EnhancerDB
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  3. vista2908[chr1:111053467-111053812]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2908[chr1:111053467-111053812]
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Tissue distribution of vista2908
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Transcription factor that possibly regulate vista2908[chr1:111053467-111053812]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 111053465 111053480 PRDM1 JASPAR yes 31487008
chr1 111053465 111053480 PRDM1 JASPAR yes 118349517
chr1 111053474 111053490 ZNF143 JASPAR yes 31487009
chr1 111053474 111053490 ZNF143 JASPAR yes 118349518
chr1 111053474 111053491 RARA JASPAR yes 31487010
chr1 111053474 111053491 RARA JASPAR yes 118349519
chr1 111053489 111053501 SRF JASPAR yes 31487011
chr1 111053489 111053501 SRF JASPAR yes 118349520
chr1 111053494 111053498 TEAD2 TRANSFAC yes 31487012
chr1 111053494 111053498 TEAD2 TRANSFAC yes 118349521
chr1 111053494 111053499 TBP TRANSFAC yes 31487013
chr1 111053494 111053499 TBP TRANSFAC yes 118349522
chr1 111053521 111053526 SP1 TRANSFAC yes 31487014
chr1 111053521 111053526 SP1 TRANSFAC yes 118349523
chr1 111053525 111053529 LFA1 TRANSFAC yes 31487015
chr1 111053525 111053529 LFA1 TRANSFAC yes 118349524
chr1 111053534 111053542 BARX1 JASPAR yes 31487016
chr1 111053534 111053542 BARX1 JASPAR yes 118349525
chr1 111053551 111053559 FOXL1 JASPAR yes 31487017
chr1 111053551 111053559 FOXL1 JASPAR yes 118349526
chr1 111053555 111053559 TEAD2 TRANSFAC yes 31487018
chr1 111053555 111053559 TEAD2 TRANSFAC yes 118349527
chr1 111053562 111053572 SREBF1 JASPAR yes 31487019
chr1 111053562 111053572 SREBF2 JASPAR yes 31487020
chr1 111053562 111053572 SREBF1 JASPAR yes 118349528
chr1 111053562 111053572 SREBF2 JASPAR yes 118349529
chr1 111053580 111053586 SP1 TRANSFAC yes 31487021
chr1 111053580 111053586 SP1 TRANSFAC yes 118349530
chr1 111053586 111053590 YY1 TRANSFAC yes 31487022
chr1 111053586 111053590 YY1 TRANSFAC yes 118349531
chr1 111053609 111053615 MZF1 JASPAR yes 31487023
chr1 111053609 111053615 MZF1 JASPAR yes 118349532
chr1 111053634 111053640 MZF1 JASPAR yes 31487024
chr1 111053634 111053640 MZF1 JASPAR yes 118349533
chr1 111053664 111053680 ZNF143 JASPAR yes 31487025
chr1 111053664 111053680 ZNF143 JASPAR yes 118349534
chr1 111053673 111053687 CREB3L1 JASPAR yes 31487026
chr1 111053673 111053687 CREB3L1 JASPAR yes 118349535
chr1 111053674 111053686 HES5 JASPAR yes 31487027
chr1 111053674 111053686 HES7 JASPAR yes 31487028
chr1 111053674 111053686 HES5 JASPAR yes 118349536
chr1 111053674 111053686 HES7 JASPAR yes 118349537
chr1 111053675 111053685 CLOCK JASPAR yes 31487029
chr1 111053675 111053685 HEY1 JASPAR yes 31487030
chr1 111053675 111053685 HEY2 JASPAR yes 31487031
chr1 111053675 111053685 MAX JASPAR yes 31487032
chr1 111053675 111053685 MNT JASPAR yes 31487033
chr1 111053675 111053685 CLOCK JASPAR yes 118349538
chr1 111053675 111053685 HEY1 JASPAR yes 118349539
chr1 111053675 111053685 HEY2 JASPAR yes 118349540
chr1 111053675 111053685 MAX JASPAR yes 118349541
chr1 111053675 111053685 MNT JASPAR yes 118349542
chr1 111053676 111053683 USF1 JASPAR yes 31487034
chr1 111053676 111053683 USF1 JASPAR yes 118349543
chr1 111053676 111053686 MAX JASPAR yes 31487035
chr1 111053676 111053686 MAX JASPAR yes 118349544
chr1 111053677 111053682 MYC TRANSFAC yes 31487036
chr1 111053677 111053682 USF1 TRANSFAC yes 31487037
chr1 111053677 111053682 USF2 TRANSFAC yes 31487038
chr1 111053677 111053682 MYC TRANSFAC yes 118349545
chr1 111053677 111053682 USF1 TRANSFAC yes 118349546
chr1 111053677 111053682 USF2 TRANSFAC yes 118349547
chr1 111053694 111053709 ZIC3 JASPAR yes 31487039
chr1 111053694 111053709 ZIC4 JASPAR yes 31487040
chr1 111053694 111053709 ZIC3 JASPAR yes 118349548
chr1 111053694 111053709 ZIC4 JASPAR yes 118349549
chr1 111053695 111053709 GLIS2 JASPAR yes 31487041
chr1 111053695 111053709 GLIS3 JASPAR yes 31487042
chr1 111053695 111053709 GLIS2 JASPAR yes 118349550
chr1 111053695 111053709 GLIS3 JASPAR yes 118349551
chr1 111053705 111053715 ALX3 JASPAR yes 31487043
chr1 111053705 111053715 ALX3 JASPAR yes 118349552
chr1 111053706 111053719 DUXA JASPAR yes 31487044
chr1 111053706 111053719 DUXA JASPAR yes 118349553
chr1 111053707 111053718 DUX4 JASPAR yes 31487045
chr1 111053707 111053718 PHOX2A JASPAR yes 31487046
chr1 111053707 111053718 PROP1 JASPAR yes 31487047
chr1 111053707 111053718 DUX4 JASPAR yes 118349554
chr1 111053707 111053718 PHOX2A JASPAR yes 118349555
chr1 111053707 111053718 PROP1 JASPAR yes 118349556
chr1 111053709 111053714 MYB TRANSFAC yes 31487048
chr1 111053709 111053714 MYB TRANSFAC yes 118349557
chr1 111053711 111053717 JUN TRANSFAC yes 31487049
chr1 111053711 111053717 JUN TRANSFAC yes 118349558
chr1 111053716 111053726 GCM2 JASPAR yes 31487050
chr1 111053716 111053726 GCM2 JASPAR yes 118349559
chr1 111053717 111053727 ZNF740 JASPAR yes 31487051
chr1 111053717 111053727 ZNF740 JASPAR yes 118349560
chr1 111053719 111053729 SP1 JASPAR yes 31487052
chr1 111053719 111053729 SP1 JASPAR yes 118349561
chr1 111053722 111053727 SP1 TRANSFAC yes 31487053
chr1 111053722 111053727 SP1 TRANSFAC yes 118349562
chr1 111053724 111053735 NFKB1 JASPAR yes 31487054
chr1 111053724 111053735 NFKB1 JASPAR yes 118349563
chr1 111053724 111053737 NFKB2 JASPAR yes 31487055
chr1 111053724 111053737 NFKB2 JASPAR yes 118349564
chr1 111053725 111053735 REL JASPAR yes 31487056
chr1 111053725 111053735 REL JASPAR yes 118349565
chr1 111053725 111053736 NFKB1 JASPAR yes 31487057
chr1 111053725 111053736 NFKB1 JASPAR yes 118349566
chr1 111053730 111053740 MZF1 JASPAR yes 31487058
chr1 111053730 111053740 MZF1 JASPAR yes 118349567
chr1 111053732 111053747 AR JASPAR yes 31487059
chr1 111053732 111053747 AR JASPAR yes 118349568
chr1 111053761 111053772 EBF1 JASPAR yes 31487060
chr1 111053761 111053772 EBF1 JASPAR yes 118349569
chr1 111053761 111053776 ZBTB33 JASPAR yes 31487061
chr1 111053761 111053776 ZBTB33 JASPAR yes 118349570
chr1 111053783 111053787 TEAD2 TRANSFAC yes 31487062
chr1 111053783 111053787 TEAD2 TRANSFAC yes 118349571
chr1 111053783 111053788 TBP TRANSFAC yes 31487063
chr1 111053783 111053788 TBP TRANSFAC yes 118349572
chr1 111053790 111053801 NFKB1 JASPAR yes 31487064
chr1 111053790 111053801 NFKB1 JASPAR yes 118349573
chr1 111053801 111053812 NRF1 JASPAR yes 31487065
chr1 111053801 111053812 NRF1 JASPAR yes 118349574
SNP sites on vista2908[chr1:111053467-111053812]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 111053518 rs72679914 A T no 553489
chr1 111053523 rs56127942 G T
SP1
553490
chr1 111053632 rs561780622 G T no 553491
chr1 111053633 rs527263305 C T no 553492
chr1 111053634 rs138922663 G A,T
MZF1
553493
chr1 111053767 rs569980088 A T
EBF1 ZBTB33
553494
Genes possibly regulated by vista2908[chr1:111053467-111053812]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 110993822 110999976 + PROK1 ENSG00000143125.5 110993822 1.0 0.99 1001 40355
chr1 111059839 111061797 - KCNA10 ENSG00000143105.5 111061797 0.98 0.0 1002 92015
Expression level of Genes
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miRNAs possibly regulated by vista2908[chr1:111053467-111053812]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results