EnhancerDB
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  3. vista28962[chr19:19488658-19488936]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28962[chr19:19488658-19488936]
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Tissue distribution of vista28962
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Transcription factor that possibly regulate vista28962[chr19:19488658-19488936]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19488562 19489032 GATA3 UCSC Txn Factor no Conserved 108400468
chr19 19488613 19488968 STAT1 UCSC Txn Factor no Conserved 108400472
chr19 19488643 19488658 ZIC3 JASPAR yes 70824758
chr19 19488643 19488658 ZIC4 JASPAR yes 70824759
chr19 19488643 19488658 ZIC3 JASPAR yes 112778949
chr19 19488643 19488658 ZIC4 JASPAR yes 112778950
chr19 19488644 19488658 ZIC1 JASPAR yes 70824760
chr19 19488644 19488658 ZIC1 JASPAR yes 112778951
chr19 19488661 19488674 SMAD2 JASPAR yes 70824761
chr19 19488661 19488674 SMAD2 JASPAR yes 112778952
chr19 19488705 19488714 SP1 TRANSFAC yes 70824762
chr19 19488705 19488714 SP1 TRANSFAC yes 112778953
chr19 19488706 19488714 SP1 TRANSFAC yes 70824763
chr19 19488706 19488714 SP1 TRANSFAC yes 112778954
chr19 19488706 19488716 SP1 JASPAR yes 70824764
chr19 19488706 19488716 SP1 JASPAR yes 112778955
chr19 19488749 19488753 YY1 TRANSFAC yes 70824765
chr19 19488749 19488753 YY1 TRANSFAC yes 112778956
chr19 19488751 19488769 SRF JASPAR yes 70824766
chr19 19488751 19488769 SRF JASPAR yes 112778957
chr19 19488757 19488761 YY1 TRANSFAC yes 70824767
chr19 19488757 19488761 YY1 TRANSFAC yes 112778958
chr19 19488771 19488785 TLX1 JASPAR yes 70824768
chr19 19488771 19488785 TLX1 JASPAR yes 112778959
chr19 19488786 19488795 THAP1 JASPAR yes 70824769
chr19 19488786 19488795 THAP1 JASPAR yes 112778960
chr19 19488796 19488801 H4TF1 TRANSFAC yes 70824770
chr19 19488796 19488801 H4TF1 TRANSFAC yes 112778961
chr19 19488798 19488809 STAT1 JASPAR yes 70824771
chr19 19488798 19488809 STAT1 JASPAR yes 112778962
chr19 19488805 19488818 ELF1 JASPAR yes 70824772
chr19 19488805 19488818 ELF1 JASPAR yes 112778963
chr19 19488808 19488815 ETS1 TRANSFAC yes 70824773
chr19 19488808 19488815 ETS1 TRANSFAC yes 112778964
chr19 19488809 19488817 EHF JASPAR yes 70824774
chr19 19488809 19488817 EHF JASPAR yes 112778965
chr19 19488810 19488824 STAT1 JASPAR yes 70824775
chr19 19488810 19488824 STAT1 JASPAR yes 112778966
chr19 19488833 19488846 DUXA JASPAR yes 70824776
chr19 19488833 19488846 DUXA JASPAR yes 112778967
chr19 19488834 19488845 DUX4 JASPAR yes 70824777
chr19 19488834 19488845 DUX4 JASPAR yes 112778968
chr19 19488847 19488859 GLI2 JASPAR yes 70824778
chr19 19488847 19488859 ZBTB7B JASPAR yes 70824779
chr19 19488847 19488859 ZBTB7C JASPAR yes 70824780
chr19 19488847 19488859 GLI2 JASPAR yes 112778969
chr19 19488847 19488859 ZBTB7B JASPAR yes 112778970
chr19 19488847 19488859 ZBTB7C JASPAR yes 112778971
chr19 19488856 19488861 ETS2 TRANSFAC yes 70824781
chr19 19488856 19488861 ETS2 TRANSFAC yes 112778972
chr19 19488885 19488889 NFE TRANSFAC yes 70824782
chr19 19488885 19488889 NFE TRANSFAC yes 112778973
chr19 19488885 19488899 CREB3L1 JASPAR yes 70824783
chr19 19488885 19488899 CREB3L1 JASPAR yes 112778974
chr19 19488886 19488896 MAX JASPAR yes 70824784
chr19 19488886 19488896 MAX JASPAR yes 112778975
chr19 19488886 19488897 USF1 JASPAR yes 70824785
chr19 19488886 19488897 USF2 JASPAR yes 70824786
chr19 19488886 19488897 USF1 JASPAR yes 112778976
chr19 19488886 19488897 USF2 JASPAR yes 112778977
chr19 19488887 19488897 BHLHE40 JASPAR yes 70824787
chr19 19488887 19488897 BHLHE41 JASPAR yes 70824788
chr19 19488887 19488897 MAX JASPAR yes 70824789
chr19 19488887 19488897 MLXIPL JASPAR yes 70824790
chr19 19488887 19488897 MLX JASPAR yes 70824791
chr19 19488887 19488897 MNT JASPAR yes 70824792
chr19 19488887 19488897 SREBF2 JASPAR yes 70824793
chr19 19488887 19488897 TFE3 JASPAR yes 70824794
chr19 19488887 19488897 TFEB JASPAR yes 70824795
chr19 19488887 19488897 TFEC JASPAR yes 70824796
chr19 19488887 19488897 BHLHE40 JASPAR yes 112778978
chr19 19488887 19488897 BHLHE41 JASPAR yes 112778979
chr19 19488887 19488897 MAX JASPAR yes 112778980
chr19 19488887 19488897 MLXIPL JASPAR yes 112778981
chr19 19488887 19488897 MLX JASPAR yes 112778982
chr19 19488887 19488897 MNT JASPAR yes 112778983
chr19 19488887 19488897 SREBF2 JASPAR yes 112778984
chr19 19488887 19488897 TFE3 JASPAR yes 112778985
chr19 19488887 19488897 TFEB JASPAR yes 112778986
chr19 19488887 19488897 TFEC JASPAR yes 112778987
chr19 19488887 19488898 USF2 JASPAR yes 70824797
chr19 19488887 19488898 USF2 JASPAR yes 112778988
chr19 19488888 19488898 MAX JASPAR yes 70824798
chr19 19488888 19488898 MAX JASPAR yes 112778989
chr19 19488889 19488894 MYC TRANSFAC yes 70824799
chr19 19488889 19488894 USF1 TRANSFAC yes 70824800
chr19 19488889 19488894 USF2 TRANSFAC yes 70824801
chr19 19488889 19488894 MYC TRANSFAC yes 112778990
chr19 19488889 19488894 USF1 TRANSFAC yes 112778991
chr19 19488889 19488894 USF2 TRANSFAC yes 112778992
chr19 19488889 19488896 USF1 JASPAR yes 70824802
chr19 19488889 19488896 USF1 JASPAR yes 112778993
chr19 19488894 19488908 IRF8 JASPAR yes 70824803
chr19 19488894 19488908 IRF8 JASPAR yes 112778994
chr19 19488894 19488909 IRF9 JASPAR yes 70824804
chr19 19488894 19488909 IRF9 JASPAR yes 112778995
chr19 19488895 19488900 GATA1 TRANSFAC yes 70824805
chr19 19488895 19488900 GATA1 TRANSFAC yes 112778996
chr19 19488897 19488912 LEF1 JASPAR yes 70824806
chr19 19488897 19488912 LEF1 JASPAR yes 112778997
chr19 19488898 19488912 TCF7L2 JASPAR yes 70824807
chr19 19488898 19488912 TCF7L2 JASPAR yes 112778998
chr19 19488901 19488922 IRF1 JASPAR yes 70824808
chr19 19488901 19488922 IRF1 JASPAR yes 112778999
chr19 19488903 19488924 IRF1 JASPAR yes 70824809
chr19 19488903 19488924 IRF1 JASPAR yes 112779000
chr19 19488907 19488928 IRF1 JASPAR yes 70824810
chr19 19488907 19488928 IRF1 JASPAR yes 112779001
chr19 19488909 19488924 PRDM1 JASPAR yes 70824811
chr19 19488909 19488924 STAT2 JASPAR yes 70824812
chr19 19488909 19488924 PRDM1 JASPAR yes 112779002
chr19 19488909 19488924 STAT2 JASPAR yes 112779003
chr19 19488910 19488924 SPIC JASPAR yes 70824813
chr19 19488910 19488924 STAT1 JASPAR yes 70824814
chr19 19488910 19488924 SPIC JASPAR yes 112779004
chr19 19488910 19488924 STAT1 JASPAR yes 112779005
chr19 19488911 19488932 IRF1 JASPAR yes 70824815
chr19 19488911 19488932 IRF1 JASPAR yes 112779006
chr19 19488912 19488927 FOXP1 JASPAR yes 70824816
chr19 19488912 19488927 FOXP1 JASPAR yes 112779007
chr19 19488913 19488933 RREB1 JASPAR yes 70824817
chr19 19488913 19488933 RREB1 JASPAR yes 112779008
chr19 19488914 19488929 FOXP1 JASPAR yes 70824818
chr19 19488914 19488929 FOXP1 JASPAR yes 112779009
chr19 19488916 19488931 FOXP1 JASPAR yes 70824819
chr19 19488916 19488931 FOXP1 JASPAR yes 112779010
chr19 19488917 19488932 FOXP1 JASPAR yes 70824820
chr19 19488917 19488932 FOXP1 JASPAR yes 112779011
chr19 19488918 19488933 FOXP1 JASPAR yes 70824821
chr19 19488918 19488933 FOXP1 JASPAR yes 112779012
chr19 19488921 19488941 RREB1 JASPAR yes 70824822
chr19 19488921 19488941 RREB1 JASPAR yes 112779013
chr19 19488925 19488931 TCF4 TRANSFAC yes 70824823
chr19 19488925 19488931 TCF4 TRANSFAC yes 112779014
SNP sites on vista28962[chr19:19488658-19488936]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28962[chr19:19488658-19488936]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 19386827 19431653 - SUGP1 ENSG00000105705.11 19431653 0.66 1.0 17282 42995
chr19 19431490 19469563 + MAU2 ENSG00000129933.16 19431490 0.66 1.0 17283 42832
chr19 19496635 19619740 + GATAD2A ENSG00000167491.13 19496635 0.69 1.0 17284 92301
Expression level of Genes
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miRNAs possibly regulated by vista28962[chr19:19488658-19488936]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results