EnhancerDB
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  3. vista29338[chr19:39184148-39184440]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29338[chr19:39184148-39184440]
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Tissue distribution of vista29338
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Transcription factor that possibly regulate vista29338[chr19:39184148-39184440]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 39184140 39184495 EP300 UCSC Txn Factor no Conserved 108407487
chr19 39184184 39184196 FOXI1 JASPAR yes 70844354
chr19 39184184 39184196 FOXI1 JASPAR yes 113259326
chr19 39184241 39184249 SP1 TRANSFAC yes 70844355
chr19 39184241 39184249 SP1 TRANSFAC yes 113259327
chr19 39184243 39184249 MAZ TRANSFAC yes 70844356
chr19 39184243 39184249 MAZ TRANSFAC yes 113259328
chr19 39184243 39184254 E2F6 JASPAR yes 70844357
chr19 39184243 39184254 E2F6 JASPAR yes 113259329
chr19 39184247 39184260 HNF1B JASPAR yes 70844358
chr19 39184247 39184260 HNF1B JASPAR yes 113259330
chr19 39184247 39184263 POU4F2 JASPAR yes 70844359
chr19 39184247 39184263 POU4F3 JASPAR yes 70844360
chr19 39184247 39184263 POU4F2 JASPAR yes 113259331
chr19 39184247 39184263 POU4F3 JASPAR yes 113259332
chr19 39184260 39184271 FOSL2 JASPAR yes 70844361
chr19 39184260 39184271 FOSL2 JASPAR yes 113259333
chr19 39184261 39184272 NFE2 JASPAR yes 70844362
chr19 39184261 39184272 NFE2 JASPAR yes 113259334
chr19 39184264 39184274 POU6F2 JASPAR yes 70844363
chr19 39184264 39184274 POU6F2 JASPAR yes 113259335
chr19 39184265 39184275 GSX2 JASPAR yes 70844364
chr19 39184265 39184275 GSX2 JASPAR yes 113259336
chr19 39184265 39184276 HOXC13 JASPAR yes 70844365
chr19 39184265 39184276 HOXC13 JASPAR yes 113259337
chr19 39184266 39184274 NKX6-1 JASPAR yes 70844366
chr19 39184266 39184274 NKX6-2 JASPAR yes 70844367
chr19 39184266 39184274 NKX6-1 JASPAR yes 113259338
chr19 39184266 39184274 NKX6-2 JASPAR yes 113259339
chr19 39184268 39184272 YY1 TRANSFAC yes 70844368
chr19 39184268 39184272 YY1 TRANSFAC yes 113259340
chr19 39184285 39184306 REST JASPAR yes 70844369
chr19 39184285 39184306 REST JASPAR yes 113259341
chr19 39184287 39184297 TEAD1 JASPAR yes 70844370
chr19 39184287 39184297 TEAD4 JASPAR yes 70844371
chr19 39184287 39184297 TEAD1 JASPAR yes 113259342
chr19 39184287 39184297 TEAD4 JASPAR yes 113259343
chr19 39184287 39184299 TEAD1 JASPAR yes 70844372
chr19 39184287 39184299 TEAD1 JASPAR yes 113259344
chr19 39184288 39184296 TEAD3 JASPAR yes 70844373
chr19 39184288 39184296 TEAD3 JASPAR yes 113259345
chr19 39184305 39184309 ESR1 TRANSFAC yes 70844374
chr19 39184305 39184309 ESR1 TRANSFAC yes 113259346
chr19 39184317 39184333 SOX8 JASPAR yes 70844375
chr19 39184317 39184333 SOX8 JASPAR yes 113259347
chr19 39184321 39184333 PBX1 JASPAR yes 70844376
chr19 39184321 39184333 PBX1 JASPAR yes 113259348
chr19 39184322 39184327 GATA2 JASPAR yes 70844377
chr19 39184322 39184327 GATA2 JASPAR yes 113259349
chr19 39184325 39184337 PBX1 JASPAR yes 70844378
chr19 39184325 39184337 PBX1 JASPAR yes 113259350
chr19 39184326 39184340 POU4F1 JASPAR yes 70844379
chr19 39184326 39184340 POU4F1 JASPAR yes 113259351
chr19 39184327 39184340 HNF1B JASPAR yes 70844380
chr19 39184327 39184340 HNF1B JASPAR yes 113259352
chr19 39184343 39184348 SP1 TRANSFAC yes 70844381
chr19 39184343 39184348 SP1 TRANSFAC yes 113259353
chr19 39184343 39184349 SP1 TRANSFAC yes 70844382
chr19 39184343 39184349 SP1 TRANSFAC yes 113259354
chr19 39184362 39184372 SP1 JASPAR yes 70844383
chr19 39184362 39184372 SP1 JASPAR yes 113259355
chr19 39184364 39184370 MAZ TRANSFAC yes 70844384
chr19 39184364 39184370 MAZ TRANSFAC yes 113259356
chr19 39184368 39184386 ESR1 JASPAR yes 70844385
chr19 39184368 39184386 ESR1 JASPAR yes 113259357
chr19 39184370 39184374 H4TF2 TRANSFAC yes 70844386
chr19 39184370 39184374 H4TF2 TRANSFAC yes 113259358
chr19 39184382 39184393 FLI1 JASPAR yes 70844387
chr19 39184382 39184393 FLI1 JASPAR yes 113259359
chr19 39184383 39184391 EHF JASPAR yes 70844388
chr19 39184383 39184391 EHF JASPAR yes 113259360
chr19 39184391 39184401 HOXC10 JASPAR yes 70844389
chr19 39184391 39184401 HOXD11 JASPAR yes 70844390
chr19 39184391 39184401 HOXC10 JASPAR yes 113259361
chr19 39184391 39184401 HOXD11 JASPAR yes 113259362
chr19 39184391 39184402 HOXA10 JASPAR yes 70844391
chr19 39184391 39184402 HOXC11 JASPAR yes 70844392
chr19 39184391 39184402 HOXC12 JASPAR yes 70844393
chr19 39184391 39184402 HOXA10 JASPAR yes 113259363
chr19 39184391 39184402 HOXC11 JASPAR yes 113259364
chr19 39184391 39184402 HOXC12 JASPAR yes 113259365
chr19 39184392 39184401 CDX1 JASPAR yes 70844394
chr19 39184392 39184401 CDX1 JASPAR yes 113259366
chr19 39184392 39184403 CDX2 JASPAR yes 70844395
chr19 39184392 39184403 CDX2 JASPAR yes 113259367
chr19 39184406 39184426 ESR1 JASPAR yes 70844396
chr19 39184406 39184426 ESR1 JASPAR yes 113259368
chr19 39184417 39184430 SMAD2 JASPAR yes 70844397
chr19 39184417 39184430 SMAD2 JASPAR yes 113259369
chr19 39184419 39184430 E2F6 JASPAR yes 70844398
chr19 39184419 39184430 E2F6 JASPAR yes 113259370
chr19 39184431 39184446 RUNX2 JASPAR yes 70844399
chr19 39184431 39184446 RUNX2 JASPAR yes 113259371
chr19 39184440 39184451 NFE2L2 JASPAR yes 70844400
chr19 39184440 39184451 NFE2L2 JASPAR yes 113259372
SNP sites on vista29338[chr19:39184148-39184440]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29338[chr19:39184148-39184440]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39078281 39109522 - MAP4K1 ENSG00000104814.8 39109522 0.95 0.98 17486 25374
chr19 39109735 39127595 + EIF3K ENSG00000178982.5 39109735 0.58 1.0 17487 25587
chr19 39138289 39222223 + ACTN4 ENSG00000130402.7 39138289 0.77 1.0 17488 54141
chr19 39220827 39260544 - CAPN12 ENSG00000182472.4 39260544 0.86 1.0 17489 23896
chr19 39261611 39264132 - LGALS7 ENSG00000205076.4 39264132 0.97 0.97 17490 20308
chr19 39279851 39282389 + LGALS7B ENSG00000178934.4 39279851 0.99 0.99 17491 4589
Expression level of Genes
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miRNAs possibly regulated by vista29338[chr19:39184148-39184440]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results