EnhancerDB
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  3. vista29365[chr19:40048579-40048977]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29365[chr19:40048579-40048977]
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Tissue distribution of vista29365
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Transcription factor that possibly regulate vista29365[chr19:40048579-40048977]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40048501 40048865 IRF1 UCSC Txn Factor no Conserved 108408443
chr19 40048590 40048736 PRDM1 UCSC Txn Factor no Conserved 108408445
chr19 40048587 40048593 MZF1 JASPAR yes 70845544
chr19 40048587 40048593 MZF1 JASPAR yes 113298317
chr19 40048591 40048610 CTCF JASPAR yes 70845545
chr19 40048591 40048610 CTCF JASPAR yes 113298318
chr19 40048608 40048612 YY1 TRANSFAC yes 70845546
chr19 40048608 40048612 YY1 TRANSFAC yes 113298319
chr19 40048613 40048617 ESR1 TRANSFAC yes 70845547
chr19 40048613 40048617 ESR1 TRANSFAC yes 113298320
chr19 40048625 40048636 CEBPA JASPAR yes 70845548
chr19 40048625 40048636 CEBPA JASPAR yes 113298321
chr19 40048657 40048664 MEIS1 JASPAR yes 70845549
chr19 40048657 40048664 MEIS1 JASPAR yes 113298322
chr19 40048657 40048665 MEIS2 JASPAR yes 70845550
chr19 40048657 40048665 MEIS2 JASPAR yes 113298323
chr19 40048671 40048689 IRF2 JASPAR yes 70845551
chr19 40048671 40048689 IRF2 JASPAR yes 113298324
chr19 40048672 40048693 IRF1 JASPAR yes 70845552
chr19 40048672 40048693 IRF1 JASPAR yes 113298325
chr19 40048674 40048689 PRDM1 JASPAR yes 70845553
chr19 40048674 40048689 STAT2 JASPAR yes 70845554
chr19 40048674 40048689 PRDM1 JASPAR yes 113298326
chr19 40048674 40048689 STAT2 JASPAR yes 113298327
chr19 40048675 40048689 STAT1 JASPAR yes 70845555
chr19 40048675 40048689 STAT1 JASPAR yes 113298328
chr19 40048676 40048688 IRF1 JASPAR yes 70845556
chr19 40048676 40048688 IRF1 JASPAR yes 113298329
chr19 40048676 40048690 IRF7 JASPAR yes 70845557
chr19 40048676 40048690 IRF8 JASPAR yes 70845558
chr19 40048676 40048690 IRF7 JASPAR yes 113298330
chr19 40048676 40048690 IRF8 JASPAR yes 113298331
chr19 40048676 40048691 IRF9 JASPAR yes 70845559
chr19 40048676 40048691 IRF9 JASPAR yes 113298332
chr19 40048688 40048694 GATA3 JASPAR yes 70845560
chr19 40048688 40048694 GATA3 JASPAR yes 113298333
chr19 40048717 40048729 FOXI1 JASPAR yes 70845561
chr19 40048717 40048729 FOXI1 JASPAR yes 113298334
chr19 40048727 40048745 IRF2 JASPAR yes 70845562
chr19 40048727 40048745 IRF2 JASPAR yes 113298335
chr19 40048728 40048749 IRF1 JASPAR yes 70845563
chr19 40048728 40048749 IRF1 JASPAR yes 113298336
chr19 40048729 40048735 TCF4 TRANSFAC yes 70845564
chr19 40048729 40048735 TCF4 TRANSFAC yes 113298337
chr19 40048730 40048742 FOXC2 JASPAR yes 70845565
chr19 40048730 40048742 FOXC2 JASPAR yes 113298338
chr19 40048730 40048745 STAT2 JASPAR yes 70845566
chr19 40048730 40048745 STAT2 JASPAR yes 113298339
chr19 40048731 40048745 STAT1 JASPAR yes 70845567
chr19 40048731 40048745 STAT1 JASPAR yes 113298340
chr19 40048735 40048740 ETS2 TRANSFAC yes 70845568
chr19 40048735 40048740 ETS2 TRANSFAC yes 113298341
chr19 40048756 40048771 STAT1 JASPAR yes 70845569
chr19 40048756 40048771 STAT1 JASPAR yes 113298342
chr19 40048758 40048769 STAT3 JASPAR yes 70845570
chr19 40048758 40048769 STAT3 JASPAR yes 113298343
chr19 40048779 40048786 SPIB JASPAR yes 70845571
chr19 40048779 40048786 SPIB JASPAR yes 113298344
chr19 40048789 40048800 CEBPA JASPAR yes 70845572
chr19 40048789 40048800 CEBPA JASPAR yes 113298345
chr19 40048790 40048800 CEBPD JASPAR yes 70845573
chr19 40048790 40048800 CEBPD JASPAR yes 113298346
chr19 40048791 40048802 NFIL3 JASPAR yes 70845574
chr19 40048791 40048802 NFIL3 JASPAR yes 113298347
chr19 40048797 40048805 HOXA5 JASPAR yes 70845575
chr19 40048797 40048805 HOXA5 JASPAR yes 113298348
chr19 40048797 40048815 MAFF JASPAR yes 70845576
chr19 40048797 40048815 MAFF JASPAR yes 113298349
chr19 40048799 40048814 MAFK JASPAR yes 70845577
chr19 40048799 40048814 MAFK JASPAR yes 113298350
chr19 40048822 40048826 NFE TRANSFAC yes 70845578
chr19 40048822 40048826 NFE TRANSFAC yes 113298351
chr19 40048822 40048827 GATA1 TRANSFAC yes 70845579
chr19 40048822 40048827 GATA1 TRANSFAC yes 113298352
chr19 40048822 40048828 GATA3 JASPAR yes 70845580
chr19 40048822 40048828 GATA3 JASPAR yes 113298353
chr19 40048834 40048838 YY1 TRANSFAC yes 70845581
chr19 40048834 40048838 YY1 TRANSFAC yes 113298354
chr19 40048837 40048852 PRDM1 JASPAR yes 70845582
chr19 40048837 40048852 PRDM1 JASPAR yes 113298355
chr19 40048838 40048852 TCF7L2 JASPAR yes 70845583
chr19 40048838 40048852 TCF7L2 JASPAR yes 113298356
chr19 40048838 40048853 LEF1 JASPAR yes 70845584
chr19 40048838 40048853 LEF1 JASPAR yes 113298357
chr19 40048841 40048856 IRF9 JASPAR yes 70845585
chr19 40048841 40048856 IRF9 JASPAR yes 113298358
chr19 40048842 40048848 TCF4 TRANSFAC yes 70845586
chr19 40048842 40048848 TCF4 TRANSFAC yes 113298359
chr19 40048842 40048856 IRF8 JASPAR yes 70845587
chr19 40048842 40048856 IRF8 JASPAR yes 113298360
chr19 40048858 40048873 SCRT1 JASPAR yes 70845588
chr19 40048858 40048873 SCRT1 JASPAR yes 113298361
chr19 40048859 40048869 CLOCK JASPAR yes 70845589
chr19 40048859 40048869 MYF6 JASPAR yes 70845590
chr19 40048859 40048869 CLOCK JASPAR yes 113298362
chr19 40048859 40048869 MYF6 JASPAR yes 113298363
chr19 40048862 40048874 FOXI1 JASPAR yes 70845591
chr19 40048862 40048874 FOXI1 JASPAR yes 113298364
chr19 40048863 40048874 FOXP2 JASPAR yes 70845592
chr19 40048863 40048874 FOXP2 JASPAR yes 113298365
chr19 40048863 40048877 FOXF2 JASPAR yes 70845593
chr19 40048863 40048877 FOXF2 JASPAR yes 113298366
chr19 40048864 40048872 FOXG1 JASPAR yes 70845594
chr19 40048864 40048872 FOXO3 JASPAR yes 70845595
chr19 40048864 40048872 FOXG1 JASPAR yes 113298367
chr19 40048864 40048872 FOXO3 JASPAR yes 113298368
chr19 40048865 40048876 FOXA1 JASPAR yes 70845596
chr19 40048865 40048876 FOXH1 JASPAR yes 70845597
chr19 40048865 40048876 FOXA1 JASPAR yes 113298369
chr19 40048865 40048876 FOXH1 JASPAR yes 113298370
chr19 40048916 40048925 THAP1 JASPAR yes 70845598
chr19 40048916 40048925 THAP1 JASPAR yes 113298371
chr19 40048928 40048942 E2F7 JASPAR yes 70845599
chr19 40048928 40048942 E2F7 JASPAR yes 113298372
chr19 40048932 40048937 SP1 TRANSFAC yes 70845600
chr19 40048932 40048937 SP1 TRANSFAC yes 113298373
chr19 40048946 40048958 PBX1 JASPAR yes 70845601
chr19 40048946 40048958 PBX1 JASPAR yes 113298374
chr19 40048954 40048968 ONECUT2 JASPAR yes 70845602
chr19 40048954 40048968 ONECUT2 JASPAR yes 113298375
chr19 40048958 40048974 POU4F2 JASPAR yes 70845603
chr19 40048958 40048974 POU4F3 JASPAR yes 70845604
chr19 40048958 40048974 POU4F2 JASPAR yes 113298376
chr19 40048958 40048974 POU4F3 JASPAR yes 113298377
chr19 40048968 40048974 TCF4 TRANSFAC yes 70845605
chr19 40048968 40048974 TCF4 TRANSFAC yes 113298378
SNP sites on vista29365[chr19:40048579-40048977]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29365[chr19:40048579-40048977]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 39971052 39984422 + TIMM50 ENSG00000105197.6 39971052 0.76 0.99 17522 22473
chr19 39989535 39999121 + DLL3 ENSG00000090932.6 39989535 0.88 0.91 17523 40956
chr19 40005753 40011326 + SELV ENSG00000186838.9 40005753 0.96 0.92 17524 57174
chr19 40021630 40023494 - EID2B ENSG00000176401.5 40023494 0.71 0.94 17525 74915
chr19 40028890 40030870 - EID2 ENSG00000176396.9 40030870 0.54 0.98 17526 82291
chr19 40093164 40098116 + LGALS13 ENSG00000105198.6 40093164 1.0 0.0 17527 55813
chr19 40146534 40151287 + LGALS16 ENSG00000249861.3 40146534 1.0 0.0 17528 2443
Expression level of Genes
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miRNAs possibly regulated by vista29365[chr19:40048579-40048977]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results