EnhancerDB
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  3. vista29369[chr19:40166744-40166863]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29369[chr19:40166744-40166863]
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Tissue distribution of vista29369
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Transcription factor that possibly regulate vista29369[chr19:40166744-40166863]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 40166671 40166919 BATF UCSC Txn Factor no Conserved 108408462
chr19 40166762 40166769 NKX3-1 JASPAR yes 70845697
chr19 40166762 40166769 NKX3-1 JASPAR yes 113305572
chr19 40166778 40166785 NKX3-1 JASPAR yes 70845698
chr19 40166778 40166785 NKX3-1 JASPAR yes 113305573
chr19 40166810 40166821 BATF JASPAR yes 70845699
chr19 40166810 40166821 BATF JASPAR yes 113305574
chr19 40166811 40166822 FOSL2 JASPAR yes 70845700
chr19 40166811 40166822 JUNB JASPAR yes 70845701
chr19 40166811 40166822 FOSL2 JASPAR yes 113305575
chr19 40166811 40166822 JUNB JASPAR yes 113305576
chr19 40166812 40166823 FOS JASPAR yes 70845702
chr19 40166812 40166823 FOSL1 JASPAR yes 70845703
chr19 40166812 40166823 FOS JASPAR yes 113305577
chr19 40166812 40166823 FOSL1 JASPAR yes 113305578
chr19 40166813 40166824 NFE2L2 JASPAR yes 70845704
chr19 40166813 40166824 NFE2L2 JASPAR yes 113305579
chr19 40166838 40166855 BCL6B JASPAR yes 70845705
chr19 40166838 40166855 BCL6B JASPAR yes 113305580
chr19 40166841 40166847 NFIC JASPAR yes 70845706
chr19 40166841 40166847 NFIC JASPAR yes 113305581
chr19 40166841 40166854 ELF1 JASPAR yes 70845707
chr19 40166841 40166854 ELF1 JASPAR yes 113305582
chr19 40166844 40166854 ERF JASPAR yes 70845708
chr19 40166844 40166854 ETS1 JASPAR yes 70845709
chr19 40166844 40166854 ETV6 JASPAR yes 70845710
chr19 40166844 40166854 GABPA JASPAR yes 70845711
chr19 40166844 40166854 ERF JASPAR yes 113305583
chr19 40166844 40166854 ETS1 JASPAR yes 113305584
chr19 40166844 40166854 ETV6 JASPAR yes 113305585
chr19 40166844 40166854 GABPA JASPAR yes 113305586
chr19 40166844 40166855 ELK4 JASPAR yes 70845712
chr19 40166844 40166855 FLI1 JASPAR yes 70845713
chr19 40166844 40166855 ELK4 JASPAR yes 113305587
chr19 40166844 40166855 FLI1 JASPAR yes 113305588
chr19 40166845 40166853 EHF JASPAR yes 70845714
chr19 40166845 40166853 FEV JASPAR yes 70845715
chr19 40166845 40166853 EHF JASPAR yes 113305589
chr19 40166845 40166853 FEV JASPAR yes 113305590
chr19 40166846 40166853 SPI1 JASPAR yes 70845716
chr19 40166846 40166853 SPI1 JASPAR yes 113305591
chr19 40166846 40166864 MAFF JASPAR yes 70845717
chr19 40166846 40166864 MAFF JASPAR yes 113305592
chr19 40166848 40166859 NRL JASPAR yes 70845718
chr19 40166848 40166859 NRL JASPAR yes 113305593
chr19 40166848 40166863 MAFK JASPAR yes 70845719
chr19 40166848 40166863 MAFK JASPAR yes 113305594
SNP sites on vista29369[chr19:40166744-40166863]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29369[chr19:40166744-40166863]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 40093164 40098116 + LGALS13 ENSG00000105198.6 40093164 1.0 0.0 17527 26420
chr19 40146534 40151287 + LGALS16 ENSG00000249861.3 40146534 1.0 0.0 17528 79790
chr19 40194946 40200084 + LGALS14 ENSG00000006659.8 40194946 0.99 0.98 17529 71917
chr19 40221890 40228668 - CLC ENSG00000105205.6 40228668 0.99 1.0 17530 38195
Expression level of Genes
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miRNAs possibly regulated by vista29369[chr19:40166744-40166863]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results