EnhancerDB
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  3. vista2902[chr1:110895542-110895785]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2902[chr1:110895542-110895785]
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Tissue distribution of vista2902
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Transcription factor that possibly regulate vista2902[chr1:110895542-110895785]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 110895542 110895557 FOXP1 JASPAR yes 118349140
chr1 110895543 110895549 TBP TRANSFAC yes 118349141
chr1 110895543 110895558 FOXP1 JASPAR yes 118349142
chr1 110895543 110895564 IRF1 JASPAR yes 118349143
chr1 110895544 110895559 FOXP1 JASPAR yes 118349144
chr1 110895544 110895565 IRF1 JASPAR yes 118349145
chr1 110895545 110895560 FOXP1 JASPAR yes 118349146
chr1 110895545 110895566 IRF1 JASPAR yes 118349147
chr1 110895546 110895561 FOXP1 JASPAR yes 118349148
chr1 110895546 110895567 IRF1 JASPAR yes 118349149
chr1 110895547 110895562 FOXP1 JASPAR yes 118349150
chr1 110895547 110895568 IRF1 JASPAR yes 118349151
chr1 110895548 110895563 FOXP1 JASPAR yes 118349152
chr1 110895548 110895569 IRF1 JASPAR yes 118349153
chr1 110895549 110895564 FOXP1 JASPAR yes 118349154
chr1 110895549 110895570 IRF1 JASPAR yes 118349155
chr1 110895550 110895565 FOXP1 JASPAR yes 118349156
chr1 110895551 110895566 FOXP1 JASPAR yes 118349157
chr1 110895551 110895572 IRF1 JASPAR yes 118349158
chr1 110895552 110895567 FOXP1 JASPAR yes 118349159
chr1 110895552 110895573 IRF1 JASPAR yes 118349160
chr1 110895553 110895568 FOXP1 JASPAR yes 118349161
chr1 110895600 110895607 NKX3-1 JASPAR yes 118349162
chr1 110895602 110895623 IRF1 JASPAR yes 118349163
chr1 110895603 110895608 GATA1 TRANSFAC yes 118349164
chr1 110895604 110895625 IRF1 JASPAR yes 118349165
chr1 110895606 110895627 IRF1 JASPAR yes 118349166
chr1 110895610 110895631 IRF1 JASPAR yes 118349167
chr1 110895612 110895627 PRDM1 JASPAR yes 118349168
chr1 110895612 110895627 STAT2 JASPAR yes 118349169
chr1 110895613 110895627 SPIC JASPAR yes 118349170
chr1 110895613 110895627 STAT1 JASPAR yes 118349171
chr1 110895615 110895630 FOXP1 JASPAR yes 118349172
chr1 110895617 110895632 MEF2C JASPAR yes 118349173
chr1 110895635 110895654 PAX5 JASPAR yes 118349174
chr1 110895643 110895647 NFE TRANSFAC yes 118349175
chr1 110895665 110895675 SREBF1 JASPAR yes 118349176
chr1 110895665 110895675 SREBF2 JASPAR yes 118349177
chr1 110895670 110895678 NR4A2 JASPAR yes 118349178
chr1 110895676 110895690 TLX1 JASPAR yes 118349179
chr1 110895676 110895694 ESR2 JASPAR yes 118349180
chr1 110895677 110895694 ESR1 JASPAR yes 118349181
chr1 110895752 110895765 SMAD2 JASPAR yes 118349182
SNP sites on vista2902[chr1:110895542-110895785]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 110895698 rs139036077 C G,T no 552216
chr1 110895783 rs543667551 G T no 552217
Genes possibly regulated by vista2902[chr1:110895542-110895785]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110881128 110889299 + RBM15 ENSG00000162775.10 110881128 0.75 0.99 998 85586
chr1 110905470 110933704 - SLC16A4 ENSG00000168679.13 110933704 0.95 0.92 999 62081
chr1 110943871 110950564 - LAMTOR5 ENSG00000134248.9 110950564 0.78 1.0 1000 45221
chr1 110993822 110999976 + PROK1 ENSG00000143125.5 110993822 1.0 0.99 1001 1963
Expression level of Genes
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miRNAs possibly regulated by vista2902[chr1:110895542-110895785]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results