EnhancerDB
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  3. vista29346[chr19:39564346-39564568]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29346[chr19:39564346-39564568]
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Tissue distribution of vista29346
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Transcription factor that possibly regulate vista29346[chr19:39564346-39564568]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 39564292 39564632 JUN UCSC Txn Factor no Conserved 108407836
chr19 39564319 39564602 FOSL2 UCSC Txn Factor no Conserved 108407840
chr19 39564326 39564598 FOS UCSC Txn Factor no Conserved 108407843
chr19 39564336 39564346 GABPA JASPAR yes 70844550
chr19 39564336 39564346 GABPA JASPAR yes 113277909
chr19 39564336 39564347 FLI1 JASPAR yes 70844551
chr19 39564336 39564347 FLI1 JASPAR yes 113277910
chr19 39564373 39564383 SREBF2 JASPAR yes 70844552
chr19 39564373 39564383 SREBF2 JASPAR yes 113277911
chr19 39564374 39564395 ZNF263 JASPAR yes 70844553
chr19 39564374 39564395 ZNF263 JASPAR yes 113277912
chr19 39564387 39564407 ESR1 JASPAR yes 70844554
chr19 39564387 39564407 ESR1 JASPAR yes 113277913
chr19 39564389 39564394 SP1 TRANSFAC yes 70844555
chr19 39564389 39564394 SP1 TRANSFAC yes 113277914
chr19 39564391 39564412 REST JASPAR yes 70844556
chr19 39564391 39564412 REST JASPAR yes 113277915
chr19 39564395 39564399 NFE TRANSFAC yes 70844557
chr19 39564395 39564399 NFE TRANSFAC yes 113277916
chr19 39564403 39564407 H4TF2 TRANSFAC yes 70844558
chr19 39564403 39564407 H4TF2 TRANSFAC yes 113277917
chr19 39564411 39564421 GABPA JASPAR yes 70844559
chr19 39564411 39564421 GABPA JASPAR yes 113277918
chr19 39564411 39564422 FLI1 JASPAR yes 70844560
chr19 39564411 39564422 FLI1 JASPAR yes 113277919
chr19 39564431 39564445 JUN JASPAR yes 70844561
chr19 39564431 39564445 JUN JASPAR yes 113277920
chr19 39564434 39564445 FOSL2 JASPAR yes 70844562
chr19 39564434 39564445 JUNB JASPAR yes 70844563
chr19 39564434 39564445 FOSL2 JASPAR yes 113277921
chr19 39564434 39564445 JUNB JASPAR yes 113277922
chr19 39564435 39564446 FOS JASPAR yes 70844564
chr19 39564435 39564446 FOSL1 JASPAR yes 70844565
chr19 39564435 39564446 JUND JASPAR yes 70844566
chr19 39564435 39564446 NFE2 JASPAR yes 70844567
chr19 39564435 39564446 FOS JASPAR yes 113277923
chr19 39564435 39564446 FOSL1 JASPAR yes 113277924
chr19 39564435 39564446 JUND JASPAR yes 113277925
chr19 39564435 39564446 NFE2 JASPAR yes 113277926
chr19 39564436 39564445 JDP2 JASPAR yes 70844568
chr19 39564436 39564445 JDP2 JASPAR yes 113277927
chr19 39564436 39564447 FOSL2 JASPAR yes 70844569
chr19 39564436 39564447 JUNB JASPAR yes 70844570
chr19 39564436 39564447 FOSL2 JASPAR yes 113277928
chr19 39564436 39564447 JUNB JASPAR yes 113277929
chr19 39564436 39564450 JUN JASPAR yes 70844571
chr19 39564436 39564450 JUN JASPAR yes 113277930
chr19 39564441 39564456 PRDM1 JASPAR yes 70844572
chr19 39564441 39564456 PRDM1 JASPAR yes 113277931
chr19 39564447 39564452 ETS2 TRANSFAC yes 70844573
chr19 39564447 39564452 ETS2 TRANSFAC yes 113277932
chr19 39564447 39564458 FLI1 JASPAR yes 70844574
chr19 39564447 39564458 FLI1 JASPAR yes 113277933
chr19 39564449 39564457 EHF JASPAR yes 70844575
chr19 39564449 39564457 EHF JASPAR yes 113277934
chr19 39564500 39564509 TFAP2A JASPAR yes 70844576
chr19 39564500 39564509 TFAP2A JASPAR yes 113277935
chr19 39564500 39564519 REST JASPAR yes 70844577
chr19 39564500 39564519 REST JASPAR yes 113277936
chr19 39564502 39564511 HIC2 JASPAR yes 70844578
chr19 39564502 39564511 HIC2 JASPAR yes 113277937
chr19 39564505 39564509 LFA1 TRANSFAC yes 70844579
chr19 39564505 39564509 LFA1 TRANSFAC yes 113277938
chr19 39564523 39564534 FOSL2 JASPAR yes 70844580
chr19 39564523 39564534 FOSL2 JASPAR yes 113277939
chr19 39564535 39564539 H4TF2 TRANSFAC yes 70844581
chr19 39564535 39564539 H4TF2 TRANSFAC yes 113277940
chr19 39564542 39564554 PKNOX1 JASPAR yes 70844582
chr19 39564542 39564554 PKNOX2 JASPAR yes 70844583
chr19 39564542 39564554 TGIF1 JASPAR yes 70844584
chr19 39564542 39564554 TGIF2 JASPAR yes 70844585
chr19 39564542 39564554 PKNOX1 JASPAR yes 113277941
chr19 39564542 39564554 PKNOX2 JASPAR yes 113277942
chr19 39564542 39564554 TGIF1 JASPAR yes 113277943
chr19 39564542 39564554 TGIF2 JASPAR yes 113277944
chr19 39564543 39564554 USF1 JASPAR yes 70844586
chr19 39564543 39564554 USF2 JASPAR yes 70844587
chr19 39564543 39564554 USF1 JASPAR yes 113277945
chr19 39564543 39564554 USF2 JASPAR yes 113277946
chr19 39564544 39564559 JUND JASPAR yes 70844588
chr19 39564544 39564559 JUND JASPAR yes 113277947
chr19 39564546 39564560 ATF7 JASPAR yes 70844589
chr19 39564546 39564560 BATF3 JASPAR yes 70844590
chr19 39564546 39564560 ATF7 JASPAR yes 113277948
chr19 39564546 39564560 BATF3 JASPAR yes 113277949
chr19 39564547 39564559 JDP2 JASPAR yes 70844591
chr19 39564547 39564559 JDP2 JASPAR yes 113277950
chr19 39564547 39564560 ATF4 JASPAR yes 70844592
chr19 39564547 39564560 ATF4 JASPAR yes 113277951
chr19 39564547 39564562 JUND JASPAR yes 70844593
chr19 39564547 39564562 JUND JASPAR yes 113277952
chr19 39564548 39564557 JUN TRANSFAC yes 70844594
chr19 39564548 39564557 JUN TRANSFAC yes 113277953
chr19 39564548 39564561 JUN JASPAR yes 70844595
chr19 39564548 39564561 JUN JASPAR yes 113277954
chr19 39564549 39564556 JUN TRANSFAC yes 70844596
chr19 39564549 39564556 JUN TRANSFAC yes 113277955
chr19 39564567 39564581 BATF3 JASPAR yes 70844597
chr19 39564567 39564581 BATF3 JASPAR yes 113277956
SNP sites on vista29346[chr19:39564346-39564568]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29346[chr19:39564346-39564568]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39432044 39466550 - FBXO17 ENSG00000269190.1 39466550 0.89 0.99 17503 2204
chr19 39481354 39523425 - FBXO27 ENSG00000161243.4 39523425 0.69 1.0 17504 59079
chr19 39574553 39602133 + PAPL ENSG00000183760.6 39574553 0.87 1.0 17505 90015
chr19 39616410 39673456 + PAK4 ENSG00000130669.13 39616410 0.84 1.0 17506 48158
Expression level of Genes
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miRNAs possibly regulated by vista29346[chr19:39564346-39564568]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results