EnhancerDB
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  3. vista28952[chr19:19083211-19083621]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28952[chr19:19083211-19083621]
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Tissue distribution of vista28952
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Transcription factor that possibly regulate vista28952[chr19:19083211-19083621]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19083220 19083229 VENTX JASPAR yes 70824345
chr19 19083220 19083229 VENTX JASPAR yes 112765680
chr19 19083229 19083235 MAZ TRANSFAC yes 70824346
chr19 19083229 19083235 MAZ TRANSFAC yes 112765681
chr19 19083231 19083247 SOX4 JASPAR yes 70824347
chr19 19083231 19083247 SOX4 JASPAR yes 112765682
chr19 19083245 19083255 HOXB13 JASPAR yes 70824348
chr19 19083245 19083255 HOXB13 JASPAR yes 112765683
chr19 19083246 19083258 FOXI1 JASPAR yes 70824349
chr19 19083246 19083258 FOXI1 JASPAR yes 112765684
chr19 19083247 19083259 FOXC2 JASPAR yes 70824350
chr19 19083247 19083259 FOXC2 JASPAR yes 112765685
chr19 19083249 19083253 YY1 TRANSFAC yes 70824351
chr19 19083249 19083253 YY1 TRANSFAC yes 112765686
chr19 19083249 19083270 IRF1 JASPAR yes 70824352
chr19 19083249 19083270 IRF1 JASPAR yes 112765687
chr19 19083250 19083265 FOXP1 JASPAR yes 70824353
chr19 19083250 19083265 FOXP1 JASPAR yes 112765688
chr19 19083250 19083271 IRF1 JASPAR yes 70824354
chr19 19083250 19083271 IRF1 JASPAR yes 112765689
chr19 19083251 19083260 SRY JASPAR yes 70824355
chr19 19083251 19083260 SRY JASPAR yes 112765690
chr19 19083251 19083262 FOXP2 JASPAR yes 70824356
chr19 19083251 19083262 FOXP2 JASPAR yes 112765691
chr19 19083251 19083263 FOXC2 JASPAR yes 70824357
chr19 19083251 19083263 FOXC2 JASPAR yes 112765692
chr19 19083251 19083266 STAT2 JASPAR yes 70824358
chr19 19083251 19083266 STAT2 JASPAR yes 112765693
chr19 19083252 19083263 FOXC1 JASPAR yes 70824359
chr19 19083252 19083263 FOXC1 JASPAR yes 112765694
chr19 19083252 19083266 STAT1 JASPAR yes 70824360
chr19 19083252 19083266 STAT1 JASPAR yes 112765695
chr19 19083253 19083264 FOXA1 JASPAR yes 70824361
chr19 19083253 19083264 FOXA1 JASPAR yes 112765696
chr19 19083270 19083276 LEF1 TRANSFAC yes 70824362
chr19 19083270 19083276 SOX10 JASPAR yes 70824363
chr19 19083270 19083276 LEF1 TRANSFAC yes 112765697
chr19 19083270 19083276 SOX10 JASPAR yes 112765698
chr19 19083282 19083293 ELF5 JASPAR yes 70824364
chr19 19083282 19083293 ELF5 JASPAR yes 112765699
chr19 19083284 19083292 FEV JASPAR yes 70824365
chr19 19083284 19083292 FEV JASPAR yes 112765700
chr19 19083291 19083305 RORA JASPAR yes 70824366
chr19 19083291 19083305 RORA JASPAR yes 112765701
chr19 19083299 19083303 YY1 TRANSFAC yes 70824367
chr19 19083299 19083303 YY1 TRANSFAC yes 112765702
chr19 19083304 19083314 HOXB13 JASPAR yes 70824368
chr19 19083304 19083314 HOXD13 JASPAR yes 70824369
chr19 19083304 19083314 HOXB13 JASPAR yes 112765703
chr19 19083304 19083314 HOXD13 JASPAR yes 112765704
chr19 19083305 19083315 ALX3 JASPAR yes 70824370
chr19 19083305 19083315 EMX2 JASPAR yes 70824371
chr19 19083305 19083315 ESX1 JASPAR yes 70824372
chr19 19083305 19083315 GSX1 JASPAR yes 70824373
chr19 19083305 19083315 GSX2 JASPAR yes 70824374
chr19 19083305 19083315 HOXA2 JASPAR yes 70824375
chr19 19083305 19083315 HOXB2 JASPAR yes 70824376
chr19 19083305 19083315 HOXB3 JASPAR yes 70824377
chr19 19083305 19083315 LBX2 JASPAR yes 70824378
chr19 19083305 19083315 LHX2 JASPAR yes 70824379
chr19 19083305 19083315 LHX6 JASPAR yes 70824380
chr19 19083305 19083315 MEOX1 JASPAR yes 70824381
chr19 19083305 19083315 MEOX2 JASPAR yes 70824382
chr19 19083305 19083315 MIXL1 JASPAR yes 70824383
chr19 19083305 19083315 NOTO JASPAR yes 70824384
chr19 19083305 19083315 ALX3 JASPAR yes 112765705
chr19 19083305 19083315 EMX2 JASPAR yes 112765706
chr19 19083305 19083315 ESX1 JASPAR yes 112765707
chr19 19083305 19083315 GSX1 JASPAR yes 112765708
chr19 19083305 19083315 GSX2 JASPAR yes 112765709
chr19 19083305 19083315 HOXA2 JASPAR yes 112765710
chr19 19083305 19083315 HOXB2 JASPAR yes 112765711
chr19 19083305 19083315 HOXB3 JASPAR yes 112765712
chr19 19083305 19083315 LBX2 JASPAR yes 112765713
chr19 19083305 19083315 LHX2 JASPAR yes 112765714
chr19 19083305 19083315 LHX6 JASPAR yes 112765715
chr19 19083305 19083315 MEOX1 JASPAR yes 112765716
chr19 19083305 19083315 MEOX2 JASPAR yes 112765717
chr19 19083305 19083315 MIXL1 JASPAR yes 112765718
chr19 19083305 19083315 NOTO JASPAR yes 112765719
chr19 19083306 19083314 BSX JASPAR yes 70824385
chr19 19083306 19083314 DLX6 JASPAR yes 70824386
chr19 19083306 19083314 EN1 JASPAR yes 70824387
chr19 19083306 19083314 ISX JASPAR yes 70824388
chr19 19083306 19083314 LBX1 JASPAR yes 70824389
chr19 19083306 19083314 LHX9 JASPAR yes 70824390
chr19 19083306 19083314 LMX1A JASPAR yes 70824391
chr19 19083306 19083314 LMX1B JASPAR yes 70824392
chr19 19083306 19083314 NKX6-1 JASPAR yes 70824393
chr19 19083306 19083314 NKX6-2 JASPAR yes 70824394
chr19 19083306 19083314 PAX4 JASPAR yes 70824395
chr19 19083306 19083314 PDX1 JASPAR yes 70824396
chr19 19083306 19083314 PRRX1 JASPAR yes 70824397
chr19 19083306 19083314 RAX2 JASPAR yes 70824398
chr19 19083306 19083314 SHOX JASPAR yes 70824399
chr19 19083306 19083314 UNCX JASPAR yes 70824400
chr19 19083306 19083314 VAX1 JASPAR yes 70824401
chr19 19083306 19083314 VAX2 JASPAR yes 70824402
chr19 19083306 19083314 VSX1 JASPAR yes 70824403
chr19 19083306 19083314 VSX2 JASPAR yes 70824404
chr19 19083306 19083314 BSX JASPAR yes 112765720
chr19 19083306 19083314 DLX6 JASPAR yes 112765721
chr19 19083306 19083314 EN1 JASPAR yes 112765722
chr19 19083306 19083314 ISX JASPAR yes 112765723
chr19 19083306 19083314 LBX1 JASPAR yes 112765724
chr19 19083306 19083314 LHX9 JASPAR yes 112765725
chr19 19083306 19083314 LMX1A JASPAR yes 112765726
chr19 19083306 19083314 LMX1B JASPAR yes 112765727
chr19 19083306 19083314 NKX6-1 JASPAR yes 112765728
chr19 19083306 19083314 NKX6-2 JASPAR yes 112765729
chr19 19083306 19083314 PAX4 JASPAR yes 112765730
chr19 19083306 19083314 PDX1 JASPAR yes 112765731
chr19 19083306 19083314 PRRX1 JASPAR yes 112765732
chr19 19083306 19083314 RAX2 JASPAR yes 112765733
chr19 19083306 19083314 SHOX JASPAR yes 112765734
chr19 19083306 19083314 UNCX JASPAR yes 112765735
chr19 19083306 19083314 VAX1 JASPAR yes 112765736
chr19 19083306 19083314 VAX2 JASPAR yes 112765737
chr19 19083306 19083314 VSX1 JASPAR yes 112765738
chr19 19083306 19083314 VSX2 JASPAR yes 112765739
chr19 19083306 19083316 POU6F2 JASPAR yes 70824405
chr19 19083306 19083316 POU6F2 JASPAR yes 112765740
chr19 19083310 19083320 MZF1 JASPAR yes 70824406
chr19 19083310 19083320 MZF1 JASPAR yes 112765741
chr19 19083344 19083350 NFIC JASPAR yes 70824407
chr19 19083344 19083350 NFIC JASPAR yes 112765742
chr19 19083366 19083386 PPARG JASPAR yes 70824408
chr19 19083366 19083386 PPARG JASPAR yes 112765743
chr19 19083375 19083380 SP1 TRANSFAC yes 70824409
chr19 19083375 19083380 SP1 TRANSFAC yes 112765744
chr19 19083379 19083399 ESR1 JASPAR yes 70824410
chr19 19083379 19083399 ESR1 JASPAR yes 112765745
chr19 19083405 19083409 LFA1 TRANSFAC yes 70824411
chr19 19083405 19083409 LFA1 TRANSFAC yes 112765746
chr19 19083418 19083422 ESR1 TRANSFAC yes 70824412
chr19 19083418 19083422 ESR1 TRANSFAC yes 112765747
chr19 19083447 19083458 NFKB1 JASPAR yes 70824413
chr19 19083447 19083458 NFKB1 JASPAR yes 112765748
chr19 19083448 19083458 NFKB1 JASPAR yes 70824414
chr19 19083448 19083458 NFKB1 JASPAR yes 112765749
chr19 19083448 19083459 NFKB1 JASPAR yes 70824415
chr19 19083448 19083459 NFKB1 JASPAR yes 112765750
chr19 19083473 19083477 YY1 TRANSFAC yes 70824416
chr19 19083473 19083477 YY1 TRANSFAC yes 112765751
chr19 19083474 19083482 FEV JASPAR yes 70824417
chr19 19083474 19083482 FEV JASPAR yes 112765752
chr19 19083496 19083517 IRF1 JASPAR yes 70824418
chr19 19083496 19083517 IRF1 JASPAR yes 112765753
chr19 19083497 19083518 IRF1 JASPAR yes 70824419
chr19 19083497 19083518 IRF1 JASPAR yes 112765754
chr19 19083500 19083521 IRF1 JASPAR yes 70824420
chr19 19083500 19083521 IRF1 JASPAR yes 112765755
chr19 19083501 19083516 FOXP1 JASPAR yes 70824421
chr19 19083501 19083516 FOXP1 JASPAR yes 112765756
chr19 19083501 19083522 IRF1 JASPAR yes 70824422
chr19 19083501 19083522 IRF1 JASPAR yes 112765757
chr19 19083502 19083517 FOXP1 JASPAR yes 70824423
chr19 19083502 19083517 FOXP1 JASPAR yes 112765758
chr19 19083502 19083523 IRF1 JASPAR yes 70824424
chr19 19083502 19083523 IRF1 JASPAR yes 112765759
chr19 19083503 19083518 FOXP1 JASPAR yes 70824425
chr19 19083503 19083518 FOXP1 JASPAR yes 112765760
chr19 19083503 19083524 IRF1 JASPAR yes 70824426
chr19 19083503 19083524 IRF1 JASPAR yes 112765761
chr19 19083504 19083519 FOXP1 JASPAR yes 70824427
chr19 19083504 19083519 FOXP1 JASPAR yes 112765762
chr19 19083504 19083525 IRF1 JASPAR yes 70824428
chr19 19083504 19083525 IRF1 JASPAR yes 112765763
chr19 19083505 19083520 FOXP1 JASPAR yes 70824429
chr19 19083505 19083520 FOXP1 JASPAR yes 112765764
chr19 19083505 19083526 IRF1 JASPAR yes 70824430
chr19 19083505 19083526 IRF1 JASPAR yes 112765765
chr19 19083506 19083521 FOXP1 JASPAR yes 70824431
chr19 19083506 19083521 FOXP1 JASPAR yes 112765766
chr19 19083507 19083522 FOXP1 JASPAR yes 70824432
chr19 19083507 19083522 FOXP1 JASPAR yes 112765767
chr19 19083508 19083523 FOXP1 JASPAR yes 70824433
chr19 19083508 19083523 FOXP1 JASPAR yes 112765768
chr19 19083509 19083524 FOXP1 JASPAR yes 70824434
chr19 19083509 19083524 FOXP1 JASPAR yes 112765769
chr19 19083510 19083525 FOXP1 JASPAR yes 70824435
chr19 19083510 19083525 FOXP1 JASPAR yes 112765770
chr19 19083511 19083526 FOXP1 JASPAR yes 70824436
chr19 19083511 19083526 FOXP1 JASPAR yes 112765771
chr19 19083512 19083527 FOXP1 JASPAR yes 70824437
chr19 19083512 19083527 FOXP1 JASPAR yes 112765772
chr19 19083515 19083530 MEF2C JASPAR yes 70824438
chr19 19083515 19083530 MEF2C JASPAR yes 112765773
chr19 19083526 19083537 ETV2 JASPAR yes 70824439
chr19 19083526 19083537 ETV2 JASPAR yes 112765774
chr19 19083527 19083537 ERF JASPAR yes 70824440
chr19 19083527 19083537 ERG JASPAR yes 70824441
chr19 19083527 19083537 ETS1 JASPAR yes 70824442
chr19 19083527 19083537 FLI1 JASPAR yes 70824443
chr19 19083527 19083537 ERF JASPAR yes 112765775
chr19 19083527 19083537 ERG JASPAR yes 112765776
chr19 19083527 19083537 ETS1 JASPAR yes 112765777
chr19 19083527 19083537 FLI1 JASPAR yes 112765778
chr19 19083528 19083536 FEV JASPAR yes 70824444
chr19 19083528 19083536 FEV JASPAR yes 112765779
chr19 19083540 19083544 NFE TRANSFAC yes 70824445
chr19 19083540 19083544 NFE TRANSFAC yes 112765780
chr19 19083558 19083573 JUND JASPAR yes 70824446
chr19 19083558 19083573 JUND JASPAR yes 112765781
chr19 19083611 19083632 ZNF263 JASPAR yes 70824447
chr19 19083611 19083632 ZNF263 JASPAR yes 112765782
SNP sites on vista28952[chr19:19083211-19083621]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28952[chr19:19083211-19083621]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 18979361 19006905 - GDF1 ENSG00000130283.7 19006905 0.82 0.87 17265 23694
chr19 18979361 19007536 - CERS1 ENSG00000223802.3 19007536 0.87 0.83 17264 24325
chr19 19010323 19030206 - COPE ENSG00000105669.8 19030206 0.75 1.0 17266 46995
chr19 19017822 19045206 - AC002985.3 ENSG00000268193.1 19045206 0.96 0.99 17267 61995
chr19 19030484 19039436 + DDX49 ENSG00000105671.7 19030484 0.64 1.0 17268 47273
chr19 19040010 19052070 - HOMER3 ENSG00000051128.14 19052070 0.79 1.0 17269 68859
chr19 19101697 19144832 - SUGP2 ENSG00000064607.12 19144832 0.65 1.0 17270 38789
chr19 19144384 19170563 + ARMC6 ENSG00000105676.9 19144384 0.72 0.99 17271 39237
chr19 19174808 19223697 + SLC25A42 ENSG00000181035.9 19174808 0.85 1.0 17272 8813
Expression level of Genes
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miRNAs possibly regulated by vista28952[chr19:19083211-19083621]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results