EnhancerDB
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  3. vista28965[chr19:19560401-19560757]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28965[chr19:19560401-19560757]
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Tissue distribution of vista28965
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Transcription factor that possibly regulate vista28965[chr19:19560401-19560757]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19560395 19560406 DMRT3 JASPAR yes 70824931
chr19 19560395 19560406 DMRT3 JASPAR yes 112786026
chr19 19560400 19560415 FOXP1 JASPAR yes 70824932
chr19 19560400 19560415 FOXP1 JASPAR yes 112786027
chr19 19560401 19560416 FOXP1 JASPAR yes 70824933
chr19 19560401 19560416 FOXP1 JASPAR yes 112786028
chr19 19560402 19560417 FOXP1 JASPAR yes 70824934
chr19 19560402 19560417 FOXP1 JASPAR yes 112786029
chr19 19560403 19560418 FOXP1 JASPAR yes 70824935
chr19 19560403 19560418 FOXP1 JASPAR yes 112786030
chr19 19560404 19560419 FOXP1 JASPAR yes 70824936
chr19 19560404 19560419 FOXP1 JASPAR yes 112786031
chr19 19560405 19560420 FOXP1 JASPAR yes 70824937
chr19 19560405 19560420 FOXP1 JASPAR yes 112786032
chr19 19560405 19560426 IRF1 JASPAR yes 70824938
chr19 19560405 19560426 IRF1 JASPAR yes 112786033
chr19 19560406 19560421 FOXP1 JASPAR yes 70824939
chr19 19560406 19560421 FOXP1 JASPAR yes 112786034
chr19 19560406 19560427 IRF1 JASPAR yes 70824940
chr19 19560406 19560427 IRF1 JASPAR yes 112786035
chr19 19560407 19560422 FOXP1 JASPAR yes 70824941
chr19 19560407 19560422 FOXP1 JASPAR yes 112786036
chr19 19560429 19560433 LFA1 TRANSFAC yes 70824942
chr19 19560429 19560433 LFA1 TRANSFAC yes 112786037
chr19 19560432 19560444 YY1 JASPAR yes 70824943
chr19 19560432 19560444 YY1 JASPAR yes 112786038
chr19 19560448 19560452 NFE TRANSFAC yes 70824944
chr19 19560448 19560452 NFE TRANSFAC yes 112786039
chr19 19560479 19560488 HIC2 JASPAR yes 70824945
chr19 19560479 19560488 HIC2 JASPAR yes 112786040
chr19 19560481 19560490 ZEB1 JASPAR yes 70824946
chr19 19560481 19560490 ZEB1 JASPAR yes 112786041
chr19 19560481 19560496 SCRT1 JASPAR yes 70824947
chr19 19560481 19560496 SCRT1 JASPAR yes 112786042
chr19 19560482 19560492 FIGLA JASPAR yes 70824948
chr19 19560482 19560492 TCF3 JASPAR yes 70824949
chr19 19560482 19560492 TCF4 JASPAR yes 70824950
chr19 19560482 19560492 FIGLA JASPAR yes 112786043
chr19 19560482 19560492 TCF3 JASPAR yes 112786044
chr19 19560482 19560492 TCF4 JASPAR yes 112786045
chr19 19560483 19560492 SNAI2 JASPAR yes 70824951
chr19 19560483 19560492 SNAI2 JASPAR yes 112786046
chr19 19560483 19560497 RXRB JASPAR yes 70824952
chr19 19560483 19560497 RXRG JASPAR yes 70824953
chr19 19560483 19560497 RXRB JASPAR yes 112786047
chr19 19560483 19560497 RXRG JASPAR yes 112786048
chr19 19560484 19560489 USF2 TRANSFAC yes 70824954
chr19 19560484 19560489 USF2 TRANSFAC yes 112786049
chr19 19560486 19560499 NR2F1 JASPAR yes 70824955
chr19 19560486 19560499 NR2F1 JASPAR yes 112786050
chr19 19560487 19560506 CTCF JASPAR yes 70824956
chr19 19560487 19560506 CTCF JASPAR yes 112786051
chr19 19560488 19560499 ESRRA JASPAR yes 70824957
chr19 19560488 19560499 ESRRA JASPAR yes 112786052
chr19 19560489 19560497 NR4A2 JASPAR yes 70824958
chr19 19560489 19560497 NR4A2 JASPAR yes 112786053
chr19 19560506 19560514 TBX15 JASPAR yes 70824959
chr19 19560506 19560514 TBX15 JASPAR yes 112786054
chr19 19560506 19560517 E2F6 JASPAR yes 70824960
chr19 19560506 19560517 E2F6 JASPAR yes 112786055
chr19 19560507 19560512 SP1 TRANSFAC yes 70824961
chr19 19560507 19560512 SP1 TRANSFAC yes 112786056
chr19 19560515 19560528 ATF4 JASPAR yes 70824962
chr19 19560515 19560528 ATF4 JASPAR yes 112786057
chr19 19560597 19560601 NFE TRANSFAC yes 70824963
chr19 19560597 19560601 NFE TRANSFAC yes 112786058
chr19 19560602 19560608 TBP TRANSFAC yes 70824964
chr19 19560602 19560608 TBP TRANSFAC yes 112786059
chr19 19560614 19560628 ONECUT1 JASPAR yes 70824965
chr19 19560614 19560628 ONECUT2 JASPAR yes 70824966
chr19 19560614 19560628 ONECUT3 JASPAR yes 70824967
chr19 19560614 19560628 ONECUT1 JASPAR yes 112786060
chr19 19560614 19560628 ONECUT2 JASPAR yes 112786061
chr19 19560614 19560628 ONECUT3 JASPAR yes 112786062
chr19 19560615 19560625 PAX3 JASPAR yes 70824968
chr19 19560615 19560625 PAX7 JASPAR yes 70824969
chr19 19560615 19560625 PAX3 JASPAR yes 112786063
chr19 19560615 19560625 PAX7 JASPAR yes 112786064
chr19 19560625 19560631 TBP TRANSFAC yes 70824970
chr19 19560625 19560631 TBP TRANSFAC yes 112786065
chr19 19560632 19560636 YY1 TRANSFAC yes 70824971
chr19 19560632 19560636 YY1 TRANSFAC yes 112786066
chr19 19560646 19560650 YY1 TRANSFAC yes 70824972
chr19 19560646 19560650 YY1 TRANSFAC yes 112786067
chr19 19560667 19560673 HiNF-A TRANSFAC yes 70824973
chr19 19560667 19560673 HiNF-A TRANSFAC yes 112786068
chr19 19560668 19560678 TFEC JASPAR yes 70824974
chr19 19560668 19560678 TFEC JASPAR yes 112786069
chr19 19560668 19560684 SOX8 JASPAR yes 70824975
chr19 19560668 19560684 SOX8 JASPAR yes 112786070
chr19 19560688 19560692 YY1 TRANSFAC yes 70824976
chr19 19560688 19560692 YY1 TRANSFAC yes 112786071
chr19 19560692 19560696 YY1 TRANSFAC yes 70824977
chr19 19560692 19560696 YY1 TRANSFAC yes 112786072
chr19 19560704 19560714 RELA JASPAR yes 70824978
chr19 19560704 19560714 RELA JASPAR yes 112786073
chr19 19560707 19560720 ZBTB18 JASPAR yes 70824979
chr19 19560707 19560720 ZBTB18 JASPAR yes 112786074
chr19 19560715 19560736 IRF1 JASPAR yes 70824980
chr19 19560715 19560736 IRF1 JASPAR yes 112786075
chr19 19560719 19560740 ZNF263 JASPAR yes 70824981
chr19 19560719 19560740 ZNF263 JASPAR yes 112786076
chr19 19560721 19560742 IRF1 JASPAR yes 70824982
chr19 19560721 19560742 IRF1 JASPAR yes 112786077
chr19 19560723 19560738 FOXP1 JASPAR yes 70824983
chr19 19560723 19560738 FOXP1 JASPAR yes 112786078
chr19 19560729 19560740 FLI1 JASPAR yes 70824984
chr19 19560729 19560740 FLI1 JASPAR yes 112786079
chr19 19560729 19560742 ELF3 JASPAR yes 70824985
chr19 19560729 19560742 ELF3 JASPAR yes 112786080
chr19 19560730 19560743 ELF1 JASPAR yes 70824986
chr19 19560730 19560743 ELF1 JASPAR yes 112786081
chr19 19560731 19560738 SPI1 JASPAR yes 70824987
chr19 19560731 19560738 SPI1 JASPAR yes 112786082
chr19 19560731 19560739 FEV JASPAR yes 70824988
chr19 19560731 19560739 FEV JASPAR yes 112786083
chr19 19560733 19560738 ETS2 TRANSFAC yes 70824989
chr19 19560733 19560738 ETS2 TRANSFAC yes 112786084
chr19 19560738 19560747 SOX9 JASPAR yes 70824990
chr19 19560738 19560747 SOX9 JASPAR yes 112786085
chr19 19560740 19560749 SRY JASPAR yes 70824991
chr19 19560740 19560749 SRY JASPAR yes 112786086
chr19 19560743 19560758 FOXA1 JASPAR yes 70824992
chr19 19560743 19560758 FOXA1 JASPAR yes 112786087
chr19 19560744 19560756 FOXI1 JASPAR yes 70824993
chr19 19560744 19560756 FOXI1 JASPAR yes 112786088
chr19 19560744 19560758 POU4F1 JASPAR yes 70824994
chr19 19560744 19560758 POU4F1 JASPAR yes 112786089
chr19 19560744 19560759 FOXP1 JASPAR yes 70824995
chr19 19560744 19560759 HNF1A JASPAR yes 70824996
chr19 19560744 19560759 FOXP1 JASPAR yes 112786090
chr19 19560744 19560759 HNF1A JASPAR yes 112786091
chr19 19560745 19560757 FOXC2 JASPAR yes 70824997
chr19 19560745 19560757 FOXC2 JASPAR yes 112786092
chr19 19560745 19560759 FOXF2 JASPAR yes 70824998
chr19 19560745 19560759 ONECUT3 JASPAR yes 70824999
chr19 19560745 19560759 FOXF2 JASPAR yes 112786093
chr19 19560745 19560759 ONECUT3 JASPAR yes 112786094
chr19 19560746 19560757 FOXB1 JASPAR yes 70825000
chr19 19560746 19560757 FOXC1 JASPAR yes 70825001
chr19 19560746 19560757 PROP1 JASPAR yes 70825002
chr19 19560746 19560757 FOXB1 JASPAR yes 112786095
chr19 19560746 19560757 FOXC1 JASPAR yes 112786096
chr19 19560746 19560757 PROP1 JASPAR yes 112786097
chr19 19560747 19560751 YY1 TRANSFAC yes 70825003
chr19 19560747 19560751 YY1 TRANSFAC yes 112786098
chr19 19560748 19560763 FOXP1 JASPAR yes 70825004
chr19 19560748 19560763 FOXP1 JASPAR yes 112786099
chr19 19560749 19560761 FOXC2 JASPAR yes 70825005
chr19 19560749 19560761 FOXC2 JASPAR yes 112786100
chr19 19560749 19560763 FOXF2 JASPAR yes 70825006
chr19 19560749 19560763 FOXF2 JASPAR yes 112786101
chr19 19560750 19560761 FOXC1 JASPAR yes 70825007
chr19 19560750 19560761 FOXC1 JASPAR yes 112786102
chr19 19560751 19560755 YY1 TRANSFAC yes 70825008
chr19 19560751 19560755 YY1 TRANSFAC yes 112786103
SNP sites on vista28965[chr19:19560401-19560757]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28965[chr19:19560401-19560757]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 19496635 19619740 + GATAD2A ENSG00000167491.13 19496635 0.69 1.0 17284 36234
chr19 19623227 19626838 - TSSK6 ENSG00000178093.12 19626838 0.86 1.0 17285 33919
chr19 19626545 19644285 + NDUFA13 ENSG00000186010.14 19626545 0.7 0.86 17286 34212
chr19 19627036 19646885 + CTC-260F20.3 ENSG00000258674.5 19627036 0.82 0.73 17288 33721
chr19 19627036 19648390 + YJEFN3 ENSG00000250067.7 19627036 0.72 1.0 17287 33721
chr19 19649057 19657468 + CILP2 ENSG00000160161.5 19649057 0.87 1.0 17289 11700
Expression level of Genes
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miRNAs possibly regulated by vista28965[chr19:19560401-19560757]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results