EnhancerDB
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  3. vista29345[chr19:39550329-39550402]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29345[chr19:39550329-39550402]
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Tissue distribution of vista29345
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Transcription factor that possibly regulate vista29345[chr19:39550329-39550402]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 39550343 39550354 NFE2L2 JASPAR yes 70844528
chr19 39550343 39550354 NFE2L2 JASPAR yes 113275982
chr19 39550348 39550359 USF1 JASPAR yes 70844529
chr19 39550348 39550359 USF1 JASPAR yes 113275983
chr19 39550349 39550359 BHLHE22 JASPAR yes 70844530
chr19 39550349 39550359 OLIG2 JASPAR yes 70844531
chr19 39550349 39550359 BHLHE22 JASPAR yes 113275984
chr19 39550349 39550359 OLIG2 JASPAR yes 113275985
chr19 39550371 39550392 IRF1 JASPAR yes 70844532
chr19 39550371 39550392 IRF1 JASPAR yes 113275986
chr19 39550375 39550387 IRF1 JASPAR yes 70844533
chr19 39550375 39550387 IRF1 JASPAR yes 113275987
chr19 39550376 39550397 IRF1 JASPAR yes 70844534
chr19 39550376 39550397 IRF1 JASPAR yes 113275988
chr19 39550377 39550383 TCF4 TRANSFAC yes 70844535
chr19 39550377 39550383 TCF4 TRANSFAC yes 113275989
chr19 39550377 39550392 FOXP1 JASPAR yes 70844536
chr19 39550377 39550392 FOXP1 JASPAR yes 113275990
chr19 39550377 39550398 IRF1 JASPAR yes 70844537
chr19 39550377 39550398 IRF1 JASPAR yes 113275991
chr19 39550378 39550389 FOXP2 JASPAR yes 70844538
chr19 39550378 39550389 FOXP2 JASPAR yes 113275992
chr19 39550378 39550390 FOXC2 JASPAR yes 70844539
chr19 39550378 39550390 FOXC2 JASPAR yes 113275993
chr19 39550378 39550393 STAT2 JASPAR yes 70844540
chr19 39550378 39550393 STAT2 JASPAR yes 113275994
chr19 39550378 39550399 IRF1 JASPAR yes 70844541
chr19 39550378 39550399 IRF1 JASPAR yes 113275995
chr19 39550379 39550394 FOXP1 JASPAR yes 70844542
chr19 39550379 39550394 FOXP1 JASPAR yes 113275996
chr19 39550381 39550396 FOXP1 JASPAR yes 70844543
chr19 39550381 39550396 FOXP1 JASPAR yes 113275997
chr19 39550382 39550397 FOXP1 JASPAR yes 70844544
chr19 39550382 39550397 FOXP1 JASPAR yes 113275998
chr19 39550383 39550398 FOXP1 JASPAR yes 70844545
chr19 39550383 39550398 FOXP1 JASPAR yes 113275999
chr19 39550384 39550399 FOXP1 JASPAR yes 70844546
chr19 39550384 39550399 FOXP1 JASPAR yes 113276000
chr19 39550385 39550400 FOXP1 JASPAR yes 70844547
chr19 39550385 39550400 FOXP1 JASPAR yes 113276001
chr19 39550386 39550401 FOXP1 JASPAR yes 70844548
chr19 39550386 39550401 FOXP1 JASPAR yes 113276002
chr19 39550387 39550402 FOXP1 JASPAR yes 70844549
chr19 39550387 39550402 FOXP1 JASPAR yes 113276003
SNP sites on vista29345[chr19:39550329-39550402]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29345[chr19:39550329-39550402]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39432044 39466550 - FBXO17 ENSG00000269190.1 39466550 0.89 0.99 17503 16221
chr19 39481354 39523425 - FBXO27 ENSG00000161243.4 39523425 0.69 1.0 17504 73096
chr19 39574553 39602133 + PAPL ENSG00000183760.6 39574553 0.87 1.0 17505 75849
chr19 39616410 39673456 + PAK4 ENSG00000130669.13 39616410 0.84 1.0 17506 33992
Expression level of Genes
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miRNAs possibly regulated by vista29345[chr19:39550329-39550402]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results