EnhancerDB
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  3. vista2927[chr1:111230020-111230418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2927[chr1:111230020-111230418]
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Tissue distribution of vista2927
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Transcription factor that possibly regulate vista2927[chr1:111230020-111230418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 111230025 111230036 FOXA1 JASPAR yes 118350448
chr1 111230025 111230040 FOXA1 JASPAR yes 118350449
chr1 111230032 111230042 MSC JASPAR yes 118350450
chr1 111230032 111230042 MYF6 JASPAR yes 118350451
chr1 111230048 111230052 TEAD2 TRANSFAC yes 118350452
chr1 111230062 111230073 FOS JASPAR yes 118350453
chr1 111230062 111230073 FOSL1 JASPAR yes 118350454
chr1 111230062 111230073 JUND JASPAR yes 118350455
chr1 111230064 111230071 JUN TRANSFAC yes 118350456
chr1 111230070 111230077 SPIB JASPAR yes 118350457
chr1 111230070 111230080 ETV6 JASPAR yes 118350458
chr1 111230071 111230079 FEV JASPAR yes 118350459
chr1 111230086 111230100 POU1F1 JASPAR yes 118350460
chr1 111230087 111230099 POU3F2 JASPAR yes 118350461
chr1 111230087 111230100 POU3F3 JASPAR yes 118350462
chr1 111230088 111230100 POU2F1 JASPAR yes 118350463
chr1 111230089 111230098 POU3F4 JASPAR yes 118350464
chr1 111230089 111230098 POU5F1B JASPAR yes 118350465
chr1 111230106 111230121 RUNX2 JASPAR yes 118350466
chr1 111230109 111230115 SOX10 JASPAR yes 118350467
chr1 111230109 111230120 RUNX1 JASPAR yes 118350468
chr1 111230110 111230120 RUNX3 JASPAR yes 118350469
chr1 111230111 111230120 RUNX2 JASPAR yes 118350470
chr1 111230134 111230138 H1TF2 TRANSFAC yes 118350471
chr1 111230134 111230138 NFE TRANSFAC yes 118350472
chr1 111230134 111230138 SRF TRANSFAC yes 118350473
chr1 111230134 111230140 NFYC TRANSFAC yes 118350474
chr1 111230144 111230154 RORA JASPAR yes 118350475
chr1 111230149 111230153 ESR1 TRANSFAC yes 118350476
chr1 111230189 111230193 TEAD2 TRANSFAC yes 118350477
chr1 111230191 111230194 MYB TRANSFAC yes 118350478
chr1 111230203 111230218 JUND JASPAR yes 118350479
chr1 111230204 111230217 JUN JASPAR yes 118350480
chr1 111230211 111230215 YY1 TRANSFAC yes 118350481
chr1 111230214 111230229 MEF2C JASPAR yes 118350482
chr1 111230215 111230230 MEF2A JASPAR yes 118350483
chr1 111230221 111230232 CDX2 JASPAR yes 118350484
chr1 111230221 111230235 FOXF2 JASPAR yes 118350485
chr1 111230223 111230235 FOXC2 JASPAR yes 118350486
chr1 111230223 111230237 POU1F1 JASPAR yes 118350487
chr1 111230224 111230236 FOXI1 JASPAR yes 118350488
chr1 111230224 111230236 POU3F1 JASPAR yes 118350489
chr1 111230224 111230236 POU3F2 JASPAR yes 118350490
chr1 111230224 111230237 POU3F3 JASPAR yes 118350491
chr1 111230226 111230234 FOXG1 JASPAR yes 118350492
chr1 111230227 111230235 FOXL1 JASPAR yes 118350493
chr1 111230233 111230236 MYB TRANSFAC yes 118350494
chr1 111230265 111230278 HSF1 JASPAR yes 118350495
chr1 111230265 111230278 HSF4 JASPAR yes 118350496
chr1 111230268 111230283 AR JASPAR yes 118350497
chr1 111230293 111230303 HOXD13 JASPAR yes 118350498
chr1 111230293 111230304 HOXA10 JASPAR yes 118350499
chr1 111230294 111230304 ALX3 JASPAR yes 118350500
chr1 111230294 111230304 EMX1 JASPAR yes 118350501
chr1 111230294 111230304 EMX2 JASPAR yes 118350502
chr1 111230294 111230304 EVX2 JASPAR yes 118350503
chr1 111230294 111230304 GSX2 JASPAR yes 118350504
chr1 111230294 111230304 HOXB2 JASPAR yes 118350505
chr1 111230294 111230304 HOXB3 JASPAR yes 118350506
chr1 111230294 111230304 MEOX1 JASPAR yes 118350507
chr1 111230294 111230304 MEOX2 JASPAR yes 118350508
chr1 111230294 111230304 MIXL1 JASPAR yes 118350509
chr1 111230294 111230304 MNX1 JASPAR yes 118350510
chr1 111230294 111230304 RAX JASPAR yes 118350511
chr1 111230295 111230303 LMX1A JASPAR yes 118350512
chr1 111230295 111230303 LMX1B JASPAR yes 118350513
chr1 111230295 111230303 NKX6-1 JASPAR yes 118350514
chr1 111230295 111230303 NKX6-2 JASPAR yes 118350515
chr1 111230295 111230303 PDX1 JASPAR yes 118350516
chr1 111230295 111230303 VAX1 JASPAR yes 118350517
chr1 111230295 111230303 VAX2 JASPAR yes 118350518
chr1 111230295 111230303 VSX1 JASPAR yes 118350519
chr1 111230295 111230305 POU6F2 JASPAR yes 118350520
chr1 111230305 111230317 PBX1 JASPAR yes 118350521
chr1 111230332 111230347 SCRT1 JASPAR yes 118350522
chr1 111230333 111230353 TP53 JASPAR yes 118350523
chr1 111230344 111230352 FEV JASPAR yes 118350524
chr1 111230345 111230356 NFKB1 JASPAR yes 118350525
chr1 111230346 111230356 RELA JASPAR yes 118350526
chr1 111230346 111230356 REL JASPAR yes 118350527
chr1 111230349 111230364 MEF2C JASPAR yes 118350528
chr1 111230350 111230365 MEF2A JASPAR yes 118350529
chr1 111230360 111230371 DUX4 JASPAR yes 118350530
chr1 111230361 111230366 NFY TRANSFAC yes 118350531
chr1 111230361 111230382 IRF1 JASPAR yes 118350532
chr1 111230363 111230378 STAT2 JASPAR yes 118350533
chr1 111230365 111230377 IRF1 JASPAR yes 118350534
chr1 111230366 111230376 HOXA13 JASPAR yes 118350535
chr1 111230366 111230376 HOXB13 JASPAR yes 118350536
chr1 111230366 111230376 HOXD13 JASPAR yes 118350537
chr1 111230366 111230377 HOXA10 JASPAR yes 118350538
chr1 111230367 111230376 CDX1 JASPAR yes 118350539
chr1 111230367 111230378 CDX2 JASPAR yes 118350540
chr1 111230378 111230384 LEF1 TRANSFAC yes 118350541
chr1 111230378 111230384 SOX10 JASPAR yes 118350542
chr1 111230378 111230393 FOXP1 JASPAR yes 118350543
chr1 111230381 111230389 FOXO3 JASPAR yes 118350544
chr1 111230402 111230412 OLIG2 JASPAR yes 118350545
chr1 111230402 111230412 OLIG3 JASPAR yes 118350546
chr1 111230405 111230416 FOXC1 JASPAR yes 118350547
chr1 111230406 111230410 YY1 TRANSFAC yes 118350548
SNP sites on vista2927[chr1:111230020-111230418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 111230166 rs78627947 A G no 554650
chr1 111230188 rs114270307 A G no 554651
chr1 111230258 rs140799887 A G no 554652
chr1 111230336 rs149718881 C T
SCRT1 TP53
554653
chr1 111230400 rs147832047 A G no 554654
Genes possibly regulated by vista2927[chr1:111230020-111230418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111136202 111174096 - KCNA2 ENSG00000177301.9 111174096 0.92 1.0 1003 44076
chr1 111214310 111217655 - KCNA3 ENSG00000177272.7 111217655 0.98 1.0 1004 87635
Expression level of Genes
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miRNAs possibly regulated by vista2927[chr1:111230020-111230418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results