EnhancerDB
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  3. vista29359[chr19:39894353-39894945]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29359[chr19:39894353-39894945]
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Tissue distribution of vista29359
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Transcription factor that possibly regulate vista29359[chr19:39894353-39894945]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 39891624 39895042 POLR2A UCSC Txn Factor no Conserved 108408020
chr19 39891624 39895042 POLR2A UCSC Txn Factor no Conserved 108408021
chr19 39894007 39894632 ZNF263 UCSC Txn Factor no Conserved 108408151
chr19 39894057 39894383 BACH1 UCSC Txn Factor no Conserved 108408155
chr19 39894118 39894441 MAFK UCSC Txn Factor no Conserved 108408162
chr19 39894369 39894838 STAT3 UCSC Txn Factor no Conserved 108408197
chr19 39894380 39894844 MAZ UCSC Txn Factor no Conserved 108408199
chr19 39894427 39894792 STAT1 UCSC Txn Factor no Conserved 108408210
chr19 39894428 39894779 FOSL2 UCSC Txn Factor no Conserved 108408211
chr19 39894459 39894748 FOS UCSC Txn Factor no Conserved 108408224
chr19 39894476 39894736 JUND UCSC Txn Factor no Conserved 108408229
chr19 39894502 39894843 BHLHE40 UCSC Txn Factor no Conserved 108408241
chr19 39894506 39894799 RUNX3 UCSC Txn Factor no Conserved 108408244
chr19 39894525 39894783 CCNT2 UCSC Txn Factor no Conserved 108408258
chr19 39894534 39894735 FOSL1 UCSC Txn Factor no Conserved 108408262
chr19 39894396 39894408 INSM1 JASPAR yes 70845196
chr19 39894397 39894418 ZNF263 JASPAR yes 70845197
chr19 39894398 39894419 ZNF263 JASPAR yes 70845198
chr19 39894403 39894424 ZNF263 JASPAR yes 70845199
chr19 39894406 39894420 PLAG1 JASPAR yes 70845200
chr19 39894406 39894427 ZNF263 JASPAR yes 70845201
chr19 39894408 39894418 SP1 JASPAR yes 70845202
chr19 39894410 39894431 ZNF263 JASPAR yes 70845203
chr19 39894411 39894425 E2F7 JASPAR yes 70845204
chr19 39894413 39894423 SP1 JASPAR yes 70845205
chr19 39894414 39894420 SP1 TRANSFAC yes 70845206
chr19 39894414 39894424 SP1 JASPAR yes 70845207
chr19 39894462 39894467 SP1 TRANSFAC yes 70845208
chr19 39894463 39894468 SP1 TRANSFAC yes 70845209
chr19 39894467 39894471 H4TF2 TRANSFAC yes 70845210
chr19 39894467 39894488 ZNF263 JASPAR yes 70845211
chr19 39894474 39894478 H4TF2 TRANSFAC yes 70845212
chr19 39894475 39894485 MZF1 JASPAR yes 70845213
chr19 39894477 39894498 ZNF263 JASPAR yes 70845214
chr19 39894478 39894484 SP1 TRANSFAC yes 70845215
chr19 39894478 39894488 SP1 JASPAR yes 70845216
chr19 39894478 39894499 ZNF263 JASPAR yes 70845217
chr19 39894479 39894500 ZNF263 JASPAR yes 70845218
chr19 39894480 39894501 ZNF263 JASPAR yes 70845219
chr19 39894481 39894491 SP1 JASPAR yes 70845220
chr19 39894481 39894502 ZNF263 JASPAR yes 70845221
chr19 39894490 39894511 ZNF263 JASPAR yes 70845222
chr19 39894496 39894510 PLAG1 JASPAR yes 70845223
chr19 39894514 39894529 FOXP1 JASPAR yes 70845224
chr19 39894515 39894526 FOXP2 JASPAR yes 70845225
chr19 39894516 39894524 FOXD1 JASPAR yes 70845226
chr19 39894516 39894524 FOXO3 JASPAR yes 70845227
chr19 39894517 39894524 FOXD2 JASPAR yes 70845228
chr19 39894517 39894524 FOXI1 JASPAR yes 70845229
chr19 39894517 39894524 FOXL1 JASPAR yes 70845230
chr19 39894517 39894524 FOXO4 JASPAR yes 70845231
chr19 39894517 39894524 FOXO6 JASPAR yes 70845232
chr19 39894517 39894524 FOXP3 JASPAR yes 70845233
chr19 39894517 39894525 FOXO3 JASPAR yes 70845234
chr19 39894531 39894547 RFX4 JASPAR yes 70845235
chr19 39894532 39894551 RFX2 JASPAR yes 70845236
chr19 39894549 39894556 SPIB JASPAR yes 70845237
chr19 39894587 39894602 STAT1 JASPAR yes 70845238
chr19 39894589 39894600 STAT1 JASPAR yes 70845239
chr19 39894589 39894600 STAT3 JASPAR yes 70845240
chr19 39894592 39894599 ETS1 TRANSFAC yes 70845241
chr19 39894594 39894604 NFKB1 JASPAR yes 70845242
chr19 39894606 39894617 E2F4 JASPAR yes 70845243
chr19 39894608 39894617 SP1 TRANSFAC yes 70845244
chr19 39894609 39894615 SP1 TRANSFAC yes 70845245
chr19 39894609 39894619 SP1 JASPAR yes 70845246
chr19 39894610 39894617 SP1 TRANSFAC yes 70845247
chr19 39894611 39894616 SP1 TRANSFAC yes 70845248
chr19 39894611 39894617 SP1 TRANSFAC yes 70845249
chr19 39894619 39894633 JUN JASPAR yes 70845250
chr19 39894622 39894633 FOSL2 JASPAR yes 70845251
chr19 39894622 39894633 JUNB JASPAR yes 70845252
chr19 39894623 39894634 FOS JASPAR yes 70845253
chr19 39894623 39894634 FOSL1 JASPAR yes 70845254
chr19 39894623 39894634 JUND JASPAR yes 70845255
chr19 39894623 39894634 NFE2 JASPAR yes 70845256
chr19 39894624 39894633 JDP2 JASPAR yes 70845257
chr19 39894624 39894635 FOSL2 JASPAR yes 70845258
chr19 39894624 39894635 JUNB JASPAR yes 70845259
chr19 39894664 39894669 SP1 TRANSFAC yes 70845260
chr19 39894665 39894676 TFAP2A JASPAR yes 70845261
chr19 39894666 39894675 TFAP2A JASPAR yes 70845262
chr19 39894673 39894680 SP1 TRANSFAC yes 70845263
chr19 39894675 39894680 SP1 TRANSFAC yes 70845264
chr19 39894683 39894693 TFE3 JASPAR yes 70845265
chr19 39894699 39894704 ETS2 TRANSFAC yes 70845266
chr19 39894699 39894710 NFKB1 JASPAR yes 70845267
chr19 39894700 39894710 REL JASPAR yes 70845268
chr19 39894726 39894739 NFKB1 JASPAR yes 70845269
chr19 39894726 39894739 NFKB2 JASPAR yes 70845270
chr19 39894727 39894738 NFKB1 JASPAR yes 70845271
chr19 39894727 39894740 NFKB1 JASPAR yes 70845272
chr19 39894727 39894740 NFKB2 JASPAR yes 70845273
chr19 39894728 39894738 NFKB1 JASPAR yes 70845274
chr19 39894728 39894738 RELA JASPAR yes 70845275
chr19 39894733 39894743 ZNF740 JASPAR yes 70845276
chr19 39894733 39894747 ZIC1 JASPAR yes 70845277
chr19 39894733 39894748 ZIC3 JASPAR yes 70845278
chr19 39894733 39894748 ZIC4 JASPAR yes 70845279
chr19 39894734 39894744 SP1 JASPAR yes 70845280
chr19 39894737 39894743 SP1 TRANSFAC yes 70845281
chr19 39894785 39894791 MZF1 JASPAR yes 70845282
chr19 39894817 39894835 RARA JASPAR yes 70845283
chr19 39894820 39894834 RXRB JASPAR yes 70845284
chr19 39894820 39894834 RXRG JASPAR yes 70845285
chr19 39894820 39894835 HNF4G JASPAR yes 70845286
chr19 39894832 39894836 YY1 TRANSFAC yes 70845287
chr19 39894835 39894839 TEAD2 TRANSFAC yes 70845288
chr19 39894837 39894840 MYB TRANSFAC yes 70845289
chr19 39894857 39894862 H4TF1 TRANSFAC yes 70845290
chr19 39894871 39894875 YY1 TRANSFAC yes 70845291
chr19 39894877 39894897 ESR1 JASPAR yes 70845292
chr19 39894882 39894897 ESR2 JASPAR yes 70845293
chr19 39894883 39894887 LFA1 TRANSFAC yes 70845294
SNP sites on vista29359[chr19:39894353-39894945]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29359[chr19:39894353-39894945]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39797208 39805976 - LRFN1 ENSG00000128011.4 39805976 0.84 1.0 17512 11623
chr19 39818993 39833012 - GMFG ENSG00000130755.8 39833012 0.88 0.91 17513 38659
chr19 39833036 39876350 + SAMD4B ENSG00000179134.10 39833036 0.72 1.0 17514 38683
chr19 39876492 39881835 - PAF1 ENSG00000006712.10 39881835 0.61 1.0 17515 87482
chr19 39881943 39891277 + MED29 ENSG00000063322.9 39881943 0.6 0.99 17516 87590
chr19 39897453 39900052 + ZFP36 ENSG00000128016.4 39897453 0.85 1.0 17517 97492
chr19 39903225 39919054 + PLEKHG2 ENSG00000090924.10 39903225 0.77 1.0 17518 91720
chr19 39923847 39926588 - RPS16 ENSG00000105193.4 39926588 0.78 1.0 17519 68357
chr19 39926796 39967310 + SUPT5H ENSG00000196235.9 39926796 0.55 1.0 17520 68149
chr19 39930212 39932082 + AC011500.1 ENSG00000213922.1 39930212 0.92 0.0 17521 64733
chr19 39971052 39984422 + TIMM50 ENSG00000105197.6 39971052 0.76 0.99 17522 23893
chr19 39989535 39999121 + DLL3 ENSG00000090932.6 39989535 0.88 0.91 17523 5410
Expression level of Genes
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miRNAs possibly regulated by vista29359[chr19:39894353-39894945]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results