EnhancerDB
  1. Home
  2. Enhancers
  3. vista28983[chr19:20128543-20128860]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28983[chr19:20128543-20128860]
Back to top
Tissue distribution of vista28983
Back to top
Transcription factor that possibly regulate vista28983[chr19:20128543-20128860]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 20128603 20128606 MYB TRANSFAC yes 70826008
chr19 20128603 20128615 PROX1 JASPAR yes 70826009
chr19 20128613 20128624 PROP1 JASPAR yes 70826010
chr19 20128648 20128652 YY1 TRANSFAC yes 70826011
chr19 20128651 20128663 E2F8 JASPAR yes 70826012
chr19 20128665 20128686 IRF1 JASPAR yes 70826013
chr19 20128678 20128699 IRF1 JASPAR yes 70826014
chr19 20128682 20128696 SPI1 JASPAR yes 70826015
chr19 20128684 20128705 IRF1 JASPAR yes 70826016
chr19 20128689 20128701 IRF1 JASPAR yes 70826017
chr19 20128713 20128727 POU1F1 JASPAR yes 70826018
chr19 20128735 20128747 BHLHE23 JASPAR yes 70826019
chr19 20128736 20128746 OLIG2 JASPAR yes 70826020
chr19 20128736 20128746 OLIG3 JASPAR yes 70826021
chr19 20128761 20128772 PHOX2A JASPAR yes 70826022
chr19 20128761 20128772 PROP1 JASPAR yes 70826023
chr19 20128762 20128776 IRF7 JASPAR yes 70826024
chr19 20128767 20128771 YY1 TRANSFAC yes 70826025
chr19 20128769 20128775 TCF4 TRANSFAC yes 70826026
chr19 20128774 20128788 BATF3 JASPAR yes 70826027
chr19 20128778 20128789 FOXB1 JASPAR yes 70826028
chr19 20128783 20128803 TP63 JASPAR yes 70826029
chr19 20128784 20128802 TP53 JASPAR yes 70826030
chr19 20128784 20128802 TP73 JASPAR yes 70826031
chr19 20128819 20128823 NFE TRANSFAC yes 70826032
chr19 20128834 20128855 IRF1 JASPAR yes 70826033
chr19 20128835 20128856 IRF1 JASPAR yes 70826034
chr19 20128836 20128851 STAT2 JASPAR yes 70826035
chr19 20128837 20128852 FOXP1 JASPAR yes 70826036
chr19 20128839 20128851 IRF1 JASPAR yes 70826037
chr19 20128841 20128856 FOXP1 JASPAR yes 70826038
chr19 20128842 20128854 FOXC2 JASPAR yes 70826039
chr19 20128844 20128848 YY1 TRANSFAC yes 70826040
SNP sites on vista28983[chr19:20128543-20128860]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28983[chr19:20128543-20128860]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 20047769 20048639 - AC007204.1 ENSG00000268461.1 20048639 0.93 0.0 17299 20096
chr19 20107867 20150315 - ZNF682 ENSG00000197124.7 20150315 0.75 0.86 17300 78545
chr19 20188803 20237885 + ZNF90 ENSG00000213988.5 20188803 0.86 0.85 17301 40057
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28983[chr19:20128543-20128860]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results