EnhancerDB
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  3. vista28937[chr19:18760437-18760612]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28937[chr19:18760437-18760612]
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Tissue distribution of vista28937
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Transcription factor that possibly regulate vista28937[chr19:18760437-18760612]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18760431 18760440 NKX2-8 JASPAR yes 70823550
chr19 18760431 18760440 NKX2-8 JASPAR yes 112747299
chr19 18760431 18760441 NKX2-3 JASPAR yes 70823551
chr19 18760431 18760441 NKX2-3 JASPAR yes 112747300
chr19 18760435 18760445 ETV6 JASPAR yes 70823552
chr19 18760435 18760445 ETV6 JASPAR yes 112747301
chr19 18760445 18760450 SP1 TRANSFAC yes 70823553
chr19 18760445 18760450 SP1 TRANSFAC yes 112747302
chr19 18760479 18760485 SP1 TRANSFAC yes 70823554
chr19 18760479 18760485 SP1 TRANSFAC yes 112747303
chr19 18760479 18760489 SP1 JASPAR yes 70823555
chr19 18760479 18760489 SP1 JASPAR yes 112747304
chr19 18760481 18760486 SP1 TRANSFAC yes 70823556
chr19 18760481 18760486 SP1 TRANSFAC yes 112747305
chr19 18760505 18760518 ZBTB18 JASPAR yes 70823557
chr19 18760505 18760518 ZBTB18 JASPAR yes 112747306
chr19 18760506 18760518 NHLH1 JASPAR yes 70823558
chr19 18760506 18760518 NHLH1 JASPAR yes 112747307
chr19 18760507 18760517 NHLH1 JASPAR yes 70823559
chr19 18760507 18760517 NHLH1 JASPAR yes 112747308
chr19 18760526 18760532 MYC TRANSFAC yes 70823560
chr19 18760526 18760532 MYC TRANSFAC yes 112747309
chr19 18760529 18760539 TBR1 JASPAR yes 70823561
chr19 18760529 18760539 TBR1 JASPAR yes 112747310
chr19 18760531 18760534 MYB TRANSFAC yes 70823562
chr19 18760531 18760534 MYB TRANSFAC yes 112747311
chr19 18760531 18760546 SCRT1 JASPAR yes 70823563
chr19 18760531 18760546 SCRT1 JASPAR yes 112747312
chr19 18760532 18760542 CLOCK JASPAR yes 70823564
chr19 18760532 18760542 MYF6 JASPAR yes 70823565
chr19 18760532 18760542 CLOCK JASPAR yes 112747313
chr19 18760532 18760542 MYF6 JASPAR yes 112747314
chr19 18760541 18760544 MYB TRANSFAC yes 70823566
chr19 18760541 18760544 MYB TRANSFAC yes 112747315
chr19 18760545 18760555 SP1 JASPAR yes 70823567
chr19 18760545 18760555 SP1 JASPAR yes 112747316
chr19 18760550 18760570 TP63 JASPAR yes 70823568
chr19 18760550 18760570 TP63 JASPAR yes 112747317
chr19 18760550 18760571 ZNF263 JASPAR yes 70823569
chr19 18760550 18760571 ZNF263 JASPAR yes 112747318
chr19 18760557 18760568 FLI1 JASPAR yes 70823570
chr19 18760557 18760568 FLI1 JASPAR yes 112747319
chr19 18760559 18760567 EHF JASPAR yes 70823571
chr19 18760559 18760567 EHF JASPAR yes 112747320
chr19 18760564 18760570 NFE2 TRANSFAC yes 70823572
chr19 18760564 18760570 NFE2 TRANSFAC yes 112747321
chr19 18760565 18760579 GLIS3 JASPAR yes 70823573
chr19 18760565 18760579 GLIS3 JASPAR yes 112747322
chr19 18760568 18760588 RREB1 JASPAR yes 70823574
chr19 18760568 18760588 RREB1 JASPAR yes 112747323
chr19 18760569 18760589 RREB1 JASPAR yes 70823575
chr19 18760569 18760589 RREB1 JASPAR yes 112747324
chr19 18760569 18760590 ZNF263 JASPAR yes 70823576
chr19 18760569 18760590 ZNF263 JASPAR yes 112747325
chr19 18760573 18760581 SP1 TRANSFAC yes 70823577
chr19 18760573 18760581 SP1 TRANSFAC yes 112747326
chr19 18760573 18760583 SP1 JASPAR yes 70823578
chr19 18760573 18760583 SP1 JASPAR yes 112747327
chr19 18760574 18760580 SP1 TRANSFAC yes 70823579
chr19 18760574 18760580 SP1 TRANSFAC yes 112747328
chr19 18760574 18760584 SP1 JASPAR yes 70823580
chr19 18760574 18760584 SP1 JASPAR yes 112747329
chr19 18760575 18760582 SP1 TRANSFAC yes 70823581
chr19 18760575 18760582 SP1 TRANSFAC yes 112747330
chr19 18760576 18760581 SP1 TRANSFAC yes 70823582
chr19 18760576 18760581 SP1 TRANSFAC yes 112747331
chr19 18760576 18760582 SP1 TRANSFAC yes 70823583
chr19 18760576 18760582 SP1 TRANSFAC yes 112747332
chr19 18760579 18760589 SP1 JASPAR yes 70823584
chr19 18760579 18760589 SP1 JASPAR yes 112747333
SNP sites on vista28937[chr19:18760437-18760612]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28937[chr19:18760437-18760612]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18668572 18680197 + KXD1 ENSG00000105700.6 18668572 0.7 1.0 17255 8135
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 22103
chr19 18683030 18718551 - CRLF1 ENSG00000006016.6 18718551 0.89 1.0 17257 58114
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 39058
chr19 18718240 18731849 + TMEM59L ENSG00000105696.4 18718240 0.82 1.0 17259 57803
chr19 18747775 18781309 + KLHL26 ENSG00000167487.7 18747775 0.65 1.0 17260 87338
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 66125
Expression level of Genes
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miRNAs possibly regulated by vista28937[chr19:18760437-18760612]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results