EnhancerDB
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  3. vista28946[chr19:18874702-18875152]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28946[chr19:18874702-18875152]
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Tissue distribution of vista28946
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Transcription factor that possibly regulate vista28946[chr19:18874702-18875152]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18874792 18875092 ESR1 UCSC Txn Factor no Conserved 108399955
chr19 18874830 18875305 E2F1 UCSC Txn Factor no Conserved 108399958
chr19 18874833 18875288 GATA1 UCSC Txn Factor no Conserved 108399960
chr19 18874845 18875301 JUND UCSC Txn Factor no Conserved 108399961
chr19 18874891 18875452 GATA2 UCSC Txn Factor no Conserved 108399968
chr19 18874917 18875169 EGR1 UCSC Txn Factor no Conserved 108399972
chr19 18874918 18875217 FOS UCSC Txn Factor no Conserved 108399974
chr19 18874931 18875503 GATA3 UCSC Txn Factor no Conserved 108399975
chr19 18874703 18874724 REST JASPAR yes 70823967
chr19 18874703 18874724 REST JASPAR yes 112756544
chr19 18874796 18874813 RARA JASPAR yes 70823968
chr19 18874796 18874813 RARA JASPAR yes 112756545
chr19 18874797 18874816 CTCF JASPAR yes 70823969
chr19 18874797 18874816 CTCF JASPAR yes 112756546
chr19 18874802 18874808 TCF4 TRANSFAC yes 70823970
chr19 18874802 18874808 TCF4 TRANSFAC yes 112756547
chr19 18874822 18874827 TFAP2A TRANSFAC yes 70823971
chr19 18874822 18874827 TFAP2A TRANSFAC yes 112756548
chr19 18874822 18874828 MZF1 JASPAR yes 70823972
chr19 18874822 18874828 MZF1 JASPAR yes 112756549
chr19 18874850 18874866 ZNF143 JASPAR yes 70823973
chr19 18874850 18874866 ZNF143 JASPAR yes 112756550
chr19 18874858 18874877 PAX5 JASPAR yes 70823974
chr19 18874858 18874877 PAX5 JASPAR yes 112756551
chr19 18874882 18874886 LFA1 TRANSFAC yes 70823975
chr19 18874882 18874886 LFA1 TRANSFAC yes 112756552
chr19 18874891 18874901 ETV6 JASPAR yes 70823976
chr19 18874891 18874901 ETV6 JASPAR yes 112756553
chr19 18874893 18874898 ETS2 TRANSFAC yes 70823977
chr19 18874893 18874898 ETS2 TRANSFAC yes 112756554
chr19 18874903 18874921 TP63 JASPAR yes 70823978
chr19 18874903 18874921 TP73 JASPAR yes 70823979
chr19 18874903 18874921 TP63 JASPAR yes 112756555
chr19 18874903 18874921 TP73 JASPAR yes 112756556
chr19 18874926 18874938 NHLH1 JASPAR yes 70823980
chr19 18874926 18874938 NHLH1 JASPAR yes 112756557
chr19 18874927 18874937 NHLH1 JASPAR yes 70823981
chr19 18874927 18874937 NHLH1 JASPAR yes 112756558
chr19 18874928 18874949 REST JASPAR yes 70823982
chr19 18874928 18874949 REST JASPAR yes 112756559
chr19 18874934 18874943 TFAP2A JASPAR yes 70823983
chr19 18874934 18874943 TFAP2A JASPAR yes 112756560
chr19 18874939 18874943 LFA1 TRANSFAC yes 70823984
chr19 18874939 18874943 LFA1 TRANSFAC yes 112756561
chr19 18874952 18874960 MEIS2 JASPAR yes 70823985
chr19 18874952 18874960 MEIS3 JASPAR yes 70823986
chr19 18874952 18874960 MEIS2 JASPAR yes 112756562
chr19 18874952 18874960 MEIS3 JASPAR yes 112756563
chr19 18874953 18874957 NFE TRANSFAC yes 70823987
chr19 18874953 18874957 NFE TRANSFAC yes 112756564
chr19 18874981 18874996 RFX5 JASPAR yes 70823988
chr19 18874981 18874996 RFX5 JASPAR yes 112756565
chr19 18874984 18874998 EBF1 JASPAR yes 70823989
chr19 18874984 18874998 EBF1 JASPAR yes 112756566
chr19 18874985 18874996 EBF1 JASPAR yes 70823990
chr19 18874985 18874996 EBF1 JASPAR yes 112756567
chr19 18874986 18874997 EBF1 JASPAR yes 70823991
chr19 18874986 18874997 EBF1 JASPAR yes 112756568
chr19 18875046 18875057 EBF1 JASPAR yes 70823992
chr19 18875046 18875057 EBF1 JASPAR yes 112756569
chr19 18875051 18875061 SREBF1 JASPAR yes 70823993
chr19 18875051 18875061 SREBF2 JASPAR yes 70823994
chr19 18875051 18875061 SREBF1 JASPAR yes 112756570
chr19 18875051 18875061 SREBF2 JASPAR yes 112756571
chr19 18875051 18875065 JUN JASPAR yes 70823995
chr19 18875051 18875065 JUN JASPAR yes 112756572
chr19 18875054 18875065 FOSL2 JASPAR yes 70823996
chr19 18875054 18875065 JUNB JASPAR yes 70823997
chr19 18875054 18875065 FOSL2 JASPAR yes 112756573
chr19 18875054 18875065 JUNB JASPAR yes 112756574
chr19 18875055 18875066 FOS JASPAR yes 70823998
chr19 18875055 18875066 FOSL1 JASPAR yes 70823999
chr19 18875055 18875066 JUND JASPAR yes 70824000
chr19 18875055 18875066 NFE2 JASPAR yes 70824001
chr19 18875055 18875066 FOS JASPAR yes 112756575
chr19 18875055 18875066 FOSL1 JASPAR yes 112756576
chr19 18875055 18875066 JUND JASPAR yes 112756577
chr19 18875055 18875066 NFE2 JASPAR yes 112756578
chr19 18875057 18875064 JUN TRANSFAC yes 70824002
chr19 18875057 18875064 JUN TRANSFAC yes 112756579
chr19 18875063 18875068 SP1 TRANSFAC yes 70824003
chr19 18875063 18875068 SP1 TRANSFAC yes 112756580
chr19 18875075 18875081 SP1 TRANSFAC yes 70824004
chr19 18875075 18875081 SP1 TRANSFAC yes 112756581
chr19 18875090 18875103 ZBTB18 JASPAR yes 70824005
chr19 18875090 18875103 ZBTB18 JASPAR yes 112756582
chr19 18875114 18875127 NR2F1 JASPAR yes 70824006
chr19 18875114 18875127 NR2F1 JASPAR yes 112756583
chr19 18875116 18875131 JUND JASPAR yes 70824007
chr19 18875116 18875131 JUND JASPAR yes 112756584
chr19 18875117 18875130 JUN JASPAR yes 70824008
chr19 18875117 18875130 JUN JASPAR yes 112756585
chr19 18875118 18875126 CREB1 JASPAR yes 70824009
chr19 18875118 18875126 CREB1 JASPAR yes 112756586
chr19 18875118 18875135 RARA JASPAR yes 70824010
chr19 18875118 18875135 RARA JASPAR yes 112756587
chr19 18875134 18875148 TCF7L2 JASPAR yes 70824011
chr19 18875134 18875148 TCF7L2 JASPAR yes 112756588
chr19 18875150 18875156 SP1 TRANSFAC yes 70824012
chr19 18875150 18875156 SP1 TRANSFAC yes 112756589
chr19 18875151 18875156 SP1 TRANSFAC yes 70824013
chr19 18875151 18875156 SP1 TRANSFAC yes 112756590
SNP sites on vista28946[chr19:18874702-18875152]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28946[chr19:18874702-18875152]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18794487 18893004 + CRTC1 ENSG00000105662.11 18794487 0.76 1.0 17261 19785
chr19 18893583 18902123 - COMP ENSG00000105664.6 18902123 0.83 0.99 17262 73029
chr19 18942747 18979045 + UPF1 ENSG00000005007.8 18942747 0.6 1.0 17263 32405
Expression level of Genes
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miRNAs possibly regulated by vista28946[chr19:18874702-18875152]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results