EnhancerDB
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  3. vista28949[chr19:19005223-19006062]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28949[chr19:19005223-19006062]
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Tissue distribution of vista28949
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Transcription factor that possibly regulate vista28949[chr19:19005223-19006062]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19005714 19006178 CTCF UCSC Txn Factor no Conserved 108400000
chr19 19005779 19006083 RAD21 UCSC Txn Factor no Conserved 108400004
chr19 19005224 19005230 NFIC JASPAR yes 70824065
chr19 19005257 19005263 SP1 TRANSFAC yes 70824066
chr19 19005267 19005271 YY1 TRANSFAC yes 70824067
chr19 19005274 19005282 EHF JASPAR yes 70824068
chr19 19005305 19005315 SP1 JASPAR yes 70824069
chr19 19005321 19005326 TFAP2A TRANSFAC yes 70824070
chr19 19005321 19005327 MZF1 JASPAR yes 70824071
chr19 19005323 19005329 MAZ TRANSFAC yes 70824072
chr19 19005323 19005334 NFKB1 JASPAR yes 70824073
chr19 19005328 19005341 TFAP2A JASPAR yes 70824074
chr19 19005328 19005341 TFAP2B JASPAR yes 70824075
chr19 19005328 19005341 TFAP2C JASPAR yes 70824076
chr19 19005329 19005338 TFAP2A JASPAR yes 70824077
chr19 19005331 19005340 TFAP2A JASPAR yes 70824078
chr19 19005374 19005378 NFE TRANSFAC yes 70824079
chr19 19005375 19005382 E2F1 TRANSFAC yes 70824080
chr19 19005386 19005391 SP1 TRANSFAC yes 70824081
chr19 19005399 19005418 REST JASPAR yes 70824082
chr19 19005415 19005425 RELA JASPAR yes 70824083
chr19 19005415 19005426 NFKB1 JASPAR yes 70824084
chr19 19005436 19005441 ETS2 TRANSFAC yes 70824085
chr19 19005449 19005453 LFA1 TRANSFAC yes 70824086
chr19 19005461 19005466 GATA2 JASPAR yes 70824087
chr19 19005473 19005485 HINFP JASPAR yes 70824088
chr19 19005475 19005494 REST JASPAR yes 70824089
chr19 19005484 19005490 MAZ TRANSFAC yes 70824090
chr19 19005488 19005493 SP1 TRANSFAC yes 70824091
chr19 19005504 19005508 NFE TRANSFAC yes 70824092
chr19 19005508 19005518 MZF1 JASPAR yes 70824093
chr19 19005511 19005517 SP1 TRANSFAC yes 70824094
chr19 19005511 19005521 SP1 JASPAR yes 70824095
chr19 19005511 19005521 ZNF740 JASPAR yes 70824096
chr19 19005518 19005532 ZIC1 JASPAR yes 70824097
chr19 19005521 19005541 RREB1 JASPAR yes 70824098
chr19 19005523 19005538 RUNX2 JASPAR yes 70824099
chr19 19005531 19005543 INSM1 JASPAR yes 70824100
chr19 19005549 19005559 GCM2 JASPAR yes 70824101
chr19 19005562 19005567 TFAP2A TRANSFAC yes 70824102
chr19 19005562 19005568 MZF1 JASPAR yes 70824103
chr19 19005562 19005583 ZNF263 JASPAR yes 70824104
chr19 19005574 19005579 TFAP2A TRANSFAC yes 70824105
chr19 19005574 19005580 MZF1 JASPAR yes 70824106
chr19 19005580 19005593 SMAD2 JASPAR yes 70824107
chr19 19005583 19005597 TLX1 JASPAR yes 70824108
chr19 19005584 19005597 SMAD2 JASPAR yes 70824109
chr19 19005595 19005612 ZNF410 JASPAR yes 70824110
chr19 19005634 19005653 CTCF JASPAR yes 70824111
chr19 19005654 19005660 LEF1 TRANSFAC yes 70824112
chr19 19005654 19005660 SOX10 JASPAR yes 70824113
chr19 19005661 19005681 ESR1 JASPAR yes 70824114
chr19 19005664 19005673 HIC2 JASPAR yes 70824115
chr19 19005665 19005683 ESR2 JASPAR yes 70824116
chr19 19005667 19005671 LFA1 TRANSFAC yes 70824117
chr19 19005667 19005682 AR JASPAR yes 70824118
chr19 19005697 19005714 ESR1 JASPAR yes 70824119
chr19 19005698 19005708 SP1 JASPAR yes 70824120
chr19 19005698 19005713 ESR2 JASPAR yes 70824121
chr19 19005699 19005704 SP1 TRANSFAC yes 70824122
chr19 19005700 19005705 SP1 TRANSFAC yes 70824123
chr19 19005700 19005706 SP1 TRANSFAC yes 70824124
chr19 19005704 19005723 CTCF JASPAR yes 70824125
chr19 19005709 19005721 TAL1 JASPAR yes 70824126
chr19 19005710 19005722 NHLH1 JASPAR yes 70824127
chr19 19005711 19005721 FIGLA JASPAR yes 70824128
chr19 19005711 19005721 MSC JASPAR yes 70824129
chr19 19005711 19005721 TFAP4 JASPAR yes 70824130
chr19 19005711 19005723 TAL1 JASPAR yes 70824131
chr19 19005718 19005722 H4TF2 TRANSFAC yes 70824132
chr19 19005725 19005736 NFKB1 JASPAR yes 70824133
chr19 19005766 19005785 REST JASPAR yes 70824134
chr19 19005772 19005789 ESR1 JASPAR yes 70824135
chr19 19005785 19005791 SP1 TRANSFAC yes 70824136
chr19 19005785 19005795 SP1 JASPAR yes 70824137
chr19 19005785 19005800 TFAP2C JASPAR yes 70824138
chr19 19005787 19005801 EBF1 JASPAR yes 70824139
chr19 19005788 19005799 EBF1 JASPAR yes 70824140
chr19 19005789 19005795 MZF1 JASPAR yes 70824141
chr19 19005795 19005800 ETS2 TRANSFAC yes 70824142
chr19 19005808 19005812 ESR1 TRANSFAC yes 70824143
chr19 19005810 19005822 E2F1 JASPAR yes 70824144
chr19 19005817 19005821 H1TF2 TRANSFAC yes 70824145
chr19 19005817 19005821 NFE TRANSFAC yes 70824146
chr19 19005817 19005821 SRF TRANSFAC yes 70824147
chr19 19005817 19005828 ESRRA JASPAR yes 70824148
chr19 19005833 19005837 ESR1 TRANSFAC yes 70824149
chr19 19005857 19005876 RFX2 JASPAR yes 70824150
chr19 19005871 19005876 TFAP2A TRANSFAC yes 70824151
chr19 19005871 19005877 MZF1 JASPAR yes 70824152
chr19 19005883 19005887 NFE TRANSFAC yes 70824153
chr19 19005886 19005905 CTCF JASPAR yes 70824154
chr19 19005911 19005926 TFAP2C JASPAR yes 70824155
chr19 19005916 19005931 TFAP2A JASPAR yes 70824156
chr19 19005916 19005931 TFAP2C JASPAR yes 70824157
chr19 19005919 19005930 TFAP2A JASPAR yes 70824158
chr19 19005919 19005931 TFAP2A JASPAR yes 70824159
chr19 19005919 19005931 TFAP2B JASPAR yes 70824160
chr19 19005919 19005931 TFAP2C JASPAR yes 70824161
chr19 19005920 19005929 TFAP2A JASPAR yes 70824162
chr19 19005946 19005958 ZBTB7A JASPAR yes 70824163
chr19 19005947 19005959 ZBTB7C JASPAR yes 70824164
chr19 19005960 19005980 ESR1 JASPAR yes 70824165
chr19 19005964 19005982 ESR2 JASPAR yes 70824166
chr19 19005982 19005988 YY1 JASPAR yes 70824167
chr19 19005990 19006009 CTCF JASPAR yes 70824168
chr19 19005996 19006014 ESR1 JASPAR yes 70824169
chr19 19005997 19006014 ESR1 JASPAR yes 70824170
chr19 19005998 19006013 ESR2 JASPAR yes 70824171
chr19 19006014 19006020 GATA3 JASPAR yes 70824172
chr19 19006036 19006040 LFA1 TRANSFAC yes 70824173
SNP sites on vista28949[chr19:19005223-19006062]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28949[chr19:19005223-19006062]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18942747 18979045 + UPF1 ENSG00000005007.8 18942747 0.6 1.0 17263 37524
chr19 18979361 19006905 - GDF1 ENSG00000130283.7 19006905 0.82 0.87 17265 99157
chr19 18979361 19007536 - CERS1 ENSG00000223802.3 19007536 0.87 0.83 17264 98526
chr19 19010323 19030206 - COPE ENSG00000105669.8 19030206 0.75 1.0 17266 75856
chr19 19017822 19045206 - AC002985.3 ENSG00000268193.1 19045206 0.96 0.99 17267 60856
chr19 19030484 19039436 + DDX49 ENSG00000105671.7 19030484 0.64 1.0 17268 75578
chr19 19040010 19052070 - HOMER3 ENSG00000051128.14 19052070 0.79 1.0 17269 53992
Expression level of Genes
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miRNAs possibly regulated by vista28949[chr19:19005223-19006062]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results