EnhancerDB
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  3. vista29364[chr19:40048143-40048260]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29364[chr19:40048143-40048260]
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Tissue distribution of vista29364
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Transcription factor that possibly regulate vista29364[chr19:40048143-40048260]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40048152 40048164 NHLH1 JASPAR yes 70845527
chr19 40048152 40048164 NHLH1 JASPAR yes 113298252
chr19 40048153 40048163 NHLH1 JASPAR yes 70845528
chr19 40048153 40048163 NHLH1 JASPAR yes 113298253
chr19 40048164 40048171 NFATC2 JASPAR yes 70845529
chr19 40048164 40048171 NFATC2 JASPAR yes 113298254
chr19 40048178 40048195 BCL6B JASPAR yes 70845530
chr19 40048178 40048195 BCL6B JASPAR yes 113298255
chr19 40048188 40048198 RORA JASPAR yes 70845531
chr19 40048188 40048198 RORA JASPAR yes 113298256
chr19 40048189 40048200 ESRRA JASPAR yes 70845532
chr19 40048189 40048200 ESRRA JASPAR yes 113298257
chr19 40048189 40048202 NR2F1 JASPAR yes 70845533
chr19 40048189 40048202 NR2F1 JASPAR yes 113298258
chr19 40048191 40048199 NR4A2 JASPAR yes 70845534
chr19 40048191 40048199 NR4A2 JASPAR yes 113298259
chr19 40048192 40048207 ESR2 JASPAR yes 70845535
chr19 40048192 40048207 ESR2 JASPAR yes 113298260
chr19 40048193 40048197 ESR1 TRANSFAC yes 70845536
chr19 40048193 40048197 ESR1 TRANSFAC yes 113298261
chr19 40048197 40048207 TFEB JASPAR yes 70845537
chr19 40048197 40048207 TFEC JASPAR yes 70845538
chr19 40048197 40048207 TFEB JASPAR yes 113298262
chr19 40048197 40048207 TFEC JASPAR yes 113298263
chr19 40048197 40048208 USF1 JASPAR yes 70845539
chr19 40048197 40048208 USF2 JASPAR yes 70845540
chr19 40048197 40048208 USF1 JASPAR yes 113298264
chr19 40048197 40048208 USF2 JASPAR yes 113298265
chr19 40048198 40048208 MAX JASPAR yes 70845541
chr19 40048198 40048208 MAX JASPAR yes 113298266
chr19 40048202 40048213 NFE2L2 JASPAR yes 70845542
chr19 40048202 40048213 NFE2L2 JASPAR yes 113298267
chr19 40048242 40048247 MYB TRANSFAC yes 70845543
chr19 40048242 40048247 MYB TRANSFAC yes 113298268
SNP sites on vista29364[chr19:40048143-40048260]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29364[chr19:40048143-40048260]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39971052 39984422 + TIMM50 ENSG00000105197.6 39971052 0.76 0.99 17522 22909
chr19 39989535 39999121 + DLL3 ENSG00000090932.6 39989535 0.88 0.91 17523 41392
chr19 40005753 40011326 + SELV ENSG00000186838.9 40005753 0.96 0.92 17524 57610
chr19 40021630 40023494 - EID2B ENSG00000176401.5 40023494 0.71 0.94 17525 75351
chr19 40028890 40030870 - EID2 ENSG00000176396.9 40030870 0.54 0.98 17526 82727
chr19 40093164 40098116 + LGALS13 ENSG00000105198.6 40093164 1.0 0.0 17527 55096
chr19 40146534 40151287 + LGALS16 ENSG00000249861.3 40146534 1.0 0.0 17528 1726
Expression level of Genes
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miRNAs possibly regulated by vista29364[chr19:40048143-40048260]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results