EnhancerDB
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  3. vista28947[chr19:18960289-18960480]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28947[chr19:18960289-18960480]
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Tissue distribution of vista28947
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Transcription factor that possibly regulate vista28947[chr19:18960289-18960480]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 18960283 18960291 EHF JASPAR yes 70824014
chr19 18960283 18960291 EHF JASPAR yes 112761146
chr19 18960308 18960319 TBX20 JASPAR yes 70824015
chr19 18960308 18960319 TBX20 JASPAR yes 112761147
chr19 18960309 18960323 MTF1 JASPAR yes 70824016
chr19 18960309 18960323 MTF1 JASPAR yes 112761148
chr19 18960319 18960328 TFAP2A JASPAR yes 70824017
chr19 18960319 18960328 TFAP2A JASPAR yes 112761149
chr19 18960338 18960343 SP1 TRANSFAC yes 70824018
chr19 18960338 18960343 SP1 TRANSFAC yes 112761150
chr19 18960338 18960344 SP1 TRANSFAC yes 70824019
chr19 18960338 18960344 SP1 TRANSFAC yes 112761151
chr19 18960338 18960345 SP1 TRANSFAC yes 70824020
chr19 18960338 18960345 SP1 TRANSFAC yes 112761152
chr19 18960339 18960347 WT1 TRANSFAC yes 70824021
chr19 18960339 18960347 WT1 TRANSFAC yes 112761153
chr19 18960342 18960348 SP1 TRANSFAC yes 70824022
chr19 18960342 18960348 SP1 TRANSFAC yes 112761154
chr19 18960342 18960352 SP1 JASPAR yes 70824023
chr19 18960342 18960352 SP1 JASPAR yes 112761155
chr19 18960377 18960387 NFKB1 JASPAR yes 70824024
chr19 18960377 18960387 RELA JASPAR yes 70824025
chr19 18960377 18960387 REL JASPAR yes 70824026
chr19 18960377 18960387 NFKB1 JASPAR yes 112761156
chr19 18960377 18960387 RELA JASPAR yes 112761157
chr19 18960377 18960387 REL JASPAR yes 112761158
chr19 18960377 18960388 NFKB1 JASPAR yes 70824027
chr19 18960377 18960388 NFKB1 JASPAR yes 112761159
chr19 18960391 18960405 GATA2 JASPAR yes 70824028
chr19 18960391 18960405 GATA2 JASPAR yes 112761160
chr19 18960403 18960408 H4TF1 TRANSFAC yes 70824029
chr19 18960403 18960408 H4TF1 TRANSFAC yes 112761161
chr19 18960404 18960412 FEV JASPAR yes 70824030
chr19 18960404 18960412 FEV JASPAR yes 112761162
chr19 18960410 18960425 TFAP2C JASPAR yes 70824031
chr19 18960410 18960425 TFAP2C JASPAR yes 112761163
chr19 18960419 18960434 ZIC3 JASPAR yes 70824032
chr19 18960419 18960434 ZIC3 JASPAR yes 112761164
chr19 18960443 18960462 REST JASPAR yes 70824033
chr19 18960443 18960462 REST JASPAR yes 112761165
chr19 18960473 18960478 H4TF1 TRANSFAC yes 70824034
chr19 18960473 18960478 H4TF1 TRANSFAC yes 112761166
SNP sites on vista28947[chr19:18960289-18960480]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28947[chr19:18960289-18960480]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18893583 18902123 - COMP ENSG00000105664.6 18902123 0.83 0.99 17262 41834
chr19 18942747 18979045 + UPF1 ENSG00000005007.8 18942747 0.6 1.0 17263 82458
chr19 18979361 19006905 - GDF1 ENSG00000130283.7 19006905 0.82 0.87 17265 53575
chr19 18979361 19007536 - CERS1 ENSG00000223802.3 19007536 0.87 0.83 17264 52944
chr19 19010323 19030206 - COPE ENSG00000105669.8 19030206 0.75 1.0 17266 30274
chr19 19017822 19045206 - AC002985.3 ENSG00000268193.1 19045206 0.96 0.99 17267 15274
chr19 19030484 19039436 + DDX49 ENSG00000105671.7 19030484 0.64 1.0 17268 29996
chr19 19040010 19052070 - HOMER3 ENSG00000051128.14 19052070 0.79 1.0 17269 8410
Expression level of Genes
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miRNAs possibly regulated by vista28947[chr19:18960289-18960480]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results