EnhancerDB
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  3. vista28941[chr19:18770076-18770519]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28941[chr19:18770076-18770519]
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Tissue distribution of vista28941
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Transcription factor that possibly regulate vista28941[chr19:18770076-18770519]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18770175 18770415 SPI1 UCSC Txn Factor no Conserved 108399860
chr19 18770096 18770101 NFY TRANSFAC yes 70823797
chr19 18770096 18770101 NFY TRANSFAC yes 112748651
chr19 18770100 18770104 LFA1 TRANSFAC yes 70823798
chr19 18770100 18770104 LFA1 TRANSFAC yes 112748652
chr19 18770127 18770141 ZIC1 JASPAR yes 70823799
chr19 18770127 18770141 ZIC1 JASPAR yes 112748653
chr19 18770127 18770142 ZIC3 JASPAR yes 70823800
chr19 18770127 18770142 ZIC3 JASPAR yes 112748654
chr19 18770136 18770140 NFE TRANSFAC yes 70823801
chr19 18770136 18770140 NFE TRANSFAC yes 112748655
chr19 18770146 18770161 AR JASPAR yes 70823802
chr19 18770146 18770161 AR JASPAR yes 112748656
chr19 18770146 18770163 NR3C1 JASPAR yes 70823803
chr19 18770146 18770163 NR3C1 JASPAR yes 112748657
chr19 18770159 18770165 MZF1 JASPAR yes 70823804
chr19 18770159 18770165 MZF1 JASPAR yes 112748658
chr19 18770177 18770192 TFAP2C JASPAR yes 70823805
chr19 18770177 18770192 TFAP2C JASPAR yes 112748659
chr19 18770178 18770189 TFAP2A JASPAR yes 70823806
chr19 18770178 18770189 TFAP2B JASPAR yes 70823807
chr19 18770178 18770189 TFAP2A JASPAR yes 112748660
chr19 18770178 18770189 TFAP2B JASPAR yes 112748661
chr19 18770179 18770188 TFAP2A JASPAR yes 70823808
chr19 18770179 18770188 TFAP2A JASPAR yes 112748662
chr19 18770184 18770189 SP1 TRANSFAC yes 70823809
chr19 18770184 18770189 SP1 TRANSFAC yes 112748663
chr19 18770204 18770217 SMAD2 JASPAR yes 70823810
chr19 18770204 18770217 SMAD2 JASPAR yes 112748664
chr19 18770205 18770210 SP1 TRANSFAC yes 70823811
chr19 18770205 18770210 SP1 TRANSFAC yes 112748665
chr19 18770209 18770227 NFYA JASPAR yes 70823812
chr19 18770209 18770227 NFYA JASPAR yes 112748666
chr19 18770214 18770226 TAL1 JASPAR yes 70823813
chr19 18770214 18770226 TAL1 JASPAR yes 112748667
chr19 18770214 18770227 ZBTB18 JASPAR yes 70823814
chr19 18770214 18770227 ZBTB18 JASPAR yes 112748668
chr19 18770215 18770227 NHLH1 JASPAR yes 70823815
chr19 18770215 18770227 NHLH1 JASPAR yes 112748669
chr19 18770216 18770226 FIGLA JASPAR yes 70823816
chr19 18770216 18770226 MSC JASPAR yes 70823817
chr19 18770216 18770226 TFAP4 JASPAR yes 70823818
chr19 18770216 18770226 FIGLA JASPAR yes 112748670
chr19 18770216 18770226 MSC JASPAR yes 112748671
chr19 18770216 18770226 TFAP4 JASPAR yes 112748672
chr19 18770247 18770257 MAX JASPAR yes 70823819
chr19 18770247 18770257 MAX JASPAR yes 112748673
chr19 18770251 18770272 IRF1 JASPAR yes 70823820
chr19 18770251 18770272 IRF1 JASPAR yes 112748674
chr19 18770255 18770266 CDX2 JASPAR yes 70823821
chr19 18770255 18770266 CDX2 JASPAR yes 112748675
chr19 18770255 18770273 IRF2 JASPAR yes 70823822
chr19 18770255 18770273 IRF2 JASPAR yes 112748676
chr19 18770256 18770267 HOXA10 JASPAR yes 70823823
chr19 18770256 18770267 HOXA10 JASPAR yes 112748677
chr19 18770257 18770266 CDX1 JASPAR yes 70823824
chr19 18770257 18770266 CDX1 JASPAR yes 112748678
chr19 18770257 18770267 HOXA13 JASPAR yes 70823825
chr19 18770257 18770267 HOXB13 JASPAR yes 70823826
chr19 18770257 18770267 HOXD13 JASPAR yes 70823827
chr19 18770257 18770267 HOXA13 JASPAR yes 112748679
chr19 18770257 18770267 HOXB13 JASPAR yes 112748680
chr19 18770257 18770267 HOXD13 JASPAR yes 112748681
chr19 18770257 18770278 IRF1 JASPAR yes 70823828
chr19 18770257 18770278 IRF1 JASPAR yes 112748682
chr19 18770259 18770274 IRF9 JASPAR yes 70823829
chr19 18770259 18770274 IRF9 JASPAR yes 112748683
chr19 18770275 18770296 IRF1 JASPAR yes 70823830
chr19 18770275 18770296 IRF1 JASPAR yes 112748684
chr19 18770278 18770292 IRF7 JASPAR yes 70823831
chr19 18770278 18770292 IRF8 JASPAR yes 70823832
chr19 18770278 18770292 IRF7 JASPAR yes 112748685
chr19 18770278 18770292 IRF8 JASPAR yes 112748686
chr19 18770279 18770293 SPI1 JASPAR yes 70823833
chr19 18770279 18770293 SPI1 JASPAR yes 112748687
chr19 18770283 18770293 ETV6 JASPAR yes 70823834
chr19 18770283 18770293 ETV6 JASPAR yes 112748688
chr19 18770301 18770313 E2F8 JASPAR yes 70823835
chr19 18770301 18770313 E2F8 JASPAR yes 112748689
chr19 18770305 18770315 ETV6 JASPAR yes 70823836
chr19 18770305 18770315 ETV6 JASPAR yes 112748690
chr19 18770307 18770312 ETS2 TRANSFAC yes 70823837
chr19 18770307 18770312 ETS2 TRANSFAC yes 112748691
chr19 18770346 18770350 LFA1 TRANSFAC yes 70823838
chr19 18770346 18770350 LFA1 TRANSFAC yes 112748692
chr19 18770366 18770385 REST JASPAR yes 70823839
chr19 18770366 18770385 REST JASPAR yes 112748693
chr19 18770386 18770400 GLIS2 JASPAR yes 70823840
chr19 18770386 18770400 GLIS2 JASPAR yes 112748694
chr19 18770392 18770402 ZNF740 JASPAR yes 70823841
chr19 18770392 18770402 ZNF740 JASPAR yes 112748695
chr19 18770396 18770407 E2F6 JASPAR yes 70823842
chr19 18770396 18770407 E2F6 JASPAR yes 112748696
chr19 18770397 18770402 SP1 TRANSFAC yes 70823843
chr19 18770397 18770402 SP1 TRANSFAC yes 112748697
chr19 18770425 18770431 HiNF-A TRANSFAC yes 70823844
chr19 18770425 18770431 HiNF-A TRANSFAC yes 112748698
chr19 18770430 18770438 FOXO3 JASPAR yes 70823845
chr19 18770430 18770438 FOXO3 JASPAR yes 112748699
chr19 18770430 18770440 NFATC3 JASPAR yes 70823846
chr19 18770430 18770440 NFATC3 JASPAR yes 112748700
chr19 18770430 18770445 STAT1 JASPAR yes 70823847
chr19 18770430 18770445 STAT1 JASPAR yes 112748701
chr19 18770432 18770443 STAT1 JASPAR yes 70823848
chr19 18770432 18770443 STAT3 JASPAR yes 70823849
chr19 18770432 18770443 STAT1 JASPAR yes 112748702
chr19 18770432 18770443 STAT3 JASPAR yes 112748703
chr19 18770443 18770457 STAT1 JASPAR yes 70823850
chr19 18770443 18770457 STAT1 JASPAR yes 112748704
chr19 18770455 18770476 IRF1 JASPAR yes 70823851
chr19 18770455 18770476 IRF1 JASPAR yes 112748705
chr19 18770456 18770477 IRF1 JASPAR yes 70823852
chr19 18770456 18770477 IRF1 JASPAR yes 112748706
chr19 18770460 18770475 FOXP1 JASPAR yes 70823853
chr19 18770460 18770475 FOXP1 JASPAR yes 112748707
chr19 18770461 18770476 FOXP1 JASPAR yes 70823854
chr19 18770461 18770476 FOXP1 JASPAR yes 112748708
chr19 18770462 18770477 FOXP1 JASPAR yes 70823855
chr19 18770462 18770477 FOXP1 JASPAR yes 112748709
chr19 18770466 18770480 IRF7 JASPAR yes 70823856
chr19 18770466 18770480 IRF7 JASPAR yes 112748710
chr19 18770467 18770485 SRF JASPAR yes 70823857
chr19 18770467 18770485 SRF JASPAR yes 112748711
chr19 18770477 18770487 RELA JASPAR yes 70823858
chr19 18770477 18770487 REL JASPAR yes 70823859
chr19 18770477 18770487 RELA JASPAR yes 112748712
chr19 18770477 18770487 REL JASPAR yes 112748713
chr19 18770477 18770488 NFKB1 JASPAR yes 70823860
chr19 18770477 18770488 NFKB1 JASPAR yes 112748714
chr19 18770479 18770489 TEAD1 JASPAR yes 70823861
chr19 18770479 18770489 TEAD4 JASPAR yes 70823862
chr19 18770479 18770489 TEAD1 JASPAR yes 112748715
chr19 18770479 18770489 TEAD4 JASPAR yes 112748716
chr19 18770479 18770491 TEAD1 JASPAR yes 70823863
chr19 18770479 18770491 TEAD1 JASPAR yes 112748717
chr19 18770480 18770488 TEAD3 JASPAR yes 70823864
chr19 18770480 18770488 TEAD3 JASPAR yes 112748718
chr19 18770485 18770489 H1TF2 TRANSFAC yes 70823865
chr19 18770485 18770489 NFE TRANSFAC yes 70823866
chr19 18770485 18770489 SRF TRANSFAC yes 70823867
chr19 18770485 18770489 H1TF2 TRANSFAC yes 112748719
chr19 18770485 18770489 NFE TRANSFAC yes 112748720
chr19 18770485 18770489 SRF TRANSFAC yes 112748721
SNP sites on vista28941[chr19:18770076-18770519]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28941[chr19:18770076-18770519]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18682540 18688360 + UBA52 ENSG00000221983.3 18682540 0.77 1.0 17256 12464
chr19 18683030 18718551 - CRLF1 ENSG00000006016.6 18718551 0.89 1.0 17257 48475
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 29419
chr19 18718240 18731849 + TMEM59L ENSG00000105696.4 18718240 0.82 1.0 17259 48164
chr19 18747775 18781309 + KLHL26 ENSG00000167487.7 18747775 0.65 1.0 17260 77699
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 76032
Expression level of Genes
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miRNAs possibly regulated by vista28941[chr19:18770076-18770519]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results