EnhancerDB
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  3. vista28942[chr19:18793678-18793914]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28942[chr19:18793678-18793914]
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Tissue distribution of vista28942
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Transcription factor that possibly regulate vista28942[chr19:18793678-18793914]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18793820 18795264 POLR2A UCSC Txn Factor no Conserved 108399881
chr19 18793678 18793693 FOXP1 JASPAR yes 70823868
chr19 18793678 18793699 IRF1 JASPAR yes 70823869
chr19 18793679 18793694 FOXP1 JASPAR yes 70823870
chr19 18793679 18793700 IRF1 JASPAR yes 70823871
chr19 18793680 18793695 FOXP1 JASPAR yes 70823872
chr19 18793680 18793701 IRF1 JASPAR yes 70823873
chr19 18793681 18793696 FOXP1 JASPAR yes 70823874
chr19 18793681 18793702 IRF1 JASPAR yes 70823875
chr19 18793682 18793697 FOXP1 JASPAR yes 70823876
chr19 18793682 18793703 IRF1 JASPAR yes 70823877
chr19 18793683 18793698 FOXP1 JASPAR yes 70823878
chr19 18793683 18793704 IRF1 JASPAR yes 70823879
chr19 18793684 18793699 FOXP1 JASPAR yes 70823880
chr19 18793686 18793701 FOXP1 JASPAR yes 70823881
chr19 18793687 18793708 IRF1 JASPAR yes 70823882
chr19 18793688 18793703 FOXP1 JASPAR yes 70823883
chr19 18793689 18793704 IRF9 JASPAR yes 70823884
chr19 18793691 18793705 SPIC JASPAR yes 70823885
chr19 18793691 18793705 STAT1 JASPAR yes 70823886
chr19 18793691 18793706 PRDM1 JASPAR yes 70823887
chr19 18793691 18793706 STAT2 JASPAR yes 70823888
chr19 18793701 18793712 HOXC11 JASPAR yes 70823889
chr19 18793707 18793716 THAP1 JASPAR yes 70823890
chr19 18793710 18793714 LFA1 TRANSFAC yes 70823891
chr19 18793710 18793723 SCRT2 JASPAR yes 70823892
chr19 18793743 18793757 NR2F1 JASPAR yes 70823893
chr19 18793771 18793774 MYB TRANSFAC yes 70823894
chr19 18793775 18793781 ETS1 JASPAR yes 70823895
chr19 18793776 18793786 MZF1 JASPAR yes 70823896
chr19 18793786 18793790 NFE TRANSFAC yes 70823897
chr19 18793807 18793818 E2F6 JASPAR yes 70823898
chr19 18793820 18793835 RUNX2 JASPAR yes 70823899
chr19 18793845 18793849 YY1 TRANSFAC yes 70823900
chr19 18793859 18793863 YY1 TRANSFAC yes 70823901
chr19 18793885 18793897 FOXI1 JASPAR yes 70823902
chr19 18793888 18793892 YY1 TRANSFAC yes 70823903
chr19 18793900 18793913 SMAD2 JASPAR yes 70823904
chr19 18793904 18793910 NFE2 TRANSFAC yes 70823905
SNP sites on vista28942[chr19:18793678-18793914]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28942[chr19:18793678-18793914]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18683030 18718551 - CRLF1 ENSG00000006016.6 18718551 0.89 1.0 17257 24873
chr19 18699495 18703146 + C19orf60 ENSG00000006015.13 18699495 0.56 1.0 17258 5817
chr19 18718240 18731849 + TMEM59L ENSG00000105696.4 18718240 0.82 1.0 17259 24562
chr19 18747775 18781309 + KLHL26 ENSG00000167487.7 18747775 0.65 1.0 17260 54097
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 99427
Expression level of Genes
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miRNAs possibly regulated by vista28942[chr19:18793678-18793914]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results