EnhancerDB
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  3. vista29362[chr19:40042107-40042358]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29362[chr19:40042107-40042358]
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Tissue distribution of vista29362
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Transcription factor that possibly regulate vista29362[chr19:40042107-40042358]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40042067 40042427 CTCF UCSC Txn Factor no Conserved 108408408
chr19 40042110 40042399 SMC3 UCSC Txn Factor no Conserved 108408413
chr19 40042137 40042401 RAD21 UCSC Txn Factor no Conserved 108408418
chr19 40042098 40042110 PKNOX1 JASPAR yes 70845405
chr19 40042098 40042110 PKNOX2 JASPAR yes 70845406
chr19 40042098 40042110 TGIF1 JASPAR yes 70845407
chr19 40042098 40042110 TGIF2 JASPAR yes 70845408
chr19 40042098 40042110 PKNOX1 JASPAR yes 113297431
chr19 40042098 40042110 PKNOX2 JASPAR yes 113297432
chr19 40042098 40042110 TGIF1 JASPAR yes 113297433
chr19 40042098 40042110 TGIF2 JASPAR yes 113297434
chr19 40042099 40042109 FIGLA JASPAR yes 70845409
chr19 40042099 40042109 ID4 JASPAR yes 70845410
chr19 40042099 40042109 FIGLA JASPAR yes 113297435
chr19 40042099 40042109 ID4 JASPAR yes 113297436
chr19 40042100 40042109 SNAI2 JASPAR yes 70845411
chr19 40042100 40042109 SNAI2 JASPAR yes 113297437
chr19 40042103 40042111 MEIS2 JASPAR yes 70845412
chr19 40042103 40042111 MEIS3 JASPAR yes 70845413
chr19 40042103 40042111 MEIS2 JASPAR yes 113297439
chr19 40042103 40042111 MEIS3 JASPAR yes 113297440
chr19 40042104 40042108 NFE TRANSFAC yes 70845414
chr19 40042104 40042108 NFE TRANSFAC yes 113297441
chr19 40042104 40042111 MEIS1 JASPAR yes 70845415
chr19 40042104 40042111 MEIS1 JASPAR yes 113297442
chr19 40042107 40042122 FOXP1 JASPAR yes 70845416
chr19 40042107 40042122 FOXP1 JASPAR yes 113297443
chr19 40042108 40042123 FOXP1 JASPAR yes 70845417
chr19 40042108 40042123 FOXP1 JASPAR yes 113297444
chr19 40042108 40042129 IRF1 JASPAR yes 70845418
chr19 40042108 40042129 IRF1 JASPAR yes 113297445
chr19 40042109 40042124 FOXP1 JASPAR yes 70845419
chr19 40042109 40042124 FOXP1 JASPAR yes 113297446
chr19 40042109 40042130 IRF1 JASPAR yes 70845420
chr19 40042109 40042130 IRF1 JASPAR yes 113297447
chr19 40042110 40042125 FOXP1 JASPAR yes 70845421
chr19 40042110 40042125 FOXP1 JASPAR yes 113297448
chr19 40042110 40042131 IRF1 JASPAR yes 70845422
chr19 40042110 40042131 IRF1 JASPAR yes 113297449
chr19 40042111 40042126 FOXP1 JASPAR yes 70845423
chr19 40042111 40042126 FOXP1 JASPAR yes 113297450
chr19 40042111 40042132 IRF1 JASPAR yes 70845424
chr19 40042111 40042132 IRF1 JASPAR yes 113297451
chr19 40042112 40042127 FOXP1 JASPAR yes 70845425
chr19 40042112 40042127 FOXP1 JASPAR yes 113297452
chr19 40042112 40042133 IRF1 JASPAR yes 70845426
chr19 40042112 40042133 IRF1 JASPAR yes 113297453
chr19 40042113 40042128 FOXP1 JASPAR yes 70845427
chr19 40042113 40042128 FOXP1 JASPAR yes 113297454
chr19 40042113 40042134 IRF1 JASPAR yes 70845428
chr19 40042113 40042134 IRF1 JASPAR yes 113297455
chr19 40042114 40042129 FOXP1 JASPAR yes 70845429
chr19 40042114 40042129 FOXP1 JASPAR yes 113297456
chr19 40042114 40042135 IRF1 JASPAR yes 70845430
chr19 40042114 40042135 IRF1 JASPAR yes 113297457
chr19 40042115 40042130 FOXP1 JASPAR yes 70845431
chr19 40042115 40042130 FOXP1 JASPAR yes 113297458
chr19 40042115 40042136 IRF1 JASPAR yes 70845432
chr19 40042115 40042136 IRF1 JASPAR yes 113297459
chr19 40042116 40042131 FOXP1 JASPAR yes 70845433
chr19 40042116 40042131 FOXP1 JASPAR yes 113297460
chr19 40042116 40042137 IRF1 JASPAR yes 70845434
chr19 40042116 40042137 IRF1 JASPAR yes 113297461
chr19 40042117 40042132 FOXP1 JASPAR yes 70845435
chr19 40042117 40042132 FOXP1 JASPAR yes 113297462
chr19 40042117 40042138 IRF1 JASPAR yes 70845436
chr19 40042117 40042138 IRF1 JASPAR yes 113297463
chr19 40042118 40042133 FOXP1 JASPAR yes 70845437
chr19 40042118 40042133 FOXP1 JASPAR yes 113297464
chr19 40042118 40042139 IRF1 JASPAR yes 70845438
chr19 40042118 40042139 IRF1 JASPAR yes 113297465
chr19 40042119 40042134 FOXP1 JASPAR yes 70845439
chr19 40042119 40042134 FOXP1 JASPAR yes 113297466
chr19 40042121 40042136 FOXP1 JASPAR yes 70845440
chr19 40042121 40042136 FOXP1 JASPAR yes 113297467
chr19 40042145 40042161 ZNF143 JASPAR yes 70845441
chr19 40042145 40042161 ZNF143 JASPAR yes 113297468
chr19 40042148 40042159 SPDEF JASPAR yes 70845442
chr19 40042148 40042159 SPDEF JASPAR yes 113297469
chr19 40042158 40042161 MYB TRANSFAC yes 70845443
chr19 40042158 40042161 MYB TRANSFAC yes 113297470
chr19 40042169 40042180 FOXH1 JASPAR yes 70845444
chr19 40042169 40042180 FOXH1 JASPAR yes 113297471
chr19 40042173 40042179 ZNF354C JASPAR yes 70845445
chr19 40042173 40042179 ZNF354C JASPAR yes 113297472
chr19 40042196 40042201 TFAP2A TRANSFAC yes 70845446
chr19 40042196 40042201 TFAP2A TRANSFAC yes 113297473
chr19 40042196 40042202 MZF1 JASPAR yes 70845447
chr19 40042196 40042202 MZF1 JASPAR yes 113297474
chr19 40042212 40042217 MYC TRANSFAC yes 70845448
chr19 40042212 40042217 MYC TRANSFAC yes 113297475
chr19 40042220 40042239 REST JASPAR yes 70845449
chr19 40042220 40042239 REST JASPAR yes 113297476
chr19 40042232 40042236 NFE TRANSFAC yes 70845450
chr19 40042232 40042236 NFE TRANSFAC yes 113297477
chr19 40042238 40042242 ESR1 TRANSFAC yes 70845451
chr19 40042238 40042242 ESR1 TRANSFAC yes 113297478
chr19 40042246 40042265 CTCF JASPAR yes 70845452
chr19 40042246 40042265 CTCF JASPAR yes 113297479
chr19 40042249 40042268 CTCF JASPAR yes 70845453
chr19 40042249 40042268 CTCF JASPAR yes 113297480
chr19 40042258 40042277 PAX5 JASPAR yes 70845454
chr19 40042258 40042277 PAX5 JASPAR yes 113297481
chr19 40042260 40042264 LFA1 TRANSFAC yes 70845455
chr19 40042260 40042264 LFA1 TRANSFAC yes 113297482
chr19 40042302 40042316 RORA JASPAR yes 70845456
chr19 40042302 40042316 RORA JASPAR yes 113297483
chr19 40042316 40042320 NFE TRANSFAC yes 70845457
chr19 40042316 40042320 NFE TRANSFAC yes 113297484
chr19 40042316 40042321 GATA1 TRANSFAC yes 70845458
chr19 40042316 40042321 GATA1 TRANSFAC yes 113297485
chr19 40042316 40042322 GATA3 JASPAR yes 70845459
chr19 40042316 40042322 GATA3 JASPAR yes 113297486
chr19 40042328 40042334 GATA3 JASPAR yes 70845460
chr19 40042328 40042334 GATA3 JASPAR yes 113297487
chr19 40042330 40042351 IRF1 JASPAR yes 70845461
chr19 40042330 40042351 IRF1 JASPAR yes 113297488
chr19 40042331 40042346 FOXP1 JASPAR yes 70845462
chr19 40042331 40042346 FOXP1 JASPAR yes 113297489
chr19 40042331 40042352 IRF1 JASPAR yes 70845463
chr19 40042331 40042352 IRF1 JASPAR yes 113297490
chr19 40042335 40042350 FOXP1 JASPAR yes 70845464
chr19 40042335 40042350 FOXP1 JASPAR yes 113297491
chr19 40042335 40042356 IRF1 JASPAR yes 70845465
chr19 40042335 40042356 IRF1 JASPAR yes 113297492
chr19 40042336 40042351 FOXP1 JASPAR yes 70845466
chr19 40042336 40042351 FOXP1 JASPAR yes 113297493
chr19 40042336 40042357 IRF1 JASPAR yes 70845467
chr19 40042336 40042357 IRF1 JASPAR yes 113297494
chr19 40042337 40042352 FOXP1 JASPAR yes 70845468
chr19 40042337 40042352 FOXP1 JASPAR yes 113297495
chr19 40042337 40042358 IRF1 JASPAR yes 70845469
chr19 40042337 40042358 IRF1 JASPAR yes 113297496
chr19 40042340 40042361 ZNF263 JASPAR yes 70845470
chr19 40042340 40042361 ZNF263 JASPAR yes 113297497
chr19 40042341 40042362 IRF1 JASPAR yes 70845471
chr19 40042341 40042362 IRF1 JASPAR yes 113297498
chr19 40042342 40042357 FOXP1 JASPAR yes 70845472
chr19 40042342 40042357 FOXP1 JASPAR yes 113297499
chr19 40042342 40042363 IRF1 JASPAR yes 70845473
chr19 40042342 40042363 IRF1 JASPAR yes 113297500
chr19 40042343 40042358 STAT2 JASPAR yes 70845474
chr19 40042343 40042358 STAT2 JASPAR yes 113297501
chr19 40042343 40042364 ZNF263 JASPAR yes 70845475
chr19 40042343 40042364 ZNF263 JASPAR yes 113297502
chr19 40042347 40042362 FOXP1 JASPAR yes 70845476
chr19 40042347 40042362 FOXP1 JASPAR yes 113297503
chr19 40042348 40042369 IRF1 JASPAR yes 70845477
chr19 40042348 40042369 IRF1 JASPAR yes 113297504
chr19 40042351 40042365 SPIC JASPAR yes 70845478
chr19 40042351 40042365 SPIC JASPAR yes 113297505
chr19 40042354 40042361 SPIB JASPAR yes 70845479
chr19 40042354 40042361 SPIB JASPAR yes 113297506
chr19 40042354 40042375 IRF1 JASPAR yes 70845480
chr19 40042354 40042375 IRF1 JASPAR yes 113297507
SNP sites on vista29362[chr19:40042107-40042358]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29362[chr19:40042107-40042358]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39971052 39984422 + TIMM50 ENSG00000105197.6 39971052 0.76 0.99 17522 28945
chr19 39989535 39999121 + DLL3 ENSG00000090932.6 39989535 0.88 0.91 17523 47428
chr19 40005753 40011326 + SELV ENSG00000186838.9 40005753 0.96 0.92 17524 63646
chr19 40021630 40023494 - EID2B ENSG00000176401.5 40023494 0.71 0.94 17525 81387
chr19 40028890 40030870 - EID2 ENSG00000176396.9 40030870 0.54 0.98 17526 88763
chr19 40093164 40098116 + LGALS13 ENSG00000105198.6 40093164 1.0 0.0 17527 49194
Expression level of Genes
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miRNAs possibly regulated by vista29362[chr19:40042107-40042358]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results