EnhancerDB
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  3. vista29354[chr19:39828554-39828947]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29354[chr19:39828554-39828947]
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Tissue distribution of vista29354
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Transcription factor that possibly regulate vista29354[chr19:39828554-39828947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 39828543 39828554 FOSL2 JASPAR yes 70844842
chr19 39828543 39828554 JUNB JASPAR yes 70844843
chr19 39828543 39828554 FOSL2 JASPAR yes 113291610
chr19 39828543 39828554 JUNB JASPAR yes 113291611
chr19 39828543 39828557 JUN JASPAR yes 70844844
chr19 39828543 39828557 JUN JASPAR yes 113291612
chr19 39828563 39828575 YY1 JASPAR yes 70844845
chr19 39828563 39828575 YY1 JASPAR yes 113291613
chr19 39828588 39828593 GATA1 TRANSFAC yes 70844846
chr19 39828588 39828593 GATA1 TRANSFAC yes 113291614
chr19 39828595 39828599 NFE TRANSFAC yes 70844847
chr19 39828595 39828599 NFE TRANSFAC yes 113291615
chr19 39828597 39828609 NHLH1 JASPAR yes 70844848
chr19 39828597 39828609 NHLH1 JASPAR yes 113291616
chr19 39828598 39828608 MSC JASPAR yes 70844849
chr19 39828598 39828608 MSC JASPAR yes 113291617
chr19 39828607 39828618 NFE2L2 JASPAR yes 70844850
chr19 39828607 39828618 NFE2L2 JASPAR yes 113291618
chr19 39828610 39828621 BATF JASPAR yes 70844851
chr19 39828610 39828621 BATF JASPAR yes 113291619
chr19 39828614 39828625 FLI1 JASPAR yes 70844852
chr19 39828614 39828625 FLI1 JASPAR yes 113291620
chr19 39828615 39828619 YY1 TRANSFAC yes 70844853
chr19 39828615 39828619 YY1 TRANSFAC yes 113291621
chr19 39828616 39828624 FEV JASPAR yes 70844854
chr19 39828616 39828624 FEV JASPAR yes 113291622
chr19 39828618 39828623 ETS2 TRANSFAC yes 70844855
chr19 39828618 39828623 ETS2 TRANSFAC yes 113291623
chr19 39828619 39828633 SPI1 JASPAR yes 70844856
chr19 39828619 39828633 SPIC JASPAR yes 70844857
chr19 39828619 39828633 SPI1 JASPAR yes 113291624
chr19 39828619 39828633 SPIC JASPAR yes 113291625
chr19 39828637 39828642 H4TF1 TRANSFAC yes 70844858
chr19 39828637 39828642 H4TF1 TRANSFAC yes 113291626
chr19 39828654 39828664 SP1 JASPAR yes 70844859
chr19 39828654 39828664 SP1 JASPAR yes 113291627
chr19 39828660 39828671 FOSL2 JASPAR yes 70844860
chr19 39828660 39828671 FOSL2 JASPAR yes 113291628
chr19 39828661 39828672 NFE2 JASPAR yes 70844861
chr19 39828661 39828672 NFE2 JASPAR yes 113291629
chr19 39828676 39828697 LUN1 TRANSFAC yes 70844862
chr19 39828676 39828697 LUN1 TRANSFAC yes 113291630
chr19 39828693 39828707 PLAG1 JASPAR yes 70844863
chr19 39828693 39828707 PLAG1 JASPAR yes 113291631
chr19 39828700 39828705 SP1 TRANSFAC yes 70844864
chr19 39828700 39828705 SP1 TRANSFAC yes 113291632
chr19 39828701 39828706 SP1 TRANSFAC yes 70844865
chr19 39828701 39828706 SP1 TRANSFAC yes 113291633
chr19 39828705 39828722 RXRA JASPAR yes 70844866
chr19 39828705 39828722 RXRA JASPAR yes 113291634
chr19 39828706 39828712 ZNF354C JASPAR yes 70844867
chr19 39828706 39828712 ZNF354C JASPAR yes 113291635
chr19 39828713 39828726 NR2F1 JASPAR yes 70844868
chr19 39828713 39828726 NR2F1 JASPAR yes 113291636
chr19 39828717 39828721 ESR1 TRANSFAC yes 70844869
chr19 39828717 39828721 ESR1 TRANSFAC yes 113291637
chr19 39828743 39828746 MYB TRANSFAC yes 70844870
chr19 39828743 39828746 MYB TRANSFAC yes 113291638
chr19 39828748 39828761 NFKB1 JASPAR yes 70844871
chr19 39828748 39828761 NFKB2 JASPAR yes 70844872
chr19 39828748 39828761 NFKB1 JASPAR yes 113291639
chr19 39828748 39828761 NFKB2 JASPAR yes 113291640
chr19 39828764 39828779 MEF2C JASPAR yes 70844873
chr19 39828764 39828779 MEF2C JASPAR yes 113291641
chr19 39828765 39828780 MEF2A JASPAR yes 70844874
chr19 39828765 39828780 MEF2A JASPAR yes 113291642
chr19 39828766 39828778 MEF2A JASPAR yes 70844875
chr19 39828766 39828778 MEF2B JASPAR yes 70844876
chr19 39828766 39828778 MEF2D JASPAR yes 70844877
chr19 39828766 39828778 MEF2A JASPAR yes 113291643
chr19 39828766 39828778 MEF2B JASPAR yes 113291644
chr19 39828766 39828778 MEF2D JASPAR yes 113291645
chr19 39828779 39828798 PAX5 JASPAR yes 70844878
chr19 39828779 39828798 PAX5 JASPAR yes 113291646
chr19 39828788 39828798 SP1 JASPAR yes 70844879
chr19 39828788 39828798 SP1 JASPAR yes 113291647
chr19 39828797 39828809 HES7 JASPAR yes 70844880
chr19 39828797 39828809 PKNOX1 JASPAR yes 70844881
chr19 39828797 39828809 PKNOX2 JASPAR yes 70844882
chr19 39828797 39828809 TGIF2 JASPAR yes 70844883
chr19 39828797 39828809 HES7 JASPAR yes 113291648
chr19 39828797 39828809 PKNOX1 JASPAR yes 113291649
chr19 39828797 39828809 PKNOX2 JASPAR yes 113291650
chr19 39828797 39828809 TGIF2 JASPAR yes 113291651
chr19 39828798 39828807 SNAI2 JASPAR yes 70844884
chr19 39828798 39828807 SNAI2 JASPAR yes 113291652
chr19 39828798 39828808 HEY2 JASPAR yes 70844885
chr19 39828798 39828808 ID4 JASPAR yes 70844886
chr19 39828798 39828808 TCF4 JASPAR yes 70844887
chr19 39828798 39828808 HEY2 JASPAR yes 113291653
chr19 39828798 39828808 ID4 JASPAR yes 113291654
chr19 39828798 39828808 TCF4 JASPAR yes 113291655
chr19 39828818 39828830 HNF1B JASPAR yes 70844888
chr19 39828818 39828830 HNF1B JASPAR yes 113291656
chr19 39828826 39828847 ZNF263 JASPAR yes 70844889
chr19 39828826 39828847 ZNF263 JASPAR yes 113291657
chr19 39828829 39828850 ZNF263 JASPAR yes 70844890
chr19 39828829 39828850 ZNF263 JASPAR yes 113291658
chr19 39828844 39828854 SREBF2 JASPAR yes 70844891
chr19 39828844 39828854 SREBF2 JASPAR yes 113291659
chr19 39828858 39828868 SP1 JASPAR yes 70844892
chr19 39828858 39828868 SP1 JASPAR yes 113291660
chr19 39828860 39828865 SP1 TRANSFAC yes 70844893
chr19 39828860 39828865 SP1 TRANSFAC yes 113291661
chr19 39828869 39828883 TLX1 JASPAR yes 70844894
chr19 39828869 39828883 TLX1 JASPAR yes 113291662
chr19 39828883 39828894 CEBPB JASPAR yes 70844895
chr19 39828883 39828894 CEBPB JASPAR yes 113291663
chr19 39828884 39828894 CEBPB JASPAR yes 70844896
chr19 39828884 39828894 CEBPD JASPAR yes 70844897
chr19 39828884 39828894 CEBPE JASPAR yes 70844898
chr19 39828884 39828894 CEBPG JASPAR yes 70844899
chr19 39828884 39828894 CEBPB JASPAR yes 113291664
chr19 39828884 39828894 CEBPD JASPAR yes 113291665
chr19 39828884 39828894 CEBPE JASPAR yes 113291666
chr19 39828884 39828894 CEBPG JASPAR yes 113291667
chr19 39828893 39828908 HNF4A JASPAR yes 70844900
chr19 39828893 39828908 HNF4A JASPAR yes 113291668
chr19 39828918 39828930 PROX1 JASPAR yes 70844901
chr19 39828918 39828930 PROX1 JASPAR yes 113291669
chr19 39828929 39828944 FOXP1 JASPAR yes 70844902
chr19 39828929 39828944 FOXP1 JASPAR yes 113291670
chr19 39828930 39828945 FOXP1 JASPAR yes 70844903
chr19 39828930 39828945 FOXP1 JASPAR yes 113291671
chr19 39828931 39828946 FOXP1 JASPAR yes 70844904
chr19 39828931 39828946 FOXP1 JASPAR yes 113291672
chr19 39828932 39828947 FOXP1 JASPAR yes 70844905
chr19 39828932 39828947 FOXP1 JASPAR yes 113291673
chr19 39828934 39828949 FOXP1 JASPAR yes 70844906
chr19 39828934 39828949 FOXP1 JASPAR yes 113291674
chr19 39828946 39828951 H4TF1 TRANSFAC yes 70844907
chr19 39828946 39828951 H4TF1 TRANSFAC yes 113291675
SNP sites on vista29354[chr19:39828554-39828947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29354[chr19:39828554-39828947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39734246 39735646 - IFNL3 ENSG00000197110.4 39735646 0.0 1.0 17509 7092
chr19 39759154 39760732 + IFNL2 ENSG00000183709.7 39759154 0.99 0.0 17510 30600
chr19 39786965 39789313 + IFNL1 ENSG00000182393.2 39786965 0.9 1.0 17511 58411
chr19 39797208 39805976 - LRFN1 ENSG00000128011.4 39805976 0.84 1.0 17512 77422
chr19 39818993 39833012 - GMFG ENSG00000130755.8 39833012 0.88 0.91 17513 95935
chr19 39833036 39876350 + SAMD4B ENSG00000179134.10 39833036 0.72 1.0 17514 95911
chr19 39876492 39881835 - PAF1 ENSG00000006712.10 39881835 0.61 1.0 17515 47112
chr19 39881943 39891277 + MED29 ENSG00000063322.9 39881943 0.6 0.99 17516 47004
chr19 39897453 39900052 + ZFP36 ENSG00000128016.4 39897453 0.85 1.0 17517 31494
chr19 39903225 39919054 + PLEKHG2 ENSG00000090924.10 39903225 0.77 1.0 17518 25722
chr19 39923847 39926588 - RPS16 ENSG00000105193.4 39926588 0.78 1.0 17519 2359
chr19 39926796 39967310 + SUPT5H ENSG00000196235.9 39926796 0.55 1.0 17520 2151
Expression level of Genes
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miRNAs possibly regulated by vista29354[chr19:39828554-39828947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results