EnhancerDB
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  3. vista28945[chr19:18852715-18852875]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28945[chr19:18852715-18852875]
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Tissue distribution of vista28945
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Transcription factor that possibly regulate vista28945[chr19:18852715-18852875]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18852499 18852877 FOXA1 UCSC Txn Factor no Conserved 108399932
chr19 18852704 18852719 ESR2 JASPAR yes 70823949
chr19 18852704 18852719 ESR2 JASPAR yes 112755311
chr19 18852744 18852749 ETS2 TRANSFAC yes 70823950
chr19 18852744 18852749 ETS2 TRANSFAC yes 112755313
chr19 18852760 18852775 FOXA1 JASPAR yes 70823951
chr19 18852760 18852775 FOXA1 JASPAR yes 112755314
chr19 18852765 18852782 NR3C1 JASPAR yes 70823952
chr19 18852765 18852782 NR3C2 JASPAR yes 70823953
chr19 18852765 18852782 NR3C1 JASPAR yes 112755315
chr19 18852765 18852782 NR3C2 JASPAR yes 112755316
chr19 18852777 18852796 RFX2 JASPAR yes 70823954
chr19 18852777 18852796 RFX2 JASPAR yes 112755317
chr19 18852779 18852794 RFX5 JASPAR yes 70823955
chr19 18852779 18852794 RFX5 JASPAR yes 112755318
chr19 18852790 18852795 SP1 TRANSFAC yes 70823956
chr19 18852790 18852795 SP1 TRANSFAC yes 112755319
chr19 18852790 18852796 SP1 TRANSFAC yes 70823957
chr19 18852790 18852796 SP1 TRANSFAC yes 112755320
chr19 18852812 18852824 ZBTB7A JASPAR yes 70823958
chr19 18852812 18852824 ZBTB7A JASPAR yes 112755321
chr19 18852820 18852826 SP1 TRANSFAC yes 70823959
chr19 18852820 18852826 SP1 TRANSFAC yes 112755322
chr19 18852820 18852830 SP1 JASPAR yes 70823960
chr19 18852820 18852830 SP1 JASPAR yes 112755323
chr19 18852820 18852841 ZNF263 JASPAR yes 70823961
chr19 18852820 18852841 ZNF263 JASPAR yes 112755324
chr19 18852823 18852834 FLI1 JASPAR yes 70823962
chr19 18852823 18852834 FLI1 JASPAR yes 112755325
chr19 18852825 18852833 EHF JASPAR yes 70823963
chr19 18852825 18852833 EHF JASPAR yes 112755326
chr19 18852825 18852846 ZNF263 JASPAR yes 70823964
chr19 18852825 18852846 ZNF263 JASPAR yes 112755327
chr19 18852837 18852845 SP1 TRANSFAC yes 70823965
chr19 18852837 18852845 SP1 TRANSFAC yes 112755328
chr19 18852873 18852878 MYC TRANSFAC yes 70823966
chr19 18852873 18852878 MYC TRANSFAC yes 112755329
SNP sites on vista28945[chr19:18852715-18852875]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28945[chr19:18852715-18852875]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 41772
chr19 18893583 18902123 - COMP ENSG00000105664.6 18902123 0.83 0.99 17262 50752
chr19 18942747 18979045 + UPF1 ENSG00000005007.8 18942747 0.6 1.0 17263 10128
Expression level of Genes
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miRNAs possibly regulated by vista28945[chr19:18852715-18852875]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results