EnhancerDB
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  3. vista28972[chr19:19589693-19590012]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28972[chr19:19589693-19590012]
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Tissue distribution of vista28972
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Transcription factor that possibly regulate vista28972[chr19:19589693-19590012]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19589685 19589699 POU1F1 JASPAR yes 70825342
chr19 19589685 19589699 POU1F1 JASPAR yes 112789464
chr19 19589686 19589698 POU3F1 JASPAR yes 70825343
chr19 19589686 19589698 POU3F2 JASPAR yes 70825344
chr19 19589686 19589698 POU3F1 JASPAR yes 112789465
chr19 19589686 19589698 POU3F2 JASPAR yes 112789466
chr19 19589686 19589699 POU3F3 JASPAR yes 70825345
chr19 19589686 19589699 POU3F3 JASPAR yes 112789467
chr19 19589687 19589699 POU2F1 JASPAR yes 70825346
chr19 19589687 19589699 POU2F1 JASPAR yes 112789468
chr19 19589688 19589697 POU3F4 JASPAR yes 70825347
chr19 19589688 19589697 POU5F1B JASPAR yes 70825348
chr19 19589688 19589697 POU3F4 JASPAR yes 112789469
chr19 19589688 19589697 POU5F1B JASPAR yes 112789470
chr19 19589689 19589703 FOXF2 JASPAR yes 70825349
chr19 19589689 19589703 FOXF2 JASPAR yes 112789471
chr19 19589694 19589708 POU4F1 JASPAR yes 70825350
chr19 19589694 19589708 POU4F1 JASPAR yes 112789472
chr19 19589694 19589710 POU4F2 JASPAR yes 70825351
chr19 19589694 19589710 POU4F3 JASPAR yes 70825352
chr19 19589694 19589710 POU4F2 JASPAR yes 112789473
chr19 19589694 19589710 POU4F3 JASPAR yes 112789474
chr19 19589699 19589702 MYB TRANSFAC yes 70825353
chr19 19589699 19589702 MYB TRANSFAC yes 112789475
chr19 19589702 19589714 MEF2A JASPAR yes 70825354
chr19 19589702 19589714 MEF2A JASPAR yes 112789476
chr19 19589703 19589713 MEF2A JASPAR yes 70825355
chr19 19589703 19589713 MEF2A JASPAR yes 112789477
chr19 19589718 19589722 YY1 TRANSFAC yes 70825356
chr19 19589718 19589722 YY1 TRANSFAC yes 112789478
chr19 19589719 19589732 POU3F3 JASPAR yes 70825357
chr19 19589719 19589732 POU3F3 JASPAR yes 112789479
chr19 19589755 19589767 NHLH1 JASPAR yes 70825358
chr19 19589755 19589767 NHLH1 JASPAR yes 112789480
chr19 19589756 19589766 NHLH1 JASPAR yes 70825359
chr19 19589756 19589766 NHLH1 JASPAR yes 112789481
chr19 19589759 19589773 NR2F1 JASPAR yes 70825360
chr19 19589759 19589773 NR2F1 JASPAR yes 112789482
chr19 19589775 19589790 MEF2A JASPAR yes 70825361
chr19 19589775 19589790 MEF2A JASPAR yes 112789483
chr19 19589776 19589791 MEF2C JASPAR yes 70825362
chr19 19589776 19589791 MEF2C JASPAR yes 112789484
chr19 19589779 19589783 YY1 TRANSFAC yes 70825363
chr19 19589779 19589783 YY1 TRANSFAC yes 112789485
chr19 19589805 19589811 SOX10 JASPAR yes 70825364
chr19 19589805 19589811 SOX10 JASPAR yes 112789486
chr19 19589830 19589844 IRF7 JASPAR yes 70825365
chr19 19589830 19589844 IRF7 JASPAR yes 112789487
chr19 19589831 19589845 STAT1 JASPAR yes 70825366
chr19 19589831 19589845 STAT1 JASPAR yes 112789488
chr19 19589831 19589846 STAT2 JASPAR yes 70825367
chr19 19589831 19589846 STAT2 JASPAR yes 112789489
chr19 19589839 19589842 MYB TRANSFAC yes 70825368
chr19 19589839 19589842 MYB TRANSFAC yes 112789490
chr19 19589849 19589870 ZNF263 JASPAR yes 70825369
chr19 19589849 19589870 ZNF263 JASPAR yes 112789491
chr19 19589854 19589875 ZNF263 JASPAR yes 70825370
chr19 19589854 19589875 ZNF263 JASPAR yes 112789492
chr19 19589917 19589938 IRF1 JASPAR yes 70825371
chr19 19589917 19589938 IRF1 JASPAR yes 112789493
chr19 19589960 19589975 HNF4A JASPAR yes 70825372
chr19 19589960 19589975 HNF4A JASPAR yes 112789494
chr19 19589961 19589975 NR2F1 JASPAR yes 70825373
chr19 19589961 19589975 NR2F1 JASPAR yes 112789495
chr19 19589961 19589976 HNF4G JASPAR yes 70825374
chr19 19589961 19589976 HNF4G JASPAR yes 112789496
chr19 19589977 19589988 DUX4 JASPAR yes 70825375
chr19 19589977 19589988 DUX4 JASPAR yes 112789497
chr19 19590011 19590015 YY1 TRANSFAC yes 70825376
chr19 19590011 19590015 YY1 TRANSFAC yes 112789498
SNP sites on vista28972[chr19:19589693-19590012]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28972[chr19:19589693-19590012]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 19496635 19619740 + GATAD2A ENSG00000167491.13 19496635 0.69 1.0 17284 6942
chr19 19623227 19626838 - TSSK6 ENSG00000178093.12 19626838 0.86 1.0 17285 63174
chr19 19626545 19644285 + NDUFA13 ENSG00000186010.14 19626545 0.7 0.86 17286 63467
chr19 19627036 19646885 + CTC-260F20.3 ENSG00000258674.5 19627036 0.82 0.73 17288 62976
chr19 19627036 19648390 + YJEFN3 ENSG00000250067.7 19627036 0.72 1.0 17287 62976
chr19 19649057 19657468 + CILP2 ENSG00000160161.5 19649057 0.87 1.0 17289 40955
Expression level of Genes
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miRNAs possibly regulated by vista28972[chr19:19589693-19590012]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results