPAR yes 31460913
chr1 110548574 110548589 FOXP1 JASPAR yes 118348858
chr1 110548593 110548603 MAX JASPAR yes 31460914
chr1 110548593 110548603 MAX JASPAR yes 118348859
SNP sites on vista2893[chr1:110548379-110548612]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110548579 rs549729144 C G
FOXP1
550414
Genes possibly regulated by vista2893[chr1:110548379-110548612]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110452864 110473614 + CSF1 ENSG00000184371.9 110452864 0.71 0.98 991 4485
chr1 110527308 110566357 + AHCYL1 ENSG00000168710.13 110527308 0.71 1.0 992 78929
chr1 110574199 110617263 + STRIP1 ENSG00000143093.10 110574199 0.6 0.99 993 74413
chr1 110602616 110613322 - ALX3 ENSG00000156150.6 110613322 0.99 1.0 994 35290
Expression level of Genes
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miRNAs possibly regulated by vista2893[chr1:110548379-110548612]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results