EnhancerDB
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  3. vista28977[chr19:19708713-19709032]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28977[chr19:19708713-19709032]
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Tissue distribution of vista28977
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Transcription factor that possibly regulate vista28977[chr19:19708713-19709032]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 19708428 19708987 POLR2A UCSC Txn Factor no Conserved 108400804
chr19 19708599 19709055 RUNX3 UCSC Txn Factor no Conserved 108400813
chr19 19708625 19709036 YY1 UCSC Txn Factor no Conserved 108400820
chr19 19708666 19709143 NFIC UCSC Txn Factor no Conserved 108400825
chr19 19708674 19709006 EBF1 UCSC Txn Factor no Conserved 108400828
chr19 19708692 19709142 RELA UCSC Txn Factor no Conserved 108400829
chr19 19708716 19708731 HNF4A JASPAR yes 70825773
chr19 19708716 19708731 HNF4A JASPAR yes 112794561
chr19 19708717 19708731 NR2F1 JASPAR yes 70825774
chr19 19708717 19708731 NR2F1 JASPAR yes 112794562
chr19 19708717 19708732 HNF4G JASPAR yes 70825775
chr19 19708717 19708732 HNF4G JASPAR yes 112794563
chr19 19708748 19708752 H1TF2 TRANSFAC yes 70825776
chr19 19708748 19708752 NFE TRANSFAC yes 70825777
chr19 19708748 19708752 SRF TRANSFAC yes 70825778
chr19 19708748 19708752 H1TF2 TRANSFAC yes 112794564
chr19 19708748 19708752 NFE TRANSFAC yes 112794565
chr19 19708748 19708752 SRF TRANSFAC yes 112794566
chr19 19708755 19708762 SPIB JASPAR yes 70825779
chr19 19708755 19708762 SPIB JASPAR yes 112794567
chr19 19708771 19708780 RUNX2 JASPAR yes 70825780
chr19 19708771 19708780 RUNX2 JASPAR yes 112794568
chr19 19708771 19708781 RUNX3 JASPAR yes 70825781
chr19 19708771 19708781 RUNX3 JASPAR yes 112794569
chr19 19708795 19708806 BATF JASPAR yes 70825782
chr19 19708795 19708806 BATF JASPAR yes 112794570
chr19 19708798 19708809 NFE2L2 JASPAR yes 70825783
chr19 19708798 19708809 NFE2L2 JASPAR yes 112794571
chr19 19708820 19708824 ESR1 TRANSFAC yes 70825784
chr19 19708820 19708824 ESR1 TRANSFAC yes 112794572
chr19 19708826 19708843 PAX1 JASPAR yes 70825785
chr19 19708826 19708843 PAX1 JASPAR yes 112794573
chr19 19708827 19708844 PAX1 JASPAR yes 70825786
chr19 19708827 19708844 PAX1 JASPAR yes 112794574
chr19 19708840 19708850 RORA JASPAR yes 70825787
chr19 19708840 19708850 RORA JASPAR yes 112794575
chr19 19708841 19708852 ESRRA JASPAR yes 70825788
chr19 19708841 19708852 ESRRB JASPAR yes 70825789
chr19 19708841 19708852 ESRRA JASPAR yes 112794576
chr19 19708841 19708852 ESRRB JASPAR yes 112794577
chr19 19708841 19708854 NR2F1 JASPAR yes 70825790
chr19 19708841 19708854 NR2F1 JASPAR yes 112794578
chr19 19708843 19708851 NR4A2 JASPAR yes 70825791
chr19 19708843 19708851 NR4A2 JASPAR yes 112794579
chr19 19708843 19708857 RXRB JASPAR yes 70825792
chr19 19708843 19708857 RXRG JASPAR yes 70825793
chr19 19708843 19708857 RXRB JASPAR yes 112794580
chr19 19708843 19708857 RXRG JASPAR yes 112794581
chr19 19708845 19708849 ESR1 TRANSFAC yes 70825794
chr19 19708845 19708849 ESR1 TRANSFAC yes 112794582
chr19 19708859 19708874 LEF1 JASPAR yes 70825795
chr19 19708859 19708874 LEF1 JASPAR yes 112794583
chr19 19708874 19708885 BATF JASPAR yes 70825796
chr19 19708874 19708885 BATF JASPAR yes 112794584
chr19 19708899 19708908 THAP1 JASPAR yes 70825797
chr19 19708899 19708908 THAP1 JASPAR yes 112794585
chr19 19708902 19708906 LFA1 TRANSFAC yes 70825798
chr19 19708902 19708906 LFA1 TRANSFAC yes 112794586
chr19 19708912 19708916 LFA1 TRANSFAC yes 70825799
chr19 19708912 19708916 LFA1 TRANSFAC yes 112794587
chr19 19708915 19708919 YY1 TRANSFAC yes 70825800
chr19 19708915 19708919 YY1 TRANSFAC yes 112794588
chr19 19708920 19708924 LFA1 TRANSFAC yes 70825801
chr19 19708920 19708924 LFA1 TRANSFAC yes 112794589
chr19 19708930 19708935 TFAP2A TRANSFAC yes 70825802
chr19 19708930 19708935 TFAP2A TRANSFAC yes 112794590
chr19 19708930 19708936 MZF1 JASPAR yes 70825803
chr19 19708930 19708936 MZF1 JASPAR yes 112794591
chr19 19708931 19708942 NFKB1 JASPAR yes 70825804
chr19 19708931 19708942 NFKB1 JASPAR yes 112794592
chr19 19708932 19708942 RELA JASPAR yes 70825805
chr19 19708932 19708942 RELA JASPAR yes 112794593
chr19 19708939 19708951 SRF JASPAR yes 70825806
chr19 19708939 19708951 SRF JASPAR yes 112794594
chr19 19708945 19708963 RARA JASPAR yes 70825807
chr19 19708945 19708963 RARA JASPAR yes 112794595
chr19 19708954 19708971 RARA JASPAR yes 70825808
chr19 19708954 19708971 RARA JASPAR yes 112794596
chr19 19708983 19708996 ELF3 JASPAR yes 70825809
chr19 19708983 19708996 ELF3 JASPAR yes 112794597
chr19 19708984 19708995 ELF5 JASPAR yes 70825810
chr19 19708984 19708995 ELF5 JASPAR yes 112794598
chr19 19708984 19708996 EHF JASPAR yes 70825811
chr19 19708984 19708996 ELF1 JASPAR yes 70825812
chr19 19708984 19708996 ELF4 JASPAR yes 70825813
chr19 19708984 19708996 EHF JASPAR yes 112794599
chr19 19708984 19708996 ELF1 JASPAR yes 112794600
chr19 19708984 19708996 ELF4 JASPAR yes 112794601
chr19 19708984 19708997 ELF1 JASPAR yes 70825814
chr19 19708984 19708997 ELF1 JASPAR yes 112794602
chr19 19708985 19708993 FEV JASPAR yes 70825815
chr19 19708985 19708993 FEV JASPAR yes 112794603
chr19 19708990 19709004 POU1F1 JASPAR yes 70825816
chr19 19708990 19709004 POU1F1 JASPAR yes 112794604
chr19 19708994 19709010 SRF JASPAR yes 70825817
chr19 19708994 19709010 SRF JASPAR yes 112794605
chr19 19708994 19709012 SRF JASPAR yes 70825818
chr19 19708994 19709012 SRF JASPAR yes 112794606
chr19 19709000 19709004 YY1 TRANSFAC yes 70825819
chr19 19709000 19709004 YY1 TRANSFAC yes 112794607
chr19 19709030 19709043 ELF1 JASPAR yes 70825820
chr19 19709030 19709043 ELF1 JASPAR yes 112794608
SNP sites on vista28977[chr19:19708713-19709032]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28977[chr19:19708713-19709032]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 19623227 19626838 - TSSK6 ENSG00000178093.12 19626838 0.86 1.0 17285 18125
chr19 19626545 19644285 + NDUFA13 ENSG00000186010.14 19626545 0.7 0.86 17286 17832
chr19 19627036 19646885 + CTC-260F20.3 ENSG00000258674.5 19627036 0.82 0.73 17288 18323
chr19 19627036 19648390 + YJEFN3 ENSG00000250067.7 19627036 0.72 1.0 17287 18323
chr19 19649057 19657468 + CILP2 ENSG00000160161.5 19649057 0.87 1.0 17289 40344
chr19 19672522 19729725 - PBX4 ENSG00000105717.9 19729725 0.95 1.0 17290 79307
chr19 19734477 19739739 - LPAR2 ENSG00000064547.9 19739739 0.85 1.0 17291 69293
chr19 19740285 19754476 - GMIP ENSG00000089639.6 19754476 0.9 1.0 17292 54556
chr19 19756007 19774502 - ATP13A1 ENSG00000105726.12 19774502 0.63 1.0 17293 34530
chr19 19779605 19794318 + ZNF101 ENSG00000181896.7 19779605 0.94 0.99 17294 29427
Expression level of Genes
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miRNAs possibly regulated by vista28977[chr19:19708713-19709032]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results