EnhancerDB
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  3. vista293[chr1:9271499-9271772]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista293[chr1:9271499-9271772]
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Tissue distribution of vista293
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Transcription factor that possibly regulate vista293[chr1:9271499-9271772]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 9271485 9271500 AR JASPAR yes 26630090
chr1 9271485 9271500 AR JASPAR yes 118227137
chr1 9271515 9271526 SPDEF JASPAR yes 26630091
chr1 9271515 9271526 SPDEF JASPAR yes 118227138
chr1 9271520 9271534 FOXF2 JASPAR yes 26630092
chr1 9271520 9271534 FOXF2 JASPAR yes 118227139
chr1 9271538 9271543 GATA2 JASPAR yes 26630093
chr1 9271538 9271543 GATA2 JASPAR yes 118227140
chr1 9271538 9271551 SCRT2 JASPAR yes 26630094
chr1 9271538 9271551 SCRT2 JASPAR yes 118227141
chr1 9271539 9271558 RFX2 JASPAR yes 26630095
chr1 9271539 9271558 RFX2 JASPAR yes 118227142
chr1 9271541 9271556 RFX5 JASPAR yes 26630096
chr1 9271541 9271556 RFX5 JASPAR yes 118227143
chr1 9271562 9271566 ESR1 TRANSFAC yes 26630097
chr1 9271562 9271566 ESR1 TRANSFAC yes 118227144
chr1 9271567 9271585 NFYA JASPAR yes 26630098
chr1 9271567 9271585 NFYA JASPAR yes 118227145
chr1 9271570 9271586 NFYA JASPAR yes 26630099
chr1 9271570 9271586 NFYA JASPAR yes 118227146
chr1 9271573 9271588 NFYB JASPAR yes 26630100
chr1 9271573 9271588 NFYB JASPAR yes 118227147
chr1 9271626 9271630 YY1 TRANSFAC yes 26630101
chr1 9271626 9271630 YY1 TRANSFAC yes 118227148
chr1 9271629 9271637 FOXL1 JASPAR yes 26630102
chr1 9271629 9271637 FOXL1 JASPAR yes 118227149
chr1 9271635 9271639 YY1 TRANSFAC yes 26630103
chr1 9271635 9271639 YY1 TRANSFAC yes 118227150
chr1 9271639 9271642 MYB TRANSFAC yes 26630104
chr1 9271639 9271642 MYB TRANSFAC yes 118227151
chr1 9271639 9271656 RARA JASPAR yes 26630105
chr1 9271639 9271656 RXRA JASPAR yes 26630106
chr1 9271639 9271656 RARA JASPAR yes 118227152
chr1 9271639 9271656 RXRA JASPAR yes 118227153
chr1 9271650 9271653 MYB TRANSFAC yes 26630107
chr1 9271650 9271653 MYB TRANSFAC yes 118227154
chr1 9271651 9271667 ZNF143 JASPAR yes 26630108
chr1 9271651 9271667 ZNF143 JASPAR yes 118227155
chr1 9271667 9271674 JUN TRANSFAC yes 26630109
chr1 9271667 9271674 JUN TRANSFAC yes 118227156
chr1 9271671 9271682 E2F6 JASPAR yes 26630110
chr1 9271671 9271682 E2F6 JASPAR yes 118227157
chr1 9271690 9271696 PEA3 TRANSFAC yes 26630111
chr1 9271690 9271696 PEA3 TRANSFAC yes 118227158
chr1 9271693 9271703 RELA JASPAR yes 26630112
chr1 9271693 9271703 RELA JASPAR yes 118227159
chr1 9271697 9271717 TP63 JASPAR yes 26630113
chr1 9271697 9271717 TP63 JASPAR yes 118227160
chr1 9271700 9271715 TP53 JASPAR yes 26630114
chr1 9271700 9271715 TP53 JASPAR yes 118227161
chr1 9271708 9271721 NR2F1 JASPAR yes 26630115
chr1 9271708 9271721 NR2F1 JASPAR yes 118227162
chr1 9271712 9271716 ESR1 TRANSFAC yes 26630116
chr1 9271712 9271716 ESR1 TRANSFAC yes 118227163
chr1 9271713 9271727 JUN JASPAR yes 26630117
chr1 9271713 9271727 JUN JASPAR yes 118227164
chr1 9271715 9271726 BATF JASPAR yes 26630118
chr1 9271715 9271726 BATF JASPAR yes 118227165
chr1 9271716 9271727 JUNB JASPAR yes 26630119
chr1 9271716 9271727 JUNB JASPAR yes 118227166
chr1 9271717 9271728 FOS JASPAR yes 26630120
chr1 9271717 9271728 FOSL1 JASPAR yes 26630121
chr1 9271717 9271728 FOS JASPAR yes 118227167
chr1 9271717 9271728 FOSL1 JASPAR yes 118227168
chr1 9271718 9271727 JDP2 JASPAR yes 26630122
chr1 9271718 9271727 JDP2 JASPAR yes 118227169
chr1 9271718 9271729 FOSL2 JASPAR yes 26630123
chr1 9271718 9271729 FOSL2 JASPAR yes 118227170
chr1 9271726 9271736 RORA JASPAR yes 26630124
chr1 9271726 9271736 RORA JASPAR yes 118227171
chr1 9271727 9271738 ESRRA JASPAR yes 26630125
chr1 9271727 9271738 ESRRA JASPAR yes 118227172
chr1 9271727 9271740 NR2F1 JASPAR yes 26630126
chr1 9271727 9271740 NR2F1 JASPAR yes 118227173
chr1 9271729 9271737 NR4A2 JASPAR yes 26630127
chr1 9271729 9271737 NR4A2 JASPAR yes 118227174
chr1 9271730 9271747 RXRA JASPAR yes 26630128
chr1 9271730 9271747 RXRA JASPAR yes 118227175
chr1 9271731 9271735 ESR1 TRANSFAC yes 26630129
chr1 9271731 9271735 ESR1 TRANSFAC yes 118227176
chr1 9271741 9271747 ETS1 JASPAR yes 26630130
chr1 9271741 9271747 ETS1 JASPAR yes 118227177
chr1 9271749 9271766 RXRA JASPAR yes 26630131
chr1 9271749 9271766 RXRA JASPAR yes 118227178
chr1 9271751 9271766 HNF4G JASPAR yes 26630132
chr1 9271751 9271766 HNF4G JASPAR yes 118227179
chr1 9271752 9271767 HNF4A JASPAR yes 26630133
chr1 9271752 9271767 HNF4A JASPAR yes 118227180
chr1 9271753 9271769 ZNF143 JASPAR yes 26630134
chr1 9271753 9271769 ZNF143 JASPAR yes 118227181
SNP sites on vista293[chr1:9271499-9271772]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 9271610 rs141827240 C T no 62766
chr1 9271635 rs12022253 A G
FOXL1 YY1
62767
chr1 9271649 rs114862258 C T
RARA RXRA
62768
chr1 9271749 rs185178962 C G,T
RXRA
62769
chr1 9271770 rs7538378 G A no 62770
Genes possibly regulated by vista293[chr1:9271499-9271772]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 9160364 9189229 - GPR157 ENSG00000180758.10 9189229 0.74 0.99 121 17730
chr1 9294834 9331396 + H6PD ENSG00000049239.8 9294834 0.77 1.0 122 76938
chr1 9352939 9429591 + SPSB1 ENSG00000171621.9 9352939 0.73 1.0 123 18833
Expression level of Genes
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miRNAs possibly regulated by vista293[chr1:9271499-9271772]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results