EnhancerDB
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  3. vista28984[chr19:20162886-20163252]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28984[chr19:20162886-20163252]
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Tissue distribution of vista28984
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Transcription factor that possibly regulate vista28984[chr19:20162886-20163252]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 20162681 20163539 E2F1 UCSC Txn Factor no Conserved 108401067
chr19 20162856 20163296 ZNF143 UCSC Txn Factor no Conserved 108401070
chr19 20162870 20162886 SOX4 JASPAR yes 70826041
chr19 20162870 20162886 SOX4 JASPAR yes 112800436
chr19 20162967 20162983 ZNF143 JASPAR yes 70826042
chr19 20162967 20162983 ZNF143 JASPAR yes 112800438
chr19 20162971 20162986 STAT1 JASPAR yes 70826043
chr19 20162971 20162986 STAT1 JASPAR yes 112800439
chr19 20162987 20163006 RFX2 JASPAR yes 70826044
chr19 20162987 20163006 RFX2 JASPAR yes 112800440
chr19 20162989 20163004 RFX5 JASPAR yes 70826045
chr19 20162989 20163004 RFX5 JASPAR yes 112800441
chr19 20163077 20163084 SPIB JASPAR yes 70826046
chr19 20163077 20163084 SPIB JASPAR yes 112800442
chr19 20163077 20163088 FLI1 JASPAR yes 70826047
chr19 20163077 20163088 FLI1 JASPAR yes 112800443
chr19 20163078 20163086 EHF JASPAR yes 70826048
chr19 20163078 20163086 EHF JASPAR yes 112800444
chr19 20163078 20163088 SP1 JASPAR yes 70826049
chr19 20163078 20163088 SP1 JASPAR yes 112800445
chr19 20163085 20163089 LFA1 TRANSFAC yes 70826050
chr19 20163085 20163089 LFA1 TRANSFAC yes 112800446
chr19 20163089 20163095 SP1 TRANSFAC yes 70826051
chr19 20163089 20163095 SP1 TRANSFAC yes 112800447
chr19 20163090 20163095 SP1 TRANSFAC yes 70826052
chr19 20163090 20163095 SP1 TRANSFAC yes 112800448
chr19 20163140 20163155 NFYB JASPAR yes 70826053
chr19 20163140 20163155 NFYB JASPAR yes 112800449
chr19 20163142 20163158 NFYA JASPAR yes 70826054
chr19 20163142 20163158 NFYA JASPAR yes 112800450
chr19 20163143 20163161 NFYA JASPAR yes 70826055
chr19 20163143 20163161 NFYA JASPAR yes 112800451
chr19 20163147 20163151 H1TF2 TRANSFAC yes 70826056
chr19 20163147 20163151 NFE TRANSFAC yes 70826057
chr19 20163147 20163151 SRF TRANSFAC yes 70826058
chr19 20163147 20163151 H1TF2 TRANSFAC yes 112800452
chr19 20163147 20163151 NFE TRANSFAC yes 112800453
chr19 20163147 20163151 SRF TRANSFAC yes 112800454
chr19 20163184 20163196 INSM1 JASPAR yes 70826059
chr19 20163184 20163196 INSM1 JASPAR yes 112800455
chr19 20163189 20163196 SP1 TRANSFAC yes 70826060
chr19 20163189 20163196 SP1 TRANSFAC yes 112800456
chr19 20163191 20163196 SP1 TRANSFAC yes 70826061
chr19 20163191 20163196 SP1 TRANSFAC yes 112800457
chr19 20163191 20163210 REST JASPAR yes 70826062
chr19 20163191 20163210 REST JASPAR yes 112800458
chr19 20163215 20163229 PLAG1 JASPAR yes 70826063
chr19 20163215 20163229 PLAG1 JASPAR yes 112800459
chr19 20163224 20163232 TBX5 JASPAR yes 70826064
chr19 20163224 20163232 TBX5 JASPAR yes 112800460
SNP sites on vista28984[chr19:20162886-20163252]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28984[chr19:20162886-20163252]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 20107867 20150315 - ZNF682 ENSG00000197124.7 20150315 0.75 0.86 17300 87429
chr19 20188803 20237885 + ZNF90 ENSG00000213988.5 20188803 0.86 0.85 17301 74449
Expression level of Genes
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miRNAs possibly regulated by vista28984[chr19:20162886-20163252]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results