EnhancerDB
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  3. vista28966[chr19:19562909-19563265]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28966[chr19:19562909-19563265]
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Tissue distribution of vista28966
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Transcription factor that possibly regulate vista28966[chr19:19562909-19563265]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19562928 19562938 HMBOX1 JASPAR yes 70825009
chr19 19562928 19562938 HMBOX1 JASPAR yes 112786383
chr19 19562929 19562937 LBX1 JASPAR yes 70825010
chr19 19562929 19562937 LBX1 JASPAR yes 112786384
chr19 19562930 19562933 MYB TRANSFAC yes 70825011
chr19 19562930 19562933 MYB TRANSFAC yes 112786385
chr19 19562950 19562960 SP1 JASPAR yes 70825012
chr19 19562950 19562960 SP1 JASPAR yes 112786386
chr19 19562951 19562956 ETS2 TRANSFAC yes 70825013
chr19 19562951 19562956 ETS2 TRANSFAC yes 112786387
chr19 19562960 19562973 SMAD2 JASPAR yes 70825014
chr19 19562960 19562973 SMAD2 JASPAR yes 112786388
chr19 19562964 19562968 NFE TRANSFAC yes 70825015
chr19 19562964 19562968 NFE TRANSFAC yes 112786389
chr19 19562971 19562975 NFE TRANSFAC yes 70825016
chr19 19562971 19562975 NFE TRANSFAC yes 112786390
chr19 19562980 19562991 FOXA1 JASPAR yes 70825017
chr19 19562980 19562991 FOXA1 JASPAR yes 112786391
chr19 19562983 19562988 ETS2 TRANSFAC yes 70825018
chr19 19562983 19562988 ETS2 TRANSFAC yes 112786392
chr19 19562986 19562992 SOX10 JASPAR yes 70825019
chr19 19562986 19562992 SOX10 JASPAR yes 112786393
chr19 19562992 19562996 NFE TRANSFAC yes 70825020
chr19 19562992 19562996 NFE TRANSFAC yes 112786394
chr19 19563009 19563019 RORA JASPAR yes 70825021
chr19 19563009 19563019 RORA JASPAR yes 112786395
chr19 19563010 19563023 NR2F1 JASPAR yes 70825022
chr19 19563010 19563023 NR2F1 JASPAR yes 112786396
chr19 19563011 19563031 PPARG JASPAR yes 70825023
chr19 19563011 19563031 PPARG JASPAR yes 112786397
chr19 19563014 19563018 ESR1 TRANSFAC yes 70825024
chr19 19563014 19563018 ESR1 TRANSFAC yes 112786398
chr19 19563033 19563045 E2F1 JASPAR yes 70825025
chr19 19563033 19563045 E2F1 JASPAR yes 112786399
chr19 19563039 19563049 NEUROG2 JASPAR yes 70825026
chr19 19563039 19563049 NEUROG2 JASPAR yes 112786400
chr19 19563040 19563050 MAX JASPAR yes 70825027
chr19 19563040 19563050 MAX JASPAR yes 112786401
chr19 19563047 19563052 ETS2 TRANSFAC yes 70825028
chr19 19563047 19563052 ETS2 TRANSFAC yes 112786402
chr19 19563073 19563084 ESRRA JASPAR yes 70825029
chr19 19563073 19563084 ESRRA JASPAR yes 112786403
chr19 19563102 19563112 TCF4 JASPAR yes 70825030
chr19 19563102 19563112 TCF4 JASPAR yes 112786404
chr19 19563104 19563113 ZEB1 JASPAR yes 70825031
chr19 19563104 19563113 ZEB1 JASPAR yes 112786405
chr19 19563106 19563111 SP1 TRANSFAC yes 70825032
chr19 19563106 19563111 SP1 TRANSFAC yes 112786406
chr19 19563109 19563114 SP1 TRANSFAC yes 70825033
chr19 19563109 19563114 SP1 TRANSFAC yes 112786407
chr19 19563110 19563130 ESR1 JASPAR yes 70825034
chr19 19563110 19563130 ESR1 JASPAR yes 112786408
chr19 19563153 19563157 NFE TRANSFAC yes 70825035
chr19 19563153 19563157 NFE TRANSFAC yes 112786409
chr19 19563164 19563174 MZF1 JASPAR yes 70825036
chr19 19563164 19563174 MZF1 JASPAR yes 112786410
chr19 19563167 19563172 TFAP2A TRANSFAC yes 70825037
chr19 19563167 19563172 TFAP2A TRANSFAC yes 112786411
chr19 19563167 19563173 MZF1 JASPAR yes 70825038
chr19 19563167 19563173 MZF1 JASPAR yes 112786412
chr19 19563188 19563193 ETS2 TRANSFAC yes 70825039
chr19 19563188 19563193 ETS2 TRANSFAC yes 112786413
chr19 19563195 19563201 LEF1 TRANSFAC yes 70825040
chr19 19563195 19563201 SOX10 JASPAR yes 70825041
chr19 19563195 19563201 LEF1 TRANSFAC yes 112786414
chr19 19563195 19563201 SOX10 JASPAR yes 112786415
chr19 19563200 19563203 MYB TRANSFAC yes 70825042
chr19 19563200 19563203 MYB TRANSFAC yes 112786416
chr19 19563205 19563216 NFE2L2 JASPAR yes 70825043
chr19 19563205 19563216 NFE2L2 JASPAR yes 112786417
chr19 19563208 19563218 NFIA JASPAR yes 70825044
chr19 19563208 19563218 NFIA JASPAR yes 112786418
chr19 19563209 19563218 NFIX JASPAR yes 70825045
chr19 19563209 19563218 NFIX JASPAR yes 112786419
chr19 19563210 19563216 NFIC JASPAR yes 70825046
chr19 19563210 19563216 NFIC JASPAR yes 112786420
chr19 19563228 19563234 ETS1 JASPAR yes 70825047
chr19 19563228 19563234 SPI1 JASPAR yes 70825048
chr19 19563228 19563234 ETS1 JASPAR yes 112786421
chr19 19563228 19563234 SPI1 JASPAR yes 112786422
chr19 19563228 19563240 TEAD1 JASPAR yes 70825049
chr19 19563228 19563240 TEAD1 JASPAR yes 112786423
chr19 19563230 19563240 TEAD1 JASPAR yes 70825050
chr19 19563230 19563240 TEAD4 JASPAR yes 70825051
chr19 19563230 19563240 TEAD1 JASPAR yes 112786424
chr19 19563230 19563240 TEAD4 JASPAR yes 112786425
chr19 19563262 19563274 YY1 JASPAR yes 70825052
chr19 19563262 19563274 YY1 JASPAR yes 112786426
SNP sites on vista28966[chr19:19562909-19563265]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28966[chr19:19562909-19563265]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 19496635 19619740 + GATAD2A ENSG00000167491.13 19496635 0.69 1.0 17284 33726
chr19 19623227 19626838 - TSSK6 ENSG00000178093.12 19626838 0.86 1.0 17285 36427
chr19 19626545 19644285 + NDUFA13 ENSG00000186010.14 19626545 0.7 0.86 17286 36720
chr19 19627036 19646885 + CTC-260F20.3 ENSG00000258674.5 19627036 0.82 0.73 17288 36229
chr19 19627036 19648390 + YJEFN3 ENSG00000250067.7 19627036 0.72 1.0 17287 36229
chr19 19649057 19657468 + CILP2 ENSG00000160161.5 19649057 0.87 1.0 17289 14208
Expression level of Genes
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miRNAs possibly regulated by vista28966[chr19:19562909-19563265]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results