EnhancerDB
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  3. vista28939[chr19:18761338-18761719]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28939[chr19:18761338-18761719]
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Tissue distribution of vista28939
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Transcription factor that possibly regulate vista28939[chr19:18761338-18761719]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18761332 18761353 ZNF263 JASPAR yes 70823661
chr19 18761332 18761353 ZNF263 JASPAR yes 112747446
chr19 18761335 18761356 ZNF263 JASPAR yes 70823662
chr19 18761335 18761356 ZNF263 JASPAR yes 112747447
chr19 18761338 18761359 ZNF263 JASPAR yes 70823663
chr19 18761338 18761359 ZNF263 JASPAR yes 112747448
chr19 18761346 18761356 MZF1 JASPAR yes 70823664
chr19 18761346 18761356 MZF1 JASPAR yes 112747449
chr19 18761349 18761355 SP1 TRANSFAC yes 70823665
chr19 18761349 18761355 SP1 TRANSFAC yes 112747450
chr19 18761349 18761359 SP1 JASPAR yes 70823666
chr19 18761349 18761359 SP1 JASPAR yes 112747451
chr19 18761359 18761363 H4TF2 TRANSFAC yes 70823667
chr19 18761359 18761363 H4TF2 TRANSFAC yes 112747452
chr19 18761374 18761378 NFE TRANSFAC yes 70823668
chr19 18761374 18761378 NFE TRANSFAC yes 112747453
chr19 18761381 18761396 ZIC3 JASPAR yes 70823669
chr19 18761381 18761396 ZIC3 JASPAR yes 112747454
chr19 18761381 18761397 GLIS1 JASPAR yes 70823670
chr19 18761381 18761397 GLIS1 JASPAR yes 112747455
chr19 18761382 18761396 GLIS2 JASPAR yes 70823671
chr19 18761382 18761396 GLIS2 JASPAR yes 112747456
chr19 18761392 18761396 ESR1 TRANSFAC yes 70823672
chr19 18761392 18761396 ESR1 TRANSFAC yes 112747457
chr19 18761407 18761419 FOXC2 JASPAR yes 70823673
chr19 18761407 18761419 FOXC2 JASPAR yes 112747458
chr19 18761408 18761416 FOXG1 JASPAR yes 70823674
chr19 18761408 18761416 FOXG1 JASPAR yes 112747459
chr19 18761408 18761419 FOXB1 JASPAR yes 70823675
chr19 18761408 18761419 FOXC1 JASPAR yes 70823676
chr19 18761408 18761419 FOXB1 JASPAR yes 112747460
chr19 18761408 18761419 FOXC1 JASPAR yes 112747461
chr19 18761409 18761420 FOXA1 JASPAR yes 70823677
chr19 18761409 18761420 FOXA1 JASPAR yes 112747462
chr19 18761419 18761426 USF1 JASPAR yes 70823678
chr19 18761419 18761426 USF1 JASPAR yes 112747463
chr19 18761420 18761425 MYC TRANSFAC yes 70823679
chr19 18761420 18761425 USF1 TRANSFAC yes 70823680
chr19 18761420 18761425 USF2 TRANSFAC yes 70823681
chr19 18761420 18761425 MYC TRANSFAC yes 112747464
chr19 18761420 18761425 USF1 TRANSFAC yes 112747465
chr19 18761420 18761425 USF2 TRANSFAC yes 112747466
chr19 18761421 18761432 FOSL2 JASPAR yes 70823682
chr19 18761421 18761432 JUNB JASPAR yes 70823683
chr19 18761421 18761432 FOSL2 JASPAR yes 112747467
chr19 18761421 18761432 JUNB JASPAR yes 112747468
chr19 18761422 18761433 FOS JASPAR yes 70823684
chr19 18761422 18761433 FOSL1 JASPAR yes 70823685
chr19 18761422 18761433 JUND JASPAR yes 70823686
chr19 18761422 18761433 NFE2 JASPAR yes 70823687
chr19 18761422 18761433 FOS JASPAR yes 112747469
chr19 18761422 18761433 FOSL1 JASPAR yes 112747470
chr19 18761422 18761433 JUND JASPAR yes 112747471
chr19 18761422 18761433 NFE2 JASPAR yes 112747472
chr19 18761423 18761432 JDP2 JASPAR yes 70823688
chr19 18761423 18761432 JDP2 JASPAR yes 112747473
chr19 18761423 18761434 FOSL2 JASPAR yes 70823689
chr19 18761423 18761434 JUNB JASPAR yes 70823690
chr19 18761423 18761434 FOSL2 JASPAR yes 112747474
chr19 18761423 18761434 JUNB JASPAR yes 112747475
chr19 18761423 18761437 JUN JASPAR yes 70823691
chr19 18761423 18761437 JUN JASPAR yes 112747476
chr19 18761451 18761459 FOXO3 JASPAR yes 70823692
chr19 18761451 18761459 FOXO3 JASPAR yes 112747477
chr19 18761470 18761476 YY1 JASPAR yes 70823693
chr19 18761470 18761476 YY1 JASPAR yes 112747478
chr19 18761471 18761485 TLX1 JASPAR yes 70823694
chr19 18761471 18761485 TLX1 JASPAR yes 112747479
chr19 18761525 18761529 YY1 TRANSFAC yes 70823695
chr19 18761525 18761529 YY1 TRANSFAC yes 112747480
chr19 18761540 18761558 NFYA JASPAR yes 70823696
chr19 18761540 18761558 NFYA JASPAR yes 112747481
chr19 18761541 18761555 IRF7 JASPAR yes 70823697
chr19 18761541 18761555 IRF7 JASPAR yes 112747482
chr19 18761543 18761559 NFYA JASPAR yes 70823698
chr19 18761543 18761559 NFYA JASPAR yes 112747483
chr19 18761552 18761556 ESR1 TRANSFAC yes 70823699
chr19 18761552 18761556 ESR1 TRANSFAC yes 112747484
chr19 18761564 18761568 LFA1 TRANSFAC yes 70823700
chr19 18761564 18761568 LFA1 TRANSFAC yes 112747485
chr19 18761568 18761579 NRL JASPAR yes 70823701
chr19 18761568 18761579 NRL JASPAR yes 112747486
chr19 18761571 18761584 NR2F1 JASPAR yes 70823702
chr19 18761571 18761584 NR2F1 JASPAR yes 112747487
chr19 18761573 18761584 ESRRA JASPAR yes 70823703
chr19 18761573 18761584 ESRRA JASPAR yes 112747488
chr19 18761574 18761582 NR4A2 JASPAR yes 70823704
chr19 18761574 18761582 NR4A2 JASPAR yes 112747489
chr19 18761575 18761585 RORA JASPAR yes 70823705
chr19 18761575 18761585 RORA JASPAR yes 112747490
chr19 18761575 18761593 SRF JASPAR yes 70823706
chr19 18761575 18761593 SRF JASPAR yes 112747491
chr19 18761615 18761619 NFE TRANSFAC yes 70823707
chr19 18761615 18761619 NFE TRANSFAC yes 112747492
chr19 18761631 18761636 SP1 TRANSFAC yes 70823708
chr19 18761631 18761636 SP1 TRANSFAC yes 112747493
chr19 18761632 18761637 SP1 TRANSFAC yes 70823709
chr19 18761632 18761637 SP1 TRANSFAC yes 112747494
chr19 18761632 18761638 SP1 TRANSFAC yes 70823710
chr19 18761632 18761638 SP1 TRANSFAC yes 112747495
chr19 18761646 18761651 TFAP2A TRANSFAC yes 70823711
chr19 18761646 18761651 TFAP2A TRANSFAC yes 112747496
chr19 18761646 18761652 MZF1 JASPAR yes 70823712
chr19 18761646 18761652 MZF1 JASPAR yes 112747497
chr19 18761650 18761656 YY1 JASPAR yes 70823713
chr19 18761650 18761656 YY1 JASPAR yes 112747498
chr19 18761658 18761663 SP1 TRANSFAC yes 70823714
chr19 18761658 18761663 SP1 TRANSFAC yes 112747499
chr19 18761667 18761684 RARA JASPAR yes 70823715
chr19 18761667 18761684 RARA JASPAR yes 112747500
chr19 18761682 18761697 ZIC3 JASPAR yes 70823716
chr19 18761682 18761697 ZIC4 JASPAR yes 70823717
chr19 18761682 18761697 ZIC3 JASPAR yes 112747501
chr19 18761682 18761697 ZIC4 JASPAR yes 112747502
chr19 18761683 18761697 ZIC1 JASPAR yes 70823718
chr19 18761683 18761697 ZIC1 JASPAR yes 112747503
chr19 18761684 18761704 ESR1 JASPAR yes 70823719
chr19 18761684 18761704 ESR1 JASPAR yes 112747504
chr19 18761688 18761706 ESR2 JASPAR yes 70823720
chr19 18761688 18761706 ESR2 JASPAR yes 112747505
chr19 18761689 18761699 NFKB1 JASPAR yes 70823721
chr19 18761689 18761699 NFKB1 JASPAR yes 112747506
chr19 18761689 18761704 ESR2 JASPAR yes 70823722
chr19 18761689 18761704 ESR2 JASPAR yes 112747507
chr19 18761691 18761704 ELF1 JASPAR yes 70823723
chr19 18761691 18761704 ELF1 JASPAR yes 112747508
chr19 18761698 18761713 NR2C2 JASPAR yes 70823724
chr19 18761698 18761713 NR2C2 JASPAR yes 112747509
SNP sites on vista28939[chr19:18761338-18761719]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28939[chr19:18761338-18761719]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18668572 18680197 + KXD1 ENSG00000105700.6 18668572 0.7 1.0 17255 7234
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 21202
chr19 18683030 18718551 - CRLF1 ENSG00000006016.6 18718551 0.89 1.0 17257 57213
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 38157
chr19 18718240 18731849 + TMEM59L ENSG00000105696.4 18718240 0.82 1.0 17259 56902
chr19 18747775 18781309 + KLHL26 ENSG00000167487.7 18747775 0.65 1.0 17260 86437
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 67232
Expression level of Genes
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miRNAs possibly regulated by vista28939[chr19:18761338-18761719]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results