EnhancerDB
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  3. vista28944[chr19:18811913-18812040]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28944[chr19:18811913-18812040]
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Tissue distribution of vista28944
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Transcription factor that possibly regulate vista28944[chr19:18811913-18812040]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18811461 18812156 ZNF263 UCSC Txn Factor no Conserved 108399885
chr19 18811766 18812019 TAL1 UCSC Txn Factor no Conserved 108399913
chr19 18811791 18811982 TEAD4 UCSC Txn Factor no Conserved 108399920
chr19 18811930 18811939 PITX3 JASPAR yes 70823930
chr19 18811930 18811939 PITX3 JASPAR yes 112750897
chr19 18811930 18811940 GSC2 JASPAR yes 70823931
chr19 18811930 18811940 GSC JASPAR yes 70823932
chr19 18811930 18811940 GSC2 JASPAR yes 112750898
chr19 18811930 18811940 GSC JASPAR yes 112750899
chr19 18811931 18811939 OTX1 JASPAR yes 70823933
chr19 18811931 18811939 OTX1 JASPAR yes 112750900
chr19 18811958 18811962 LFA1 TRANSFAC yes 70823934
chr19 18811958 18811962 LFA1 TRANSFAC yes 112750901
chr19 18811979 18811983 H4TF2 TRANSFAC yes 70823935
chr19 18811979 18811983 H4TF2 TRANSFAC yes 112750902
chr19 18811983 18811997 ZIC1 JASPAR yes 70823936
chr19 18811983 18811997 ZIC1 JASPAR yes 112750903
chr19 18812004 18812019 ZBTB33 JASPAR yes 70823937
chr19 18812004 18812019 ZBTB33 JASPAR yes 112750904
chr19 18812013 18812020 SP1 TRANSFAC yes 70823938
chr19 18812013 18812020 SP1 TRANSFAC yes 112750905
chr19 18812013 18812023 SP1 JASPAR yes 70823939
chr19 18812013 18812023 SP1 JASPAR yes 112750906
chr19 18812014 18812021 SP1 TRANSFAC yes 70823940
chr19 18812014 18812021 SP1 TRANSFAC yes 112750907
chr19 18812015 18812020 SP1 TRANSFAC yes 70823941
chr19 18812015 18812020 SP1 TRANSFAC yes 112750908
chr19 18812015 18812021 SP1 TRANSFAC yes 70823942
chr19 18812015 18812021 SP1 TRANSFAC yes 112750909
chr19 18812015 18812022 SP1 TRANSFAC yes 70823943
chr19 18812015 18812022 SP1 TRANSFAC yes 112750910
chr19 18812017 18812028 EBF1 JASPAR yes 70823944
chr19 18812017 18812028 EBF1 JASPAR yes 112750911
chr19 18812025 18812036 TFAP2A JASPAR yes 70823945
chr19 18812025 18812036 TFAP2B JASPAR yes 70823946
chr19 18812025 18812036 TFAP2C JASPAR yes 70823947
chr19 18812025 18812036 TFAP2A JASPAR yes 112750912
chr19 18812025 18812036 TFAP2B JASPAR yes 112750913
chr19 18812025 18812036 TFAP2C JASPAR yes 112750914
chr19 18812026 18812035 TFAP2A JASPAR yes 70823948
chr19 18812026 18812035 TFAP2A JASPAR yes 112750915
SNP sites on vista28944[chr19:18811913-18812040]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28944[chr19:18811913-18812040]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18683030 18718551 - CRLF1 ENSG00000006016.6 18718551 0.89 1.0 17257 6638
chr19 18718240 18731849 + TMEM59L ENSG00000105696.4 18718240 0.82 1.0 17259 6327
chr19 18747775 18781309 + KLHL26 ENSG00000167487.7 18747775 0.65 1.0 17260 35862
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 82574
chr19 18893583 18902123 - COMP ENSG00000105664.6 18902123 0.83 0.99 17262 9917
Expression level of Genes
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miRNAs possibly regulated by vista28944[chr19:18811913-18812040]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results