EnhancerDB
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  3. vista2933[chr1:111329904-111330079]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2933[chr1:111329904-111330079]
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Tissue distribution of vista2933
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Transcription factor that possibly regulate vista2933[chr1:111329904-111330079]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 111329820 111330125 RUNX3 UCSC Txn Factor no Conserved 107821610
chr1 111329906 111330081 TCF12 UCSC Txn Factor no Conserved 107821620
chr1 111329941 111329955 STAT1 JASPAR yes 31498656
chr1 111329941 111329955 STAT1 JASPAR yes 118350799
chr1 111329946 111329952 ETS1 JASPAR yes 31498657
chr1 111329946 111329952 ETS1 JASPAR yes 118350800
chr1 111329958 111329970 GLI2 JASPAR yes 31498658
chr1 111329958 111329970 GLI2 JASPAR yes 118350801
chr1 111329964 111329985 IRF1 JASPAR yes 31498659
chr1 111329964 111329985 IRF1 JASPAR yes 118350802
chr1 111329973 111329987 STAT1 JASPAR yes 31498660
chr1 111329973 111329987 STAT1 JASPAR yes 118350803
chr1 111329977 111329982 ETS2 TRANSFAC yes 31498661
chr1 111329977 111329982 ETS2 TRANSFAC yes 118350804
chr1 111329980 111329992 TAL1 JASPAR yes 31498662
chr1 111329980 111329992 TAL1 JASPAR yes 118350805
chr1 111329982 111329992 FIGLA JASPAR yes 31498663
chr1 111329982 111329992 ID4 JASPAR yes 31498664
chr1 111329982 111329992 MSC JASPAR yes 31498665
chr1 111329982 111329992 MYF6 JASPAR yes 31498666
chr1 111329982 111329992 TCF3 JASPAR yes 31498667
chr1 111329982 111329992 TCF4 JASPAR yes 31498668
chr1 111329982 111329992 FIGLA JASPAR yes 118350806
chr1 111329982 111329992 ID4 JASPAR yes 118350807
chr1 111329982 111329992 MSC JASPAR yes 118350808
chr1 111329982 111329992 MYF6 JASPAR yes 118350809
chr1 111329982 111329992 TCF3 JASPAR yes 118350810
chr1 111329982 111329992 TCF4 JASPAR yes 118350811
chr1 111329984 111329989 USF2 TRANSFAC yes 31498669
chr1 111329984 111329989 USF2 TRANSFAC yes 118350812
chr1 111329995 111330015 RREB1 JASPAR yes 31498670
chr1 111329995 111330015 RREB1 JASPAR yes 118350813
chr1 111329998 111330018 RREB1 JASPAR yes 31498671
chr1 111329998 111330018 RREB1 JASPAR yes 118350814
chr1 111329999 111330009 SP1 JASPAR yes 31498672
chr1 111329999 111330009 SP1 JASPAR yes 118350815
chr1 111330000 111330010 SP1 JASPAR yes 31498673
chr1 111330000 111330010 SP1 JASPAR yes 118350816
chr1 111330000 111330020 RREB1 JASPAR yes 31498674
chr1 111330000 111330020 RREB1 JASPAR yes 118350817
chr1 111330015 111330030 HSF1 JASPAR yes 31498675
chr1 111330015 111330030 HSF1 JASPAR yes 118350818
chr1 111330016 111330029 HSF1 JASPAR yes 31498676
chr1 111330016 111330029 HSF2 JASPAR yes 31498677
chr1 111330016 111330029 HSF4 JASPAR yes 31498678
chr1 111330016 111330029 HSF1 JASPAR yes 118350819
chr1 111330016 111330029 HSF2 JASPAR yes 118350820
chr1 111330016 111330029 HSF4 JASPAR yes 118350821
chr1 111330033 111330039 PEA3 TRANSFAC yes 31498679
chr1 111330033 111330039 PEA3 TRANSFAC yes 118350822
chr1 111330044 111330054 HOXA13 JASPAR yes 31498680
chr1 111330044 111330054 HOXB13 JASPAR yes 31498681
chr1 111330044 111330054 HOXD13 JASPAR yes 31498682
chr1 111330044 111330054 HOXA13 JASPAR yes 118350823
chr1 111330044 111330054 HOXB13 JASPAR yes 118350824
chr1 111330044 111330054 HOXD13 JASPAR yes 118350825
chr1 111330044 111330055 HOXA10 JASPAR yes 31498683
chr1 111330044 111330055 HOXA10 JASPAR yes 118350826
chr1 111330045 111330054 CDX1 JASPAR yes 31498684
chr1 111330045 111330054 CDX1 JASPAR yes 118350827
chr1 111330053 111330059 TCF4 TRANSFAC yes 31498685
chr1 111330053 111330059 TCF4 TRANSFAC yes 118350828
chr1 111330071 111330086 RFX5 JASPAR yes 31498686
chr1 111330071 111330086 RFX5 JASPAR yes 118350829
chr1 111330079 111330082 MYB TRANSFAC yes 31498687
chr1 111330079 111330082 MYB TRANSFAC yes 118350830
SNP sites on vista2933[chr1:111329904-111330079]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 111329949 rs141258207 G A
ETS1 RUNX3 STAT1 TCF12
555289
chr1 111329972 rs1494314 G C
IRF1 RUNX3 TCF12
555290
chr1 111330007 rs343808 C T
RREB1 RUNX3 SP1 TCF12
555291
Genes possibly regulated by vista2933[chr1:111329904-111330079]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 111415775 111442550 + CD53 ENSG00000143119.8 111415775 0.89 0.9 1005 14304
Expression level of Genes
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miRNAs possibly regulated by vista2933[chr1:111329904-111330079]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results