EnhancerDB
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  3. vista2900[chr1:110810528-110810781]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2900[chr1:110810528-110810781]
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Tissue distribution of vista2900
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Transcription factor that possibly regulate vista2900[chr1:110810528-110810781]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110810561 110810564 MYB TRANSFAC yes 118349038
chr1 110810564 110810570 TCF4 TRANSFAC yes 118349039
chr1 110810581 110810591 HMBOX1 JASPAR yes 118349040
chr1 110810584 110810595 CEBPA JASPAR yes 118349041
chr1 110810585 110810596 CEBPB JASPAR yes 118349042
chr1 110810594 110810597 MYB TRANSFAC yes 118349043
chr1 110810599 110810619 TP63 JASPAR yes 118349044
chr1 110810600 110810618 TP53 JASPAR yes 118349045
chr1 110810600 110810618 TP63 JASPAR yes 118349046
chr1 110810600 110810618 TP73 JASPAR yes 118349047
chr1 110810602 110810617 TP53 JASPAR yes 118349048
chr1 110810603 110810614 NFE2L2 JASPAR yes 118349049
chr1 110810617 110810628 STAT3 JASPAR yes 118349050
chr1 110810618 110810633 HSF1 JASPAR yes 118349051
chr1 110810619 110810632 HSF1 JASPAR yes 118349052
chr1 110810619 110810632 HSF2 JASPAR yes 118349053
chr1 110810619 110810632 HSF4 JASPAR yes 118349054
chr1 110810629 110810639 HOXC10 JASPAR yes 118349055
chr1 110810629 110810639 HOXD11 JASPAR yes 118349056
chr1 110810629 110810640 HOXA10 JASPAR yes 118349057
chr1 110810629 110810640 HOXC11 JASPAR yes 118349058
chr1 110810629 110810640 HOXC12 JASPAR yes 118349059
chr1 110810634 110810646 ZBTB7B JASPAR yes 118349060
chr1 110810655 110810668 NR2F1 JASPAR yes 118349061
chr1 110810659 110810663 ESR1 TRANSFAC yes 118349062
chr1 110810671 110810675 TEAD2 TRANSFAC yes 118349063
chr1 110810673 110810676 MYB TRANSFAC yes 118349064
chr1 110810678 110810684 MZF1 JASPAR yes 118349065
chr1 110810694 110810698 TEAD2 TRANSFAC yes 118349066
chr1 110810696 110810699 MYB TRANSFAC yes 118349067
chr1 110810705 110810716 CEBPA JASPAR yes 118349068
chr1 110810705 110810717 HLF JASPAR yes 118349069
chr1 110810706 110810717 CEBPB JASPAR yes 118349070
chr1 110810722 110810736 SPI1 JASPAR yes 118349071
chr1 110810722 110810736 SPIC JASPAR yes 118349072
chr1 110810726 110810732 MZF1 JASPAR yes 118349073
chr1 110810735 110810740 GATA1 TRANSFAC yes 118349074
chr1 110810745 110810749 YY1 TRANSFAC yes 118349075
chr1 110810749 110810770 IRF1 JASPAR yes 118349076
chr1 110810767 110810777 NFIA JASPAR yes 118349077
chr1 110810769 110810775 NFIC JASPAR yes 118349078
chr1 110810773 110810777 YY1 TRANSFAC yes 118349079
SNP sites on vista2900[chr1:110810528-110810781]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110810638 rs140990864 AC A
HOXA10 HOXC10 HOXC11 HOXC12 HOXD11 ZBTB7B
551723
chr1 110810638 rs766099822 AC A
HOXA10 HOXC10 HOXC11 HOXC12 HOXD11 ZBTB7B
551724
chr1 110810682 rs7515402 C T
MZF1
551725
chr1 110810695 rs200382985 T TAG
TEAD2
551726
chr1 110810695 rs375109250 T TAG
TEAD2
551727
chr1 110810756 rs200333109 A AT
IRF1
551728
Genes possibly regulated by vista2900[chr1:110810528-110810781]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110753965 110825722 + KCNC4 ENSG00000116396.9 110753965 0.77 1.0 997 43437
chr1 110881128 110889299 + RBM15 ENSG00000162775.10 110881128 0.75 0.99 998 29653
Expression level of Genes
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miRNAs possibly regulated by vista2900[chr1:110810528-110810781]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results