EnhancerDB
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  3. vista29349[chr19:39627416-39627544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29349[chr19:39627416-39627544]
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Tissue distribution of vista29349
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Transcription factor that possibly regulate vista29349[chr19:39627416-39627544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 39627454 39627459 TFAP2A TRANSFAC yes 70844665
chr19 39627454 39627459 TFAP2A TRANSFAC yes 113281060
chr19 39627454 39627460 MZF1 JASPAR yes 70844666
chr19 39627454 39627460 MZF1 JASPAR yes 113281061
chr19 39627461 39627466 SP1 TRANSFAC yes 70844667
chr19 39627461 39627466 SP1 TRANSFAC yes 113281062
chr19 39627469 39627474 SP1 TRANSFAC yes 70844668
chr19 39627469 39627474 SP1 TRANSFAC yes 113281063
chr19 39627473 39627477 LFA1 TRANSFAC yes 70844669
chr19 39627473 39627477 LFA1 TRANSFAC yes 113281064
chr19 39627482 39627487 ETS2 TRANSFAC yes 70844670
chr19 39627482 39627487 ETS2 TRANSFAC yes 113281065
chr19 39627495 39627508 ELF1 JASPAR yes 70844671
chr19 39627495 39627508 ELF1 JASPAR yes 113281066
chr19 39627498 39627504 PEA3 TRANSFAC yes 70844672
chr19 39627498 39627504 PEA3 TRANSFAC yes 113281067
chr19 39627499 39627507 FEV JASPAR yes 70844673
chr19 39627499 39627507 FEV JASPAR yes 113281068
chr19 39627500 39627511 NFKB1 JASPAR yes 70844674
chr19 39627500 39627511 NFKB1 JASPAR yes 113281069
chr19 39627501 39627511 REL JASPAR yes 70844675
chr19 39627501 39627511 REL JASPAR yes 113281070
chr19 39627507 39627517 NKX2-3 JASPAR yes 70844676
chr19 39627507 39627517 NKX2-3 JASPAR yes 113281071
chr19 39627508 39627517 NKX2-8 JASPAR yes 70844677
chr19 39627508 39627517 NKX2-8 JASPAR yes 113281072
chr19 39627524 39627531 E2F1 TRANSFAC yes 70844678
chr19 39627524 39627531 E2F1 TRANSFAC yes 113281073
SNP sites on vista29349[chr19:39627416-39627544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29349[chr19:39627416-39627544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39574553 39602133 + PAPL ENSG00000183760.6 39574553 0.87 1.0 17505 47137
chr19 39616410 39673456 + PAK4 ENSG00000130669.13 39616410 0.84 1.0 17506 88994
chr19 39687601 39692524 + NCCRP1 ENSG00000188505.4 39687601 0.99 0.9 17507 39943
chr19 39693471 39694906 - SYCN ENSG00000179751.6 39694906 1.0 1.0 17508 32638
Expression level of Genes
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miRNAs possibly regulated by vista29349[chr19:39627416-39627544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results