EnhancerDB
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  3. vista28940[chr19:18768622-18768973]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28940[chr19:18768622-18768973]
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Tissue distribution of vista28940
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Transcription factor that possibly regulate vista28940[chr19:18768622-18768973]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18768504 18768832 EBF1 UCSC Txn Factor no Conserved 108399810
chr19 18768607 18768622 TFAP2A JASPAR yes 70823725
chr19 18768607 18768622 TFAP2A JASPAR yes 112748383
chr19 18768618 18768630 INSM1 JASPAR yes 70823726
chr19 18768618 18768630 INSM1 JASPAR yes 112748388
chr19 18768634 18768640 SP1 TRANSFAC yes 70823727
chr19 18768634 18768640 SP1 TRANSFAC yes 112748389
chr19 18768635 18768640 SP1 TRANSFAC yes 70823728
chr19 18768635 18768640 SP1 TRANSFAC yes 112748390
chr19 18768641 18768656 TFAP2A JASPAR yes 70823729
chr19 18768641 18768656 TFAP2C JASPAR yes 70823730
chr19 18768641 18768656 TFAP2A JASPAR yes 112748391
chr19 18768641 18768656 TFAP2C JASPAR yes 112748392
chr19 18768644 18768655 TFAP2A JASPAR yes 70823731
chr19 18768644 18768655 TFAP2B JASPAR yes 70823732
chr19 18768644 18768655 TFAP2A JASPAR yes 112748393
chr19 18768644 18768655 TFAP2B JASPAR yes 112748394
chr19 18768644 18768657 TFAP2B JASPAR yes 70823733
chr19 18768644 18768657 TFAP2B JASPAR yes 112748395
chr19 18768651 18768656 SP1 TRANSFAC yes 70823734
chr19 18768651 18768656 SP1 TRANSFAC yes 112748396
chr19 18768663 18768667 NFE TRANSFAC yes 70823735
chr19 18768663 18768667 NFE TRANSFAC yes 112748397
chr19 18768664 18768678 EBF1 JASPAR yes 70823736
chr19 18768664 18768678 EBF1 JASPAR yes 112748398
chr19 18768677 18768688 NRL JASPAR yes 70823737
chr19 18768677 18768688 NRL JASPAR yes 112748399
chr19 18768679 18768691 CREB1 JASPAR yes 70823738
chr19 18768679 18768691 CREB1 JASPAR yes 112748400
chr19 18768681 18768695 BATF3 JASPAR yes 70823739
chr19 18768681 18768695 BATF3 JASPAR yes 112748401
chr19 18768682 18768696 XBP1 JASPAR yes 70823740
chr19 18768682 18768696 XBP1 JASPAR yes 112748402
chr19 18768684 18768689 ATF1 TRANSFAC yes 70823741
chr19 18768684 18768689 ATF1 TRANSFAC yes 112748403
chr19 18768697 18768702 SP1 TRANSFAC yes 70823742
chr19 18768697 18768702 SP1 TRANSFAC yes 112748404
chr19 18768697 18768704 SP1 TRANSFAC yes 70823743
chr19 18768697 18768704 SP1 TRANSFAC yes 112748405
chr19 18768714 18768725 GCM1 JASPAR yes 70823744
chr19 18768714 18768725 GCM1 JASPAR yes 112748406
chr19 18768753 18768763 SP1 JASPAR yes 70823745
chr19 18768753 18768763 SP1 JASPAR yes 112748407
chr19 18768762 18768781 REST JASPAR yes 70823746
chr19 18768762 18768781 REST JASPAR yes 112748408
chr19 18768785 18768797 GLI2 JASPAR yes 70823747
chr19 18768785 18768797 GLI2 JASPAR yes 112748409
chr19 18768786 18768796 RUNX3 JASPAR yes 70823748
chr19 18768786 18768796 RUNX3 JASPAR yes 112748410
chr19 18768787 18768806 RFX2 JASPAR yes 70823749
chr19 18768787 18768806 RFX2 JASPAR yes 112748411
chr19 18768791 18768795 ESR1 TRANSFAC yes 70823750
chr19 18768791 18768795 ESR1 TRANSFAC yes 112748412
chr19 18768791 18768807 RFX2 JASPAR yes 70823751
chr19 18768791 18768807 RFX3 JASPAR yes 70823752
chr19 18768791 18768807 RFX4 JASPAR yes 70823753
chr19 18768791 18768807 RFX5 JASPAR yes 70823754
chr19 18768791 18768807 RFX2 JASPAR yes 112748413
chr19 18768791 18768807 RFX3 JASPAR yes 112748414
chr19 18768791 18768807 RFX4 JASPAR yes 112748415
chr19 18768791 18768807 RFX5 JASPAR yes 112748416
chr19 18768792 18768811 RFX2 JASPAR yes 70823755
chr19 18768792 18768811 RFX2 JASPAR yes 112748417
chr19 18768794 18768809 RFX5 JASPAR yes 70823756
chr19 18768794 18768809 RFX5 JASPAR yes 112748418
chr19 18768823 18768829 SOX10 JASPAR yes 70823757
chr19 18768823 18768829 SOX10 JASPAR yes 112748419
chr19 18768826 18768837 FOXH1 JASPAR yes 70823758
chr19 18768826 18768837 FOXH1 JASPAR yes 112748420
chr19 18768835 18768840 SP1 TRANSFAC yes 70823759
chr19 18768835 18768840 SP1 TRANSFAC yes 112748421
chr19 18768841 18768851 SP1 JASPAR yes 70823760
chr19 18768841 18768851 SP1 JASPAR yes 112748422
chr19 18768854 18768868 RXRB JASPAR yes 70823761
chr19 18768854 18768868 RXRB JASPAR yes 112748423
chr19 18768855 18768869 PLAG1 JASPAR yes 70823762
chr19 18768855 18768869 PLAG1 JASPAR yes 112748424
chr19 18768860 18768875 TFAP2A JASPAR yes 70823763
chr19 18768860 18768875 TFAP2A JASPAR yes 112748425
chr19 18768863 18768875 TFAP2A JASPAR yes 70823764
chr19 18768863 18768875 TFAP2B JASPAR yes 70823765
chr19 18768863 18768875 TFAP2C JASPAR yes 70823766
chr19 18768863 18768875 TFAP2A JASPAR yes 112748426
chr19 18768863 18768875 TFAP2B JASPAR yes 112748427
chr19 18768863 18768875 TFAP2C JASPAR yes 112748428
chr19 18768870 18768882 HES5 JASPAR yes 70823767
chr19 18768870 18768882 HES7 JASPAR yes 70823768
chr19 18768870 18768882 HES5 JASPAR yes 112748429
chr19 18768870 18768882 HES7 JASPAR yes 112748430
chr19 18768871 18768881 BHLHE40 JASPAR yes 70823769
chr19 18768871 18768881 BHLHE41 JASPAR yes 70823770
chr19 18768871 18768881 HEY1 JASPAR yes 70823771
chr19 18768871 18768881 HEY2 JASPAR yes 70823772
chr19 18768871 18768881 MAX JASPAR yes 70823773
chr19 18768871 18768881 MNT JASPAR yes 70823774
chr19 18768871 18768881 TFE3 JASPAR yes 70823775
chr19 18768871 18768881 TFEB JASPAR yes 70823776
chr19 18768871 18768881 BHLHE40 JASPAR yes 112748431
chr19 18768871 18768881 BHLHE41 JASPAR yes 112748432
chr19 18768871 18768881 HEY1 JASPAR yes 112748433
chr19 18768871 18768881 HEY2 JASPAR yes 112748434
chr19 18768871 18768881 MAX JASPAR yes 112748435
chr19 18768871 18768881 MNT JASPAR yes 112748436
chr19 18768871 18768881 TFE3 JASPAR yes 112748437
chr19 18768871 18768881 TFEB JASPAR yes 112748438
chr19 18768871 18768882 USF2 JASPAR yes 70823777
chr19 18768871 18768882 USF2 JASPAR yes 112748439
chr19 18768873 18768878 MYC TRANSFAC yes 70823778
chr19 18768873 18768878 USF1 TRANSFAC yes 70823779
chr19 18768873 18768878 USF2 TRANSFAC yes 70823780
chr19 18768873 18768878 MYC TRANSFAC yes 112748440
chr19 18768873 18768878 USF1 TRANSFAC yes 112748441
chr19 18768873 18768878 USF2 TRANSFAC yes 112748442
chr19 18768897 18768909 NHLH1 JASPAR yes 70823781
chr19 18768897 18768909 NHLH1 JASPAR yes 112748443
chr19 18768898 18768908 NHLH1 JASPAR yes 70823782
chr19 18768898 18768908 NHLH1 JASPAR yes 112748444
chr19 18768906 18768921 RFX5 JASPAR yes 70823783
chr19 18768906 18768921 RFX5 JASPAR yes 112748445
chr19 18768908 18768922 PLAG1 JASPAR yes 70823784
chr19 18768908 18768922 PLAG1 JASPAR yes 112748446
chr19 18768915 18768936 ZNF263 JASPAR yes 70823785
chr19 18768915 18768936 ZNF263 JASPAR yes 112748447
chr19 18768916 18768936 RREB1 JASPAR yes 70823786
chr19 18768916 18768936 RREB1 JASPAR yes 112748448
chr19 18768918 18768923 SP1 TRANSFAC yes 70823787
chr19 18768918 18768923 SP1 TRANSFAC yes 112748449
chr19 18768919 18768929 ZNF740 JASPAR yes 70823788
chr19 18768919 18768929 ZNF740 JASPAR yes 112748450
chr19 18768921 18768935 PLAG1 JASPAR yes 70823789
chr19 18768921 18768935 PLAG1 JASPAR yes 112748451
chr19 18768924 18768945 ZNF263 JASPAR yes 70823790
chr19 18768924 18768945 ZNF263 JASPAR yes 112748452
chr19 18768927 18768932 SP1 TRANSFAC yes 70823791
chr19 18768927 18768932 SP1 TRANSFAC yes 112748453
chr19 18768927 18768933 SP1 TRANSFAC yes 70823792
chr19 18768927 18768933 SP1 TRANSFAC yes 112748454
chr19 18768938 18768955 ESR1 JASPAR yes 70823793
chr19 18768938 18768955 ESR1 JASPAR yes 112748455
chr19 18768940 18768944 LFA1 TRANSFAC yes 70823794
chr19 18768940 18768944 LFA1 TRANSFAC yes 112748456
chr19 18768948 18768965 NR3C1 JASPAR yes 70823795
chr19 18768948 18768965 NR3C2 JASPAR yes 70823796
chr19 18768948 18768965 NR3C1 JASPAR yes 112748457
chr19 18768948 18768965 NR3C2 JASPAR yes 112748458
SNP sites on vista28940[chr19:18768622-18768973]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28940[chr19:18768622-18768973]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 13918
chr19 18683030 18718551 - CRLF1 ENSG00000006016.6 18718551 0.89 1.0 17257 49929
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 30873
chr19 18718240 18731849 + TMEM59L ENSG00000105696.4 18718240 0.82 1.0 17259 49618
chr19 18747775 18781309 + KLHL26 ENSG00000167487.7 18747775 0.65 1.0 17260 79153
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 74486
Expression level of Genes
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miRNAs possibly regulated by vista28940[chr19:18768622-18768973]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results